RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 ATP7BP35670 1465 aa27.47■■□□□ 1.99
PRDM4-205ENST00000550376 ARHGAP23Q9P227 1491 aa27.46■■□□□ 1.99
PRDM4-205ENST00000550376 E9PSI1 815 aa27.46■■□□□ 1.99
PRDM4-205ENST00000550376 CRBNQ96SW2 442 aa27.46■■□□□ 1.99
PRDM4-205ENST00000550376 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.46■■□□□ 1.99
PRDM4-205ENST00000550376 PMFBP1Q8TBY8 1022 aa27.45■■□□□ 1.98
PRDM4-205ENST00000550376 SLIT1O75093 1534 aa27.45■■□□□ 1.98
PRDM4-205ENST00000550376 BCAR3O75815 825 aa27.45■■□□□ 1.98
PRDM4-205ENST00000550376 DIAPH1O60610 1272 aaKnown RBP27.44■■□□□ 1.98
PRDM4-205ENST00000550376 RRS1Q15050 365 aaKnown RBP27.44■■□□□ 1.98
PRDM4-205ENST00000550376 KCNA6P17658 529 aa27.43■■□□□ 1.98
PRDM4-205ENST00000550376 ACEP12821 1306 aa27.43■■□□□ 1.98
PRDM4-205ENST00000550376 KNDC1Q76NI1 1749 aa27.42■■□□□ 1.98
PRDM4-205ENST00000550376 RIMS1Q86UR5 1692 aaKnown RBP27.42■■□□□ 1.98
PRDM4-205ENST00000550376 PLEKHF1Q96S99 279 aa27.41■■□□□ 1.98
PRDM4-205ENST00000550376 EDC4Q6P2E9 1401 aaKnown RBP27.41■■□□□ 1.98
PRDM4-205ENST00000550376 SOX12O15370 315 aa27.4■■□□□ 1.98
PRDM4-205ENST00000550376 COL3A1P02461 1466 aaPredicted RBP27.4■■□□□ 1.98
PRDM4-205ENST00000550376 COG3Q96JB2 828 aa27.39■■□□□ 1.98
PRDM4-205ENST00000550376 RBM19Q9Y4C8 960 aaKnown RBP27.39■■□□□ 1.98
PRDM4-205ENST00000550376 HMOX1P09601 288 aa27.38■■□□□ 1.97
PRDM4-205ENST00000550376 IQSEC2Q5JU85 1478 aa27.38■■□□□ 1.97
PRDM4-205ENST00000550376 KIF20BQ96Q89 1820 aa27.37■■□□□ 1.97
PRDM4-205ENST00000550376 NKTRP30414 1462 aaKnown RBP27.37■■□□□ 1.97
PRDM4-205ENST00000550376 PHF23Q9BUL5 403 aaPredicted RBP27.36■■□□□ 1.97
PRDM4-205ENST00000550376 ZNF692Q9BU19 519 aaPredicted RBP27.36■■□□□ 1.97
PRDM4-205ENST00000550376 ANKRD26Q9UPS8 1709 aa27.35■■□□□ 1.97
PRDM4-205ENST00000550376 NGEFQ8N5V2 710 aa27.35■■□□□ 1.97
PRDM4-205ENST00000550376 PNPLA6Q8IY17 1366 aa27.35■■□□□ 1.97
PRDM4-205ENST00000550376 CDC42BPGQ6DT37 1551 aa27.34■■□□□ 1.97
PRDM4-205ENST00000550376 TMPOP42166 694 aaKnown RBP27.34■■□□□ 1.97
PRDM4-205ENST00000550376 CEP170BQ9Y4F5 1589 aaPredicted RBP27.34■■□□□ 1.97
PRDM4-205ENST00000550376 TTC21BQ7Z4L5 1316 aa27.33■■□□□ 1.97
PRDM4-205ENST00000550376 MAPK8IP3Q9UPT6 1336 aa27.33■■□□□ 1.97
PRDM4-205ENST00000550376 ANKLE2Q86XL3 938 aa27.33■■□□□ 1.97
PRDM4-205ENST00000550376 TSR2Q969E8 191 aaKnown RBP27.32■■□□□ 1.96
PRDM4-205ENST00000550376 PLEKHG3A1L390 1219 aa27.31■■□□□ 1.96
PRDM4-205ENST00000550376 PRKAR2BP31323 418 aa27.31■■□□□ 1.96
PRDM4-205ENST00000550376 BCL2L13Q9BXK5 485 aa27.31■■□□□ 1.96
PRDM4-205ENST00000550376 TRIM35Q9UPQ4 493 aa27.31■■□□□ 1.96
PRDM4-205ENST00000550376 RIPK4P57078 832 aa27.3■■□□□ 1.96
PRDM4-205ENST00000550376 WDR63Q8IWG1 891 aa27.3■■□□□ 1.96
PRDM4-205ENST00000550376 MAP2P11137 1827 aaKnown RBP27.3■■□□□ 1.96
PRDM4-205ENST00000550376 NGDNQ8NEJ9 315 aaKnown RBP27.29■■□□□ 1.96
PRDM4-205ENST00000550376 PHACTR3Q96KR7 559 aa27.29■■□□□ 1.96
PRDM4-205ENST00000550376 SKAP1Q86WV1 359 aa27.28■■□□□ 1.96
PRDM4-205ENST00000550376 CCDC27Q2M243 656 aa27.28■■□□□ 1.96
PRDM4-205ENST00000550376 IL13P35225 146 aa27.26■■□□□ 1.95
PRDM4-205ENST00000550376 FRAT1Q92837 279 aaPredicted RBP27.26■■□□□ 1.95
PRDM4-205ENST00000550376 RSPH6AQ9H0K4 717 aa27.26■■□□□ 1.95
PRDM4-205ENST00000550376 MYT1Q01538 1121 aa27.25■■□□□ 1.95
PRDM4-205ENST00000550376 NUTM2GQ5VZR2 741 aa27.25■■□□□ 1.95
PRDM4-205ENST00000550376 PTCH1Q13635 1447 aa27.24■■□□□ 1.95
PRDM4-205ENST00000550376 FCHSD2O94868 740 aa27.23■■□□□ 1.95
PRDM4-205ENST00000550376 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.23■■□□□ 1.95
PRDM4-205ENST00000550376 USP6P35125 1406 aa27.23■■□□□ 1.95
PRDM4-205ENST00000550376 ADGRB2O60241 1585 aa27.23■■□□□ 1.95
PRDM4-205ENST00000550376 MON2Q7Z3U7 1717 aa27.23■■□□□ 1.95
PRDM4-205ENST00000550376 THUMPD2Q9BTF0 503 aaKnown RBP27.22■■□□□ 1.95
PRDM4-205ENST00000550376 TNNQ9UQP3 1299 aa27.21■■□□□ 1.95
PRDM4-205ENST00000550376 ITSN1Q15811 1721 aa27.21■■□□□ 1.95
PRDM4-205ENST00000550376 AKAP12Q02952 1782 aa27.21■■□□□ 1.95
PRDM4-205ENST00000550376 RARSP54136 660 aaKnown RBP27.2■■□□□ 1.95
PRDM4-205ENST00000550376 CANXP27824 592 aaKnown RBP27.2■■□□□ 1.94
PRDM4-205ENST00000550376 PANK1Q8TE04 598 aa27.2■■□□□ 1.94
PRDM4-205ENST00000550376 RGPD8O14715 1765 aaPredicted RBP27.19■■□□□ 1.94
PRDM4-205ENST00000550376 DIP2AQ14689 1571 aa27.19■■□□□ 1.94
PRDM4-205ENST00000550376 ADAMTSL3P82987 1691 aa27.19■■□□□ 1.94
PRDM4-205ENST00000550376 HSP90AB2PQ58FF8 381 aa27.19■■□□□ 1.94
PRDM4-205ENST00000550376 MYH16Q9H6N6 1097 aa27.19■■□□□ 1.94
PRDM4-205ENST00000550376 AATKQ6ZMQ8 1374 aa27.19■■□□□ 1.94
PRDM4-205ENST00000550376 LAS1LQ9Y4W2 734 aaKnown RBP27.18■■□□□ 1.94
PRDM4-205ENST00000550376 FANCIQ9NVI1 1328 aa27.18■■□□□ 1.94
PRDM4-205ENST00000550376 EXOSC9Q06265 439 aaKnown RBP27.17■■□□□ 1.94
PRDM4-205ENST00000550376 AEBP1Q8IUX7 1158 aa27.17■■□□□ 1.94
PRDM4-205ENST00000550376 LRRC7Q96NW7 1537 aa27.17■■□□□ 1.94
PRDM4-205ENST00000550376 PAK3O75914 559 aaPredicted RBP27.15■■□□□ 1.94
PRDM4-205ENST00000550376 EIF4A2Q14240 407 aaKnown RBP27.15■■□□□ 1.94
PRDM4-205ENST00000550376 COG6Q9Y2V7 657 aa27.15■■□□□ 1.94
PRDM4-205ENST00000550376 TOPAZ1Q8N9V7 1692 aa27.15■■□□□ 1.94
PRDM4-205ENST00000550376 PNNQ9H307 717 aaKnown RBP27.14■■□□□ 1.94
PRDM4-205ENST00000550376 XRN1Q8IZH2 1706 aaKnown RBP27.14■■□□□ 1.94
PRDM4-205ENST00000550376 NEFMP07197 916 aa27.14■■□□□ 1.94
PRDM4-205ENST00000550376 CLUAP1Q96AJ1 413 aa27.14■■□□□ 1.94
PRDM4-205ENST00000550376 CDK12Q9NYV4 1490 aaPredicted RBP27.12■■□□□ 1.93
PRDM4-205ENST00000550376 SSH2Q76I76 1423 aa27.12■■□□□ 1.93
PRDM4-205ENST00000550376 PLEKHG5O94827 1062 aa27.12■■□□□ 1.93
PRDM4-205ENST00000550376 C14orf37Q86TY3 774 aa27.12■■□□□ 1.93
PRDM4-205ENST00000550376 OVOS2A0A0J9YW53 1432 aa27.12■■□□□ 1.93
PRDM4-205ENST00000550376 OVOS2Q6IE36 1432 aa27.12■■□□□ 1.93
PRDM4-205ENST00000550376 NLRP6P59044 892 aa27.11■■□□□ 1.93
PRDM4-205ENST00000550376 SULT6B1Q6IMI4 303 aa27.11■■□□□ 1.93
PRDM4-205ENST00000550376 FAM83GA6ND36 823 aa27.11■■□□□ 1.93
PRDM4-205ENST00000550376 RLBP1P12271 317 aa27.1■■□□□ 1.93
PRDM4-205ENST00000550376 NFE2L2Q16236 605 aa27.1■■□□□ 1.93
PRDM4-205ENST00000550376 PIK3R4Q99570 1358 aa27.1■■□□□ 1.93
PRDM4-205ENST00000550376 SETD1BQ9UPS6 1966 aaKnown RBP27.1■■□□□ 1.93
PRDM4-205ENST00000550376 DCTN1Q14203 1278 aa27.09■■□□□ 1.93
PRDM4-205ENST00000550376 MAP3K19Q56UN5 1328 aa27.09■■□□□ 1.93
PRDM4-205ENST00000550376 NCBP3Q53F19 620 aaKnown RBP27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms