RNA–Protein interactions for RNA: ENST00000549971.5

CACNB3-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-212ENST00000549971 MTHFSP49914 203 aa16.71■□□□□ 0.27
CACNB3-212ENST00000549971 PROSER2Q86WR7 435 aaPredicted RBP16.71■□□□□ 0.27
CACNB3-212ENST00000549971 NGDNQ8NEJ9 315 aaKnown RBP16.71■□□□□ 0.27
CACNB3-212ENST00000549971 FBXO41Q8TF61 875 aa16.71■□□□□ 0.27
CACNB3-212ENST00000549971 NUDCQ9Y266 331 aa16.71■□□□□ 0.27
CACNB3-212ENST00000549971 C14orf37Q86TY3 774 aa16.7■□□□□ 0.26
CACNB3-212ENST00000549971 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.7■□□□□ 0.26
CACNB3-212ENST00000549971 C19orf44Q9H6X5 657 aa16.7■□□□□ 0.26
CACNB3-212ENST00000549971 DMRT2Q9Y5R5 561 aa16.7■□□□□ 0.26
CACNB3-212ENST00000549971 USP31Q70CQ4 1352 aa16.69■□□□□ 0.26
CACNB3-212ENST00000549971 PNPLA6Q8IY17 1366 aa16.69■□□□□ 0.26
CACNB3-212ENST00000549971 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
CACNB3-212ENST00000549971 ADAMTS8Q9UP79 889 aa16.69■□□□□ 0.26
CACNB3-212ENST00000549971 PNNQ9H307 717 aaKnown RBP16.68■□□□□ 0.26
CACNB3-212ENST00000549971 PHF8Q9UPP1 1060 aa16.68■□□□□ 0.26
CACNB3-212ENST00000549971 OVOS2A0A0J9YW53 1432 aa16.68■□□□□ 0.26
CACNB3-212ENST00000549971 OVOS2Q6IE36 1432 aa16.68■□□□□ 0.26
CACNB3-212ENST00000549971 CDK12Q9NYV4 1490 aaPredicted RBP16.67■□□□□ 0.26
CACNB3-212ENST00000549971 TNNT2P45379 298 aaPredicted RBP16.67■□□□□ 0.26
CACNB3-212ENST00000549971 KIF1AQ12756 1690 aa16.66■□□□□ 0.26
CACNB3-212ENST00000549971 HSPA2P54652 639 aa16.66■□□□□ 0.26
CACNB3-212ENST00000549971 NME9Q86XW9 330 aa16.66■□□□□ 0.26
CACNB3-212ENST00000549971 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
CACNB3-212ENST00000549971 USP54Q70EL1 1684 aa16.65■□□□□ 0.26
CACNB3-212ENST00000549971 COL3A1P02461 1466 aaPredicted RBP16.65■□□□□ 0.26
CACNB3-212ENST00000549971 STRCQ7RTU9 1775 aa16.64■□□□□ 0.25
CACNB3-212ENST00000549971 NUTM2FA1L443 756 aa16.64■□□□□ 0.25
CACNB3-212ENST00000549971 TMEM94Q12767 1356 aa16.64■□□□□ 0.25
CACNB3-212ENST00000549971 KIF24Q5T7B8 1368 aa16.64■□□□□ 0.25
CACNB3-212ENST00000549971 CADPS2Q86UW7 1296 aa16.63■□□□□ 0.25
CACNB3-212ENST00000549971 PMFBP1Q8TBY8 1022 aa16.63■□□□□ 0.25
CACNB3-212ENST00000549971 MSH6P52701 1360 aa16.63■□□□□ 0.25
CACNB3-212ENST00000549971 DIAPH1O60610 1272 aaKnown RBP16.62■□□□□ 0.25
CACNB3-212ENST00000549971 ATF3P18847 181 aa16.62■□□□□ 0.25
CACNB3-212ENST00000549971 RUNDC1Q96C34 613 aa16.62■□□□□ 0.25
CACNB3-212ENST00000549971 POLKQ9UBT6 870 aa16.62■□□□□ 0.25
CACNB3-212ENST00000549971 RGPD8O14715 1765 aaPredicted RBP16.61■□□□□ 0.25
CACNB3-212ENST00000549971 C1orf167Q5SNV9 1468 aa16.61■□□□□ 0.25
CACNB3-212ENST00000549971 NEFLP07196 543 aa16.6■□□□□ 0.25
CACNB3-212ENST00000549971 GTF3C3Q9Y5Q9 886 aa16.6■□□□□ 0.25
CACNB3-212ENST00000549971 ESCO1Q5FWF5 840 aa16.59■□□□□ 0.25
CACNB3-212ENST00000549971 U2AF1L5P0DN76 240 aaPredicted RBP16.58■□□□□ 0.24
CACNB3-212ENST00000549971 U2AF1Q01081 240 aaKnown RBP eCLIP16.58■□□□□ 0.24
CACNB3-212ENST00000549971 MST1RQ04912 1400 aa16.58■□□□□ 0.24
CACNB3-212ENST00000549971 STRCP1A6NGW2 1772 aa16.57■□□□□ 0.24
CACNB3-212ENST00000549971 PIK3C2AO00443 1686 aa16.57■□□□□ 0.24
CACNB3-212ENST00000549971 NEFMP07197 916 aa16.57■□□□□ 0.24
CACNB3-212ENST00000549971 PSME1Q06323 249 aa16.57■□□□□ 0.24
CACNB3-212ENST00000549971 IQSEC2Q5JU85 1478 aa16.56■□□□□ 0.24
CACNB3-212ENST00000549971 FCHSD2O94868 740 aa16.56■□□□□ 0.24
CACNB3-212ENST00000549971 CCDC27Q2M243 656 aa16.56■□□□□ 0.24
CACNB3-212ENST00000549971 SBNO1A3KN83 1393 aa16.55■□□□□ 0.24
CACNB3-212ENST00000549971 RTL1A6NKG5 1358 aa16.55■□□□□ 0.24
CACNB3-212ENST00000549971 ZNF521Q96K83 1311 aa16.55■□□□□ 0.24
CACNB3-212ENST00000549971 KCNH5Q8NCM2 988 aa16.55■□□□□ 0.24
CACNB3-212ENST00000549971 FLT4P35916 1363 aa16.54■□□□□ 0.24
CACNB3-212ENST00000549971 MAPK8IP3Q9UPT6 1336 aa16.54■□□□□ 0.24
CACNB3-212ENST00000549971 NLRP6P59044 892 aa16.54■□□□□ 0.24
CACNB3-212ENST00000549971 ABTB2Q8N961 1025 aa16.54■□□□□ 0.24
CACNB3-212ENST00000549971 MAP2P11137 1827 aaKnown RBP16.54■□□□□ 0.24
CACNB3-212ENST00000549971 APAF1O14727 1248 aa16.53■□□□□ 0.24
CACNB3-212ENST00000549971 U2SURPO15042 1029 aaKnown RBP16.53■□□□□ 0.24
CACNB3-212ENST00000549971 GOLGA2Q08379 1002 aa16.53■□□□□ 0.24
CACNB3-212ENST00000549971 RBM33Q96EV2 1170 aaKnown RBP16.53■□□□□ 0.24
CACNB3-212ENST00000549971 ZRANB1Q9UGI0 708 aa16.53■□□□□ 0.24
CACNB3-212ENST00000549971 NPHP3Q7Z494 1330 aa16.52■□□□□ 0.24
CACNB3-212ENST00000549971 ERICH6BQ5W0A0 696 aa16.52■□□□□ 0.24
CACNB3-212ENST00000549971 EMILIN1Q9Y6C2 1016 aa16.52■□□□□ 0.24
CACNB3-212ENST00000549971 PPM1GO15355 546 aaPredicted RBP16.51■□□□□ 0.23
CACNB3-212ENST00000549971 PAK3O75914 559 aaPredicted RBP16.51■□□□□ 0.23
CACNB3-212ENST00000549971 IL13P35225 146 aa16.51■□□□□ 0.23
CACNB3-212ENST00000549971 CCDC146Q8IYE0 955 aa16.51■□□□□ 0.23
CACNB3-212ENST00000549971 E9PSI1 815 aa16.5■□□□□ 0.23
CACNB3-212ENST00000549971 WDR63Q8IWG1 891 aa16.5■□□□□ 0.23
CACNB3-212ENST00000549971 TCP11L2Q8N4U5 519 aa16.5■□□□□ 0.23
CACNB3-212ENST00000549971 ORAI2Q96SN7 254 aa16.5■□□□□ 0.23
CACNB3-212ENST00000549971 RRS1Q15050 365 aaKnown RBP16.49■□□□□ 0.23
CACNB3-212ENST00000549971 PLEKHF1Q96S99 279 aa16.49■□□□□ 0.23
CACNB3-212ENST00000549971 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
CACNB3-212ENST00000549971 SLIT3O75094 1523 aa16.49■□□□□ 0.23
CACNB3-212ENST00000549971 MAP3K19Q56UN5 1328 aa16.48■□□□□ 0.23
CACNB3-212ENST00000549971 ZNF335Q9H4Z2 1342 aaPredicted RBP16.48■□□□□ 0.23
CACNB3-212ENST00000549971 TRPM3Q9HCF6 1732 aaPredicted RBP16.48■□□□□ 0.23
CACNB3-212ENST00000549971 KRT28Q7Z3Y7 464 aa16.48■□□□□ 0.23
CACNB3-212ENST00000549971 ARHGEF10O15013 1369 aa16.48■□□□□ 0.23
CACNB3-212ENST00000549971 PHRF1Q9P1Y6 1649 aaKnown RBP16.48■□□□□ 0.23
CACNB3-212ENST00000549971 FOXO3O43524 673 aa16.47■□□□□ 0.23
CACNB3-212ENST00000549971 MARF1Q9Y4F3 1742 aaKnown RBP16.47■□□□□ 0.23
CACNB3-212ENST00000549971 USP19O94966 1318 aa16.46■□□□□ 0.23
CACNB3-212ENST00000549971 AMPHP49418 695 aa16.46■□□□□ 0.23
CACNB3-212ENST00000549971 WWC1Q8IX03 1113 aa16.46■□□□□ 0.23
CACNB3-212ENST00000549971 RSPH6AQ9H0K4 717 aa16.46■□□□□ 0.23
CACNB3-212ENST00000549971 SALL2Q9Y467 1007 aaPredicted RBP16.46■□□□□ 0.23
CACNB3-212ENST00000549971 SUPT16HQ9Y5B9 1047 aaKnown RBP16.46■□□□□ 0.23
CACNB3-212ENST00000549971 XIRP1Q702N8 1843 aaKnown RBP16.46■□□□□ 0.23
CACNB3-212ENST00000549971 NFAT5O94916 1531 aa16.45■□□□□ 0.22
CACNB3-212ENST00000549971 CALD1Q05682 793 aaKnown RBP16.45■□□□□ 0.22
CACNB3-212ENST00000549971 SLFN5Q08AF3 891 aa16.45■□□□□ 0.22
CACNB3-212ENST00000549971 LMOD3Q0VAK6 560 aa16.45■□□□□ 0.22
CACNB3-212ENST00000549971 IL16Q14005 1332 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms