RNA–Protein interactions for RNA: ENST00000550380.5

LINC02407-201, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 4

Gene LINC02407, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-201ENST00000550380 NGDNQ8NEJ9 315 aaKnown RBP16.82■□□□□ 0.28
LINC02407-201ENST00000550380 ZNF335Q9H4Z2 1342 aaPredicted RBP16.81■□□□□ 0.28
LINC02407-201ENST00000550380 FYB1O15117 783 aa16.81■□□□□ 0.28
LINC02407-201ENST00000550380 LTBP4Q8N2S1 1624 aa16.81■□□□□ 0.28
LINC02407-201ENST00000550380 MRS2Q9HD23 443 aa16.8■□□□□ 0.28
LINC02407-201ENST00000550380 TTC21BQ7Z4L5 1316 aa16.79■□□□□ 0.28
LINC02407-201ENST00000550380 PPP2R1AP30153 589 aa16.79■□□□□ 0.28
LINC02407-201ENST00000550380 KIF24Q5T7B8 1368 aa16.78■□□□□ 0.28
LINC02407-201ENST00000550380 OVOS2A0A0J9YW53 1432 aa16.78■□□□□ 0.28
LINC02407-201ENST00000550380 OVOS2Q6IE36 1432 aa16.78■□□□□ 0.28
LINC02407-201ENST00000550380 SMG6Q86US8 1419 aaKnown RBP16.78■□□□□ 0.28
LINC02407-201ENST00000550380 COG3Q96JB2 828 aa16.77■□□□□ 0.28
LINC02407-201ENST00000550380 ESCO1Q5FWF5 840 aa16.76■□□□□ 0.27
LINC02407-201ENST00000550380 PIK3C2AO00443 1686 aa16.75■□□□□ 0.27
LINC02407-201ENST00000550380 NPHP3Q7Z494 1330 aa16.75■□□□□ 0.27
LINC02407-201ENST00000550380 PSME1Q06323 249 aa16.75■□□□□ 0.27
LINC02407-201ENST00000550380 CFAP53Q96M91 514 aa16.75■□□□□ 0.27
LINC02407-201ENST00000550380 TRPM3Q9HCF6 1732 aaPredicted RBP16.75■□□□□ 0.27
LINC02407-201ENST00000550380 SBNO1A3KN83 1393 aa16.75■□□□□ 0.27
LINC02407-201ENST00000550380 PNISRQ8TF01 805 aaKnown RBP16.74■□□□□ 0.27
LINC02407-201ENST00000550380 PNPLA6Q8IY17 1366 aa16.73■□□□□ 0.27
LINC02407-201ENST00000550380 CDK12Q9NYV4 1490 aaPredicted RBP16.73■□□□□ 0.27
LINC02407-201ENST00000550380 MAP2P11137 1827 aaKnown RBP16.73■□□□□ 0.27
LINC02407-201ENST00000550380 PHRF1Q9P1Y6 1649 aaKnown RBP16.72■□□□□ 0.27
LINC02407-201ENST00000550380 PMFBP1Q8TBY8 1022 aa16.72■□□□□ 0.27
LINC02407-201ENST00000550380 NHSL1Q5SYE7 1610 aa16.71■□□□□ 0.27
LINC02407-201ENST00000550380 NUTM2FA1L443 756 aa16.71■□□□□ 0.27
LINC02407-201ENST00000550380 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.71■□□□□ 0.27
LINC02407-201ENST00000550380 SLAIN2Q9P270 581 aa16.71■□□□□ 0.27
LINC02407-201ENST00000550380 ALS2Q96Q42 1657 aa16.71■□□□□ 0.27
LINC02407-201ENST00000550380 NGEFQ8N5V2 710 aa16.7■□□□□ 0.26
LINC02407-201ENST00000550380 GGNBP2Q9H3C7 697 aa16.7■□□□□ 0.26
LINC02407-201ENST00000550380 MARF1Q9Y4F3 1742 aaKnown RBP16.7■□□□□ 0.26
LINC02407-201ENST00000550380 ARHGEF10O15013 1369 aa16.69■□□□□ 0.26
LINC02407-201ENST00000550380 KCNH5Q8NCM2 988 aa16.69■□□□□ 0.26
LINC02407-201ENST00000550380 RBM33Q96EV2 1170 aaKnown RBP16.69■□□□□ 0.26
LINC02407-201ENST00000550380 ABCC6O95255 1503 aa16.69■□□□□ 0.26
LINC02407-201ENST00000550380 MED1Q15648 1581 aaPredicted RBP16.68■□□□□ 0.26
LINC02407-201ENST00000550380 RTL1A6NKG5 1358 aa16.68■□□□□ 0.26
LINC02407-201ENST00000550380 NME9Q86XW9 330 aa16.68■□□□□ 0.26
LINC02407-201ENST00000550380 PXDNQ92626 1479 aa16.67■□□□□ 0.26
LINC02407-201ENST00000550380 SLIT3O75094 1523 aa16.67■□□□□ 0.26
LINC02407-201ENST00000550380 ORAI2Q96SN7 254 aa16.67■□□□□ 0.26
LINC02407-201ENST00000550380 CENPBP07199 599 aaPredicted RBP16.66■□□□□ 0.26
LINC02407-201ENST00000550380 MTHFSP49914 203 aa16.66■□□□□ 0.26
LINC02407-201ENST00000550380 BLMP54132 1417 aaPredicted RBP16.66■□□□□ 0.26
LINC02407-201ENST00000550380 WDR43Q15061 677 aaKnown RBP eCLIP16.66■□□□□ 0.26
LINC02407-201ENST00000550380 NCBP3Q53F19 620 aaKnown RBP16.66■□□□□ 0.26
LINC02407-201ENST00000550380 TNS3Q68CZ2 1445 aa16.66■□□□□ 0.26
LINC02407-201ENST00000550380 ABTB2Q8N961 1025 aa16.66■□□□□ 0.26
LINC02407-201ENST00000550380 NUDCQ9Y266 331 aa16.66■□□□□ 0.26
LINC02407-201ENST00000550380 AHDC1Q5TGY3 1603 aaPredicted RBP16.66■□□□□ 0.26
LINC02407-201ENST00000550380 COL3A1P02461 1466 aaPredicted RBP16.66■□□□□ 0.26
LINC02407-201ENST00000550380 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
LINC02407-201ENST00000550380 BRINP3Q76B58 766 aa16.65■□□□□ 0.26
LINC02407-201ENST00000550380 PNNQ9H307 717 aaKnown RBP16.65■□□□□ 0.26
LINC02407-201ENST00000550380 SOS2Q07890 1332 aaPredicted RBP16.65■□□□□ 0.26
LINC02407-201ENST00000550380 FOXO3O43524 673 aa16.64■□□□□ 0.25
LINC02407-201ENST00000550380 KRT28Q7Z3Y7 464 aa16.64■□□□□ 0.25
LINC02407-201ENST00000550380 USP19O94966 1318 aa16.64■□□□□ 0.25
LINC02407-201ENST00000550380 NLRP6P59044 892 aa16.63■□□□□ 0.25
LINC02407-201ENST00000550380 POLKQ9UBT6 870 aa16.63■□□□□ 0.25
LINC02407-201ENST00000550380 FLT4P35916 1363 aa16.63■□□□□ 0.25
LINC02407-201ENST00000550380 NFAT5O94916 1531 aa16.62■□□□□ 0.25
LINC02407-201ENST00000550380 CCDC184Q52MB2 194 aa16.62■□□□□ 0.25
LINC02407-201ENST00000550380 TOM1O60784 492 aa16.61■□□□□ 0.25
LINC02407-201ENST00000550380 PAK3O75914 559 aaPredicted RBP16.61■□□□□ 0.25
LINC02407-201ENST00000550380 ZBED9Q6R2W3 1325 aa16.61■□□□□ 0.25
LINC02407-201ENST00000550380 ROBO1Q9Y6N7 1651 aa16.6■□□□□ 0.25
LINC02407-201ENST00000550380 LTN1O94822 1766 aa16.6■□□□□ 0.25
LINC02407-201ENST00000550380 CNGB1Q14028 1251 aaPredicted RBP16.6■□□□□ 0.25
LINC02407-201ENST00000550380 FAM9BQ8IZU0 186 aa16.6■□□□□ 0.25
LINC02407-201ENST00000550380 SPATA31A3Q5VYP0 1347 aa16.6■□□□□ 0.25
LINC02407-201ENST00000550380 CRYBG1Q9Y4K1 1723 aa16.59■□□□□ 0.25
LINC02407-201ENST00000550380 DIAPH1O60610 1272 aaKnown RBP16.59■□□□□ 0.25
LINC02407-201ENST00000550380 PLEKHG2Q9H7P9 1386 aa16.58■□□□□ 0.24
LINC02407-201ENST00000550380 TNNT2P45379 298 aaPredicted RBP16.57■□□□□ 0.24
LINC02407-201ENST00000550380 COL22A1Q8NFW1 1626 aaPredicted RBP16.56■□□□□ 0.24
LINC02407-201ENST00000550380 FAM208AQ9UK61 1670 aaKnown RBP16.56■□□□□ 0.24
LINC02407-201ENST00000550380 CPDO75976 1380 aa16.55■□□□□ 0.24
LINC02407-201ENST00000550380 ADAMTS8Q9UP79 889 aa16.55■□□□□ 0.24
LINC02407-201ENST00000550380 RGPD1P0DJD0 1748 aa16.55■□□□□ 0.24
LINC02407-201ENST00000550380 PEAK1Q9H792 1746 aa16.55■□□□□ 0.24
LINC02407-201ENST00000550380 MAP3K19Q56UN5 1328 aa16.54■□□□□ 0.24
LINC02407-201ENST00000550380 FCHSD2O94868 740 aa16.54■□□□□ 0.24
LINC02407-201ENST00000550380 HNRNPUQ00839 825 aaKnown RBP eCLIP16.54■□□□□ 0.24
LINC02407-201ENST00000550380 GCP02774 474 aa16.53■□□□□ 0.24
LINC02407-201ENST00000550380 PDE3BQ13370 1112 aa16.53■□□□□ 0.24
LINC02407-201ENST00000550380 LRRC59Q96AG4 307 aaKnown RBP16.53■□□□□ 0.24
LINC02407-201ENST00000550380 NEFMP07197 916 aa16.52■□□□□ 0.24
LINC02407-201ENST00000550380 RUNDC1Q96C34 613 aa16.52■□□□□ 0.24
LINC02407-201ENST00000550380 ZRANB1Q9UGI0 708 aa16.52■□□□□ 0.24
LINC02407-201ENST00000550380 EMILIN1Q9Y6C2 1016 aa16.52■□□□□ 0.24
LINC02407-201ENST00000550380 ABCA3Q99758 1704 aa16.52■□□□□ 0.24
LINC02407-201ENST00000550380 IL13P35225 146 aa16.51■□□□□ 0.23
LINC02407-201ENST00000550380 AMPHP49418 695 aa16.51■□□□□ 0.23
LINC02407-201ENST00000550380 IP6K1Q92551 441 aa16.51■□□□□ 0.23
LINC02407-201ENST00000550380 ARHGEF25Q86VW2 580 aa16.5■□□□□ 0.23
LINC02407-201ENST00000550380 YTHDC1Q96MU7 727 aaKnown RBP16.5■□□□□ 0.23
LINC02407-201ENST00000550380 PHLPP1O60346 1717 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms