RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 SLC12A5Q9H2X9 1139 aa20.81■□□□□ 0.92
GPN3-206ENST00000549963 COL22A1Q8NFW1 1626 aaPredicted RBP20.81■□□□□ 0.92
GPN3-206ENST00000549963 TRPM3Q9HCF6 1732 aaPredicted RBP20.8■□□□□ 0.92
GPN3-206ENST00000549963 PLEKHG5O94827 1062 aa20.79■□□□□ 0.92
GPN3-206ENST00000549963 ADAMTS2O95450 1211 aa20.79■□□□□ 0.92
GPN3-206ENST00000549963 KTN1Q86UP2 1357 aaKnown RBP20.79■□□□□ 0.92
GPN3-206ENST00000549963 ZEB1P37275 1124 aaPredicted RBP20.78■□□□□ 0.92
GPN3-206ENST00000549963 USP6P35125 1406 aa20.78■□□□□ 0.92
GPN3-206ENST00000549963 NLRP13Q86W25 1043 aa20.77■□□□□ 0.92
GPN3-206ENST00000549963 POLR3GLQ9BT43 218 aa20.77■□□□□ 0.92
GPN3-206ENST00000549963 AKAP12Q02952 1782 aa20.77■□□□□ 0.91
GPN3-206ENST00000549963 NGLY1Q96IV0 654 aa20.76■□□□□ 0.91
GPN3-206ENST00000549963 CPSF1Q10570 1443 aaKnown RBP20.76■□□□□ 0.91
GPN3-206ENST00000549963 ALS2Q96Q42 1657 aa20.76■□□□□ 0.91
GPN3-206ENST00000549963 CABLES1Q8TDN4 633 aa20.75■□□□□ 0.91
GPN3-206ENST00000549963 C8orf37Q96NL8 207 aa20.75■□□□□ 0.91
GPN3-206ENST00000549963 TTC21AQ8NDW8 1320 aa20.75■□□□□ 0.91
GPN3-206ENST00000549963 LRP6O75581 1613 aa20.75■□□□□ 0.91
GPN3-206ENST00000549963 NUTM2GQ5VZR2 741 aa20.74■□□□□ 0.91
GPN3-206ENST00000549963 TTC21BQ7Z4L5 1316 aa20.74■□□□□ 0.91
GPN3-206ENST00000549963 NLRP6P59044 892 aa20.73■□□□□ 0.91
GPN3-206ENST00000549963 ZNF772Q68DY9 489 aaPredicted RBP20.73■□□□□ 0.91
GPN3-206ENST00000549963 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.71■□□□□ 0.91
GPN3-206ENST00000549963 MON2Q7Z3U7 1717 aa20.7■□□□□ 0.9
GPN3-206ENST00000549963 MARF1Q9Y4F3 1742 aaKnown RBP20.7■□□□□ 0.9
GPN3-206ENST00000549963 A0A1W2PP64 1363 aa20.69■□□□□ 0.9
GPN3-206ENST00000549963 ANKRD36BQ8N2N9 1353 aa20.69■□□□□ 0.9
GPN3-206ENST00000549963 EDC4Q6P2E9 1401 aaKnown RBP20.69■□□□□ 0.9
GPN3-206ENST00000549963 SSH2Q76I76 1423 aa20.69■□□□□ 0.9
GPN3-206ENST00000549963 AFF2P51816 1311 aa20.68■□□□□ 0.9
GPN3-206ENST00000549963 CD163L1Q9NR16 1453 aa20.68■□□□□ 0.9
GPN3-206ENST00000549963 USP21Q9UK80 565 aa20.66■□□□□ 0.9
GPN3-206ENST00000549963 FNBP4Q8N3X1 1017 aaPredicted RBP20.65■□□□□ 0.9
GPN3-206ENST00000549963 KCNH5Q8NCM2 988 aa20.65■□□□□ 0.9
GPN3-206ENST00000549963 ABCA3Q99758 1704 aa20.64■□□□□ 0.9
GPN3-206ENST00000549963 GCP02774 474 aa20.64■□□□□ 0.89
GPN3-206ENST00000549963 PRDM11Q9NQV5 511 aa20.64■□□□□ 0.89
GPN3-206ENST00000549963 USP19O94966 1318 aa20.63■□□□□ 0.89
GPN3-206ENST00000549963 ZC3H6P61129 1189 aaKnown RBP20.63■□□□□ 0.89
GPN3-206ENST00000549963 RGS17Q9UGC6 210 aaPredicted RBP20.63■□□□□ 0.89
GPN3-206ENST00000549963 FAM83GA6ND36 823 aa20.62■□□□□ 0.89
GPN3-206ENST00000549963 C11orf95C9JLR9 678 aaPredicted RBP20.62■□□□□ 0.89
GPN3-206ENST00000549963 NME9Q86XW9 330 aa20.62■□□□□ 0.89
GPN3-206ENST00000549963 QTRT2Q9H974 415 aaKnown RBP20.62■□□□□ 0.89
GPN3-206ENST00000549963 NRKQ7Z2Y5 1582 aa20.62■□□□□ 0.89
GPN3-206ENST00000549963 PIK3C2AO00443 1686 aa20.61■□□□□ 0.89
GPN3-206ENST00000549963 COG3Q96JB2 828 aa20.61■□□□□ 0.89
GPN3-206ENST00000549963 CRYBG1Q9Y4K1 1723 aa20.61■□□□□ 0.89
GPN3-206ENST00000549963 PHRF1Q9P1Y6 1649 aaKnown RBP20.6■□□□□ 0.89
GPN3-206ENST00000549963 TRPC5Q9UL62 973 aaPredicted RBP20.6■□□□□ 0.89
GPN3-206ENST00000549963 MYOM1P52179 1685 aa20.6■□□□□ 0.89
GPN3-206ENST00000549963 USP31Q70CQ4 1352 aa20.59■□□□□ 0.89
GPN3-206ENST00000549963 UNC5CLQ8IV45 518 aa20.59■□□□□ 0.89
GPN3-206ENST00000549963 KIAA0232Q92628 1395 aa20.59■□□□□ 0.89
GPN3-206ENST00000549963 KIF7Q2M1P5 1343 aa20.58■□□□□ 0.89
GPN3-206ENST00000549963 RXRBP28702 533 aa20.58■□□□□ 0.89
GPN3-206ENST00000549963 POTEAQ6S8J7 498 aa20.58■□□□□ 0.89
GPN3-206ENST00000549963 PANK3Q9H999 370 aa20.58■□□□□ 0.89
GPN3-206ENST00000549963 COL14A1Q05707 1796 aaKnown RBP20.58■□□□□ 0.89
GPN3-206ENST00000549963 ZBTB7CA1YPR0 619 aa20.57■□□□□ 0.88
GPN3-206ENST00000549963 BTG4Q9NY30 223 aa20.57■□□□□ 0.88
GPN3-206ENST00000549963 CGNL1Q0VF96 1302 aa20.56■□□□□ 0.88
GPN3-206ENST00000549963 SOX12O15370 315 aa20.56■□□□□ 0.88
GPN3-206ENST00000549963 EVA1CP58658 441 aa20.56■□□□□ 0.88
GPN3-206ENST00000549963 CARD14Q9BXL6 1004 aa20.56■□□□□ 0.88
GPN3-206ENST00000549963 ZRANB1Q9UGI0 708 aa20.56■□□□□ 0.88
GPN3-206ENST00000549963 CPDO75976 1380 aa20.56■□□□□ 0.88
GPN3-206ENST00000549963 NWD2Q9ULI1 1742 aa20.56■□□□□ 0.88
GPN3-206ENST00000549963 SLIT2O94813 1529 aa20.55■□□□□ 0.88
GPN3-206ENST00000549963 FYB1O15117 783 aa20.55■□□□□ 0.88
GPN3-206ENST00000549963 RBM6P78332 1123 aaKnown RBP20.55■□□□□ 0.88
GPN3-206ENST00000549963 CHRNA2Q15822 529 aa20.55■□□□□ 0.88
GPN3-206ENST00000549963 CCDC9Q9Y3X0 531 aaKnown RBP20.55■□□□□ 0.88
GPN3-206ENST00000549963 NSD3Q9BZ95 1437 aa20.54■□□□□ 0.88
GPN3-206ENST00000549963 SLIT3O75094 1523 aa20.54■□□□□ 0.88
GPN3-206ENST00000549963 GGNBP2Q9H3C7 697 aa20.53■□□□□ 0.88
GPN3-206ENST00000549963 KNSTRNQ9Y448 316 aa20.53■□□□□ 0.88
GPN3-206ENST00000549963 CCDC7Q96M83 1385 aa20.53■□□□□ 0.88
GPN3-206ENST00000549963 BCL9LQ86UU0 1499 aa20.53■□□□□ 0.88
GPN3-206ENST00000549963 PLCH1Q4KWH8 1693 aa20.53■□□□□ 0.88
GPN3-206ENST00000549963 USP54Q70EL1 1684 aa20.52■□□□□ 0.88
GPN3-206ENST00000549963 KIF20BQ96Q89 1820 aa20.51■□□□□ 0.87
GPN3-206ENST00000549963 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.51■□□□□ 0.87
GPN3-206ENST00000549963 VPS72Q15906 364 aa20.51■□□□□ 0.87
GPN3-206ENST00000549963 ARHGEF25Q86VW2 580 aa20.51■□□□□ 0.87
GPN3-206ENST00000549963 WASHC2AQ641Q2 1341 aa20.51■□□□□ 0.87
GPN3-206ENST00000549963 AATKQ6ZMQ8 1374 aa20.5■□□□□ 0.87
GPN3-206ENST00000549963 GJD4Q96KN9 370 aaPredicted RBP20.5■□□□□ 0.87
GPN3-206ENST00000549963 STRN4Q9NRL3 753 aa20.5■□□□□ 0.87
GPN3-206ENST00000549963 OVOS2A0A0J9YW53 1432 aa20.49■□□□□ 0.87
GPN3-206ENST00000549963 ATRNO75882 1429 aa20.49■□□□□ 0.87
GPN3-206ENST00000549963 OVOS2Q6IE36 1432 aa20.49■□□□□ 0.87
GPN3-206ENST00000549963 ILDR2Q71H61 639 aa20.48■□□□□ 0.87
GPN3-206ENST00000549963 NFAT5O94916 1531 aa20.45■□□□□ 0.86
GPN3-206ENST00000549963 AMPHP49418 695 aa20.44■□□□□ 0.86
GPN3-206ENST00000549963 NSD2O96028 1365 aa20.44■□□□□ 0.86
GPN3-206ENST00000549963 LTN1O94822 1766 aa20.44■□□□□ 0.86
GPN3-206ENST00000549963 CAMTA1Q9Y6Y1 1673 aa20.43■□□□□ 0.86
GPN3-206ENST00000549963 CSB-PGBD3P0DP91 1061 aa20.43■□□□□ 0.86
GPN3-206ENST00000549963 NRAPQ86VF7 1730 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms