RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 USP6P35125 1406 aa31.42■■■□□ 2.62
BRF1-216ENST00000550208 ADAMTS2O95450 1211 aa31.42■■■□□ 2.62
BRF1-216ENST00000550208 NUTM2GQ5VZR2 741 aa31.42■■■□□ 2.62
BRF1-216ENST00000550208 CD163L1Q9NR16 1453 aa31.4■■■□□ 2.62
BRF1-216ENST00000550208 C11orf95C9JLR9 678 aaPredicted RBP31.4■■■□□ 2.62
BRF1-216ENST00000550208 HDGFL2Q7Z4V5 671 aaPredicted RBP31.4■■■□□ 2.62
BRF1-216ENST00000550208 ABTB2Q8N961 1025 aa31.4■■■□□ 2.62
BRF1-216ENST00000550208 ALS2Q96Q42 1657 aa31.4■■■□□ 2.62
BRF1-216ENST00000550208 KTN1Q86UP2 1357 aaKnown RBP31.4■■■□□ 2.62
BRF1-216ENST00000550208 POLR3GLQ9BT43 218 aa31.39■■■□□ 2.62
BRF1-216ENST00000550208 TERF2IPQ9NYB0 399 aa31.39■■■□□ 2.62
BRF1-216ENST00000550208 BRD4O60885 1362 aaPredicted RBP31.39■■■□□ 2.62
BRF1-216ENST00000550208 SSH2Q76I76 1423 aa31.39■■■□□ 2.62
BRF1-216ENST00000550208 PHF23Q9BUL5 403 aaPredicted RBP31.38■■■□□ 2.61
BRF1-216ENST00000550208 AKAP12Q02952 1782 aa31.38■■■□□ 2.61
BRF1-216ENST00000550208 TTC21BQ7Z4L5 1316 aa31.37■■■□□ 2.61
BRF1-216ENST00000550208 NINLQ9Y2I6 1382 aa31.36■■■□□ 2.61
BRF1-216ENST00000550208 HAP1P54257 671 aaPredicted RBP31.35■■■□□ 2.61
BRF1-216ENST00000550208 C8orf37Q96NL8 207 aa31.34■■■□□ 2.61
BRF1-216ENST00000550208 RGS17Q9UGC6 210 aaPredicted RBP31.34■■■□□ 2.61
BRF1-216ENST00000550208 A0A1W2PP64 1363 aa31.33■■■□□ 2.61
BRF1-216ENST00000550208 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.32■■■□□ 2.6
BRF1-216ENST00000550208 NLRP6P59044 892 aa31.3■■■□□ 2.6
BRF1-216ENST00000550208 NLRP13Q86W25 1043 aa31.3■■■□□ 2.6
BRF1-216ENST00000550208 NGLY1Q96IV0 654 aa31.3■■■□□ 2.6
BRF1-216ENST00000550208 TTC21AQ8NDW8 1320 aa31.29■■■□□ 2.6
BRF1-216ENST00000550208 MON2Q7Z3U7 1717 aa31.28■■■□□ 2.6
BRF1-216ENST00000550208 ANKRD36BQ8N2N9 1353 aa31.28■■■□□ 2.6
BRF1-216ENST00000550208 ZEB1P37275 1124 aaPredicted RBP31.26■■■□□ 2.59
BRF1-216ENST00000550208 ZRANB1Q9UGI0 708 aa31.26■■■□□ 2.59
BRF1-216ENST00000550208 AFF2P51816 1311 aa31.25■■■□□ 2.59
BRF1-216ENST00000550208 NME9Q86XW9 330 aa31.25■■■□□ 2.59
BRF1-216ENST00000550208 EDC4Q6P2E9 1401 aaKnown RBP31.24■■■□□ 2.59
BRF1-216ENST00000550208 NRKQ7Z2Y5 1582 aa31.23■■■□□ 2.59
BRF1-216ENST00000550208 ABCA3Q99758 1704 aa31.23■■■□□ 2.59
BRF1-216ENST00000550208 USP19O94966 1318 aa31.23■■■□□ 2.59
BRF1-216ENST00000550208 KIF7Q2M1P5 1343 aa31.23■■■□□ 2.59
BRF1-216ENST00000550208 FAM83GA6ND36 823 aa31.22■■■□□ 2.59
BRF1-216ENST00000550208 CARD14Q9BXL6 1004 aa31.22■■■□□ 2.59
BRF1-216ENST00000550208 PIK3C2AO00443 1686 aa31.21■■■□□ 2.59
BRF1-216ENST00000550208 MYOM1P52179 1685 aa31.21■■■□□ 2.59
BRF1-216ENST00000550208 CRYBG1Q9Y4K1 1723 aa31.21■■■□□ 2.59
BRF1-216ENST00000550208 GCP02774 474 aa31.2■■■□□ 2.59
BRF1-216ENST00000550208 ZC3H6P61129 1189 aaKnown RBP31.2■■■□□ 2.59
BRF1-216ENST00000550208 POTEAQ6S8J7 498 aa31.2■■■□□ 2.59
BRF1-216ENST00000550208 FNBP4Q8N3X1 1017 aaPredicted RBP31.2■■■□□ 2.59
BRF1-216ENST00000550208 MARF1Q9Y4F3 1742 aaKnown RBP31.2■■■□□ 2.58
BRF1-216ENST00000550208 ZNF772Q68DY9 489 aaPredicted RBP31.19■■■□□ 2.58
BRF1-216ENST00000550208 USP21Q9UK80 565 aa31.17■■■□□ 2.58
BRF1-216ENST00000550208 USP31Q70CQ4 1352 aa31.17■■■□□ 2.58
BRF1-216ENST00000550208 PANK3Q9H999 370 aa31.16■■■□□ 2.58
BRF1-216ENST00000550208 PHRF1Q9P1Y6 1649 aaKnown RBP31.15■■■□□ 2.58
BRF1-216ENST00000550208 PRDM11Q9NQV5 511 aa31.14■■■□□ 2.58
BRF1-216ENST00000550208 KIAA0232Q92628 1395 aa31.14■■■□□ 2.58
BRF1-216ENST00000550208 CHRNA2Q15822 529 aa31.13■■■□□ 2.57
BRF1-216ENST00000550208 FYB1O15117 783 aa31.12■■■□□ 2.57
BRF1-216ENST00000550208 SOX12O15370 315 aa31.12■■■□□ 2.57
BRF1-216ENST00000550208 QTRT2Q9H974 415 aaKnown RBP31.12■■■□□ 2.57
BRF1-216ENST00000550208 WASHC2AQ641Q2 1341 aa31.12■■■□□ 2.57
BRF1-216ENST00000550208 CCDC7Q96M83 1385 aa31.11■■■□□ 2.57
BRF1-216ENST00000550208 SLIT3O75094 1523 aa31.1■■■□□ 2.57
BRF1-216ENST00000550208 SLIT2O94813 1529 aa31.1■■■□□ 2.57
BRF1-216ENST00000550208 BCL9LQ86UU0 1499 aa31.1■■■□□ 2.57
BRF1-216ENST00000550208 KCNH5Q8NCM2 988 aa31.1■■■□□ 2.57
BRF1-216ENST00000550208 NSD3Q9BZ95 1437 aa31.09■■■□□ 2.57
BRF1-216ENST00000550208 ILDR2Q71H61 639 aa31.09■■■□□ 2.57
BRF1-216ENST00000550208 UNC5CLQ8IV45 518 aa31.09■■■□□ 2.57
BRF1-216ENST00000550208 ZBTB7CA1YPR0 619 aa31.08■■■□□ 2.57
BRF1-216ENST00000550208 GGNBP2Q9H3C7 697 aa31.08■■■□□ 2.57
BRF1-216ENST00000550208 BTG4Q9NY30 223 aa31.08■■■□□ 2.57
BRF1-216ENST00000550208 COG3Q96JB2 828 aa31.07■■■□□ 2.56
BRF1-216ENST00000550208 CPDO75976 1380 aa31.06■■■□□ 2.56
BRF1-216ENST00000550208 TRPC5Q9UL62 973 aaPredicted RBP31.05■■■□□ 2.56
BRF1-216ENST00000550208 ARHGEF25Q86VW2 580 aa31.04■■■□□ 2.56
BRF1-216ENST00000550208 OVOS2A0A0J9YW53 1432 aa31.04■■■□□ 2.56
BRF1-216ENST00000550208 OVOS2Q6IE36 1432 aa31.04■■■□□ 2.56
BRF1-216ENST00000550208 COL14A1Q05707 1796 aaKnown RBP31.04■■■□□ 2.56
BRF1-216ENST00000550208 USP54Q70EL1 1684 aa31.02■■■□□ 2.56
BRF1-216ENST00000550208 PLCH1Q4KWH8 1693 aa31.01■■■□□ 2.55
BRF1-216ENST00000550208 RXRBP28702 533 aa31.01■■■□□ 2.55
BRF1-216ENST00000550208 ATRNO75882 1429 aa31■■■□□ 2.55
BRF1-216ENST00000550208 FBLN1P23142 703 aa31■■■□□ 2.55
BRF1-216ENST00000550208 CGNL1Q0VF96 1302 aa30.99■■■□□ 2.55
BRF1-216ENST00000550208 NFAT5O94916 1531 aa30.98■■■□□ 2.55
BRF1-216ENST00000550208 RBM6P78332 1123 aaKnown RBP30.98■■■□□ 2.55
BRF1-216ENST00000550208 NWD2Q9ULI1 1742 aa30.98■■■□□ 2.55
BRF1-216ENST00000550208 VPS72Q15906 364 aa30.97■■■□□ 2.55
BRF1-216ENST00000550208 AATKQ6ZMQ8 1374 aa30.96■■■□□ 2.55
BRF1-216ENST00000550208 GJD4Q96KN9 370 aaPredicted RBP30.96■■■□□ 2.55
BRF1-216ENST00000550208 STRN4Q9NRL3 753 aa30.96■■■□□ 2.55
BRF1-216ENST00000550208 AXIN2Q9Y2T1 843 aa30.96■■■□□ 2.55
BRF1-216ENST00000550208 CAMTA1Q9Y6Y1 1673 aa30.96■■■□□ 2.55
BRF1-216ENST00000550208 EVA1CP58658 441 aa30.95■■■□□ 2.55
BRF1-216ENST00000550208 CCDC9Q9Y3X0 531 aaKnown RBP30.95■■■□□ 2.55
BRF1-216ENST00000550208 KNSTRNQ9Y448 316 aa30.95■■■□□ 2.55
BRF1-216ENST00000550208 KIF20BQ96Q89 1820 aa30.95■■■□□ 2.55
BRF1-216ENST00000550208 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.94■■■□□ 2.54
BRF1-216ENST00000550208 PER1O15534 1290 aaPredicted RBP30.93■■■□□ 2.54
BRF1-216ENST00000550208 NRAPQ86VF7 1730 aa30.92■■■□□ 2.54
BRF1-216ENST00000550208 LMO7Q8WWI1 1683 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms