RNA–Protein interactions for RNA: ENST00000549857.1

C17orf49-206, Transcript of chromosome 17 open reading frame 49, humanhuman

TSL 2

Gene C17orf49, Length 2,343 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C17orf49-206ENST00000549857 TBC1D2Q9BYX2 928 aa23.34■■□□□ 1.33
C17orf49-206ENST00000549857 U2AF1L5P0DN76 240 aaPredicted RBP23.33■■□□□ 1.33
C17orf49-206ENST00000549857 U2AF1Q01081 240 aaKnown RBP eCLIP23.33■■□□□ 1.33
C17orf49-206ENST00000549857 USP32Q8NFA0 1604 aa23.33■■□□□ 1.33
C17orf49-206ENST00000549857 ADGRB1O14514 1584 aa23.33■■□□□ 1.33
C17orf49-206ENST00000549857 MVPQ14764 893 aaKnown RBP23.33■■□□□ 1.33
C17orf49-206ENST00000549857 TMEM131LA2VDJ0 1609 aa23.33■■□□□ 1.32
C17orf49-206ENST00000549857 MYO5BQ9ULV0 1848 aa23.32■■□□□ 1.32
C17orf49-206ENST00000549857 ZKSCAN2Q63HK3 967 aa23.3■■□□□ 1.32
C17orf49-206ENST00000549857 FTSJ3Q8IY81 847 aaKnown RBP23.3■■□□□ 1.32
C17orf49-206ENST00000549857 TSR2Q969E8 191 aaKnown RBP23.29■■□□□ 1.32
C17orf49-206ENST00000549857 STAG3Q9UJ98 1225 aa23.28■■□□□ 1.32
C17orf49-206ENST00000549857 DZIP1LQ8IYY4 767 aaKnown RBP23.28■■□□□ 1.32
C17orf49-206ENST00000549857 SPRYD3Q8NCJ5 442 aa23.28■■□□□ 1.32
C17orf49-206ENST00000549857 A2ML1A8K2U0 1454 aa23.27■■□□□ 1.31
C17orf49-206ENST00000549857 UBR1Q8IWV7 1749 aa23.26■■□□□ 1.31
C17orf49-206ENST00000549857 FAM43AQ8N2R8 423 aa23.26■■□□□ 1.31
C17orf49-206ENST00000549857 NUTM2DQ5VT03 806 aaPredicted RBP23.25■■□□□ 1.31
C17orf49-206ENST00000549857 ADGRB2O60241 1585 aa23.25■■□□□ 1.31
C17orf49-206ENST00000549857 PRKCSHP14314 528 aaPredicted RBP23.25■■□□□ 1.31
C17orf49-206ENST00000549857 SMC4Q9NTJ3 1288 aa23.25■■□□□ 1.31
C17orf49-206ENST00000549857 EVC2Q86UK5 1308 aa23.24■■□□□ 1.31
C17orf49-206ENST00000549857 ANKRD36BQ8N2N9 1353 aa23.24■■□□□ 1.31
C17orf49-206ENST00000549857 EXOSC9Q06265 439 aaKnown RBP23.24■■□□□ 1.31
C17orf49-206ENST00000549857 NCBP3Q53F19 620 aaKnown RBP23.24■■□□□ 1.31
C17orf49-206ENST00000549857 CABP2Q9NPB3 220 aa23.24■■□□□ 1.31
C17orf49-206ENST00000549857 RPGRIP1LQ68CZ1 1315 aa23.23■■□□□ 1.31
C17orf49-206ENST00000549857 TULP4Q9NRJ4 1543 aa23.23■■□□□ 1.31
C17orf49-206ENST00000549857 NSD2O96028 1365 aa23.21■■□□□ 1.31
C17orf49-206ENST00000549857 TRIM27P14373 513 aa23.21■■□□□ 1.31
C17orf49-206ENST00000549857 MFAP1P55081 439 aaKnown RBP23.21■■□□□ 1.31
C17orf49-206ENST00000549857 C22orf23Q9BZE7 217 aa23.21■■□□□ 1.31
C17orf49-206ENST00000549857 CEP170BQ9Y4F5 1589 aaPredicted RBP23.21■■□□□ 1.31
C17orf49-206ENST00000549857 U2SURPO15042 1029 aaKnown RBP23.21■■□□□ 1.31
C17orf49-206ENST00000549857 NEXMIFQ5QGS0 1516 aa23.2■■□□□ 1.31
C17orf49-206ENST00000549857 SAFB2Q14151 953 aaKnown RBP eCLIP23.2■■□□□ 1.3
C17orf49-206ENST00000549857 ITPRIPQ8IWB1 547 aa23.2■■□□□ 1.3
C17orf49-206ENST00000549857 ARHGEF28Q8N1W1 1705 aaKnown RBP23.2■■□□□ 1.3
C17orf49-206ENST00000549857 ZNF142P52746 1687 aaPredicted RBP23.2■■□□□ 1.3
C17orf49-206ENST00000549857 SSH1Q8WYL5 1049 aa23.2■■□□□ 1.3
C17orf49-206ENST00000549857 CT47B1P0C2W7 299 aaPredicted RBP23.19■■□□□ 1.3
C17orf49-206ENST00000549857 L1TD1Q5T7N2 865 aaKnown RBP23.19■■□□□ 1.3
C17orf49-206ENST00000549857 TMPOP42166 694 aaKnown RBP23.18■■□□□ 1.3
C17orf49-206ENST00000549857 HDAC1Q13547 482 aaPredicted RBP23.18■■□□□ 1.3
C17orf49-206ENST00000549857 PUS7Q96PZ0 661 aaKnown RBP23.18■■□□□ 1.3
C17orf49-206ENST00000549857 PLEKHF1Q96S99 279 aa23.18■■□□□ 1.3
C17orf49-206ENST00000549857 TRIM35Q9UPQ4 493 aa23.18■■□□□ 1.3
C17orf49-206ENST00000549857 THEMISQ8N1K5 641 aaPredicted RBP23.17■■□□□ 1.3
C17orf49-206ENST00000549857 ARXQ96QS3 562 aa23.17■■□□□ 1.3
C17orf49-206ENST00000549857 ATF7IPQ6VMQ6 1270 aa23.16■■□□□ 1.3
C17orf49-206ENST00000549857 DDX19BQ9UMR2 479 aa23.16■■□□□ 1.3
C17orf49-206ENST00000549857 MCM4P33991 863 aa23.16■■□□□ 1.3
C17orf49-206ENST00000549857 GGNBP2Q9H3C7 697 aa23.16■■□□□ 1.3
C17orf49-206ENST00000549857 NOB1Q9ULX3 412 aaKnown RBP23.16■■□□□ 1.3
C17orf49-206ENST00000549857 TMEM2Q9UHN6 1383 aa23.16■■□□□ 1.3
C17orf49-206ENST00000549857 RIMS2Q9UQ26 1411 aa23.15■■□□□ 1.3
C17orf49-206ENST00000549857 ZFYVE9O95405 1425 aa23.14■■□□□ 1.3
C17orf49-206ENST00000549857 VGFO15240 615 aaPredicted RBP23.14■■□□□ 1.3
C17orf49-206ENST00000549857 SENP3Q9H4L4 574 aaPredicted RBP23.14■■□□□ 1.3
C17orf49-206ENST00000549857 A0A1W2PP64 1363 aa23.14■■□□□ 1.29
C17orf49-206ENST00000549857 EIF5BO60841 1220 aaKnown RBP23.14■■□□□ 1.29
C17orf49-206ENST00000549857 TMEM57Q8N5G2 664 aa23.13■■□□□ 1.29
C17orf49-206ENST00000549857 GZF1Q9H116 711 aaPredicted RBP23.13■■□□□ 1.29
C17orf49-206ENST00000549857 SMC5Q8IY18 1101 aa23.12■■□□□ 1.29
C17orf49-206ENST00000549857 CHMP5Q9NZZ3 219 aa23.12■■□□□ 1.29
C17orf49-206ENST00000549857 SLIT1O75093 1534 aa23.12■■□□□ 1.29
C17orf49-206ENST00000549857 ABCC11Q96J66 1382 aa23.12■■□□□ 1.29
C17orf49-206ENST00000549857 SRPK2P78362 688 aaKnown RBP23.11■■□□□ 1.29
C17orf49-206ENST00000549857 ARHGAP23Q9P227 1491 aa23.11■■□□□ 1.29
C17orf49-206ENST00000549857 COL3A1P02461 1466 aaPredicted RBP23.1■■□□□ 1.29
C17orf49-206ENST00000549857 HDGFP51858 240 aaKnown RBP23.1■■□□□ 1.29
C17orf49-206ENST00000549857 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.1■■□□□ 1.29
C17orf49-206ENST00000549857 STK26Q9P289 416 aa23.1■■□□□ 1.29
C17orf49-206ENST00000549857 RIPK4P57078 832 aa23.1■■□□□ 1.29
C17orf49-206ENST00000549857 RRAGDQ9NQL2 400 aaPredicted RBP23.1■■□□□ 1.29
C17orf49-206ENST00000549857 GOLGA6L3A6NEY3 463 aa23.09■■□□□ 1.29
C17orf49-206ENST00000549857 XRCC6P12956 609 aaKnown RBP eCLIP23.09■■□□□ 1.29
C17orf49-206ENST00000549857 ZBTB40Q9NUA8 1239 aa23.09■■□□□ 1.29
C17orf49-206ENST00000549857 RSPH6AQ9H0K4 717 aa23.08■■□□□ 1.28
C17orf49-206ENST00000549857 IL16Q14005 1332 aa23.07■■□□□ 1.28
C17orf49-206ENST00000549857 LTKP29376 864 aa23.07■■□□□ 1.28
C17orf49-206ENST00000549857 HSCBQ8IWL3 235 aa23.07■■□□□ 1.28
C17orf49-206ENST00000549857 FSD2A1L4K1 749 aa23.07■■□□□ 1.28
C17orf49-206ENST00000549857 FYB1O15117 783 aa23.06■■□□□ 1.28
C17orf49-206ENST00000549857 TRAK2O60296 914 aa23.06■■□□□ 1.28
C17orf49-206ENST00000549857 TXNDC2Q86VQ3 553 aa23.06■■□□□ 1.28
C17orf49-206ENST00000549857 EID1Q9Y6B2 187 aa23.05■■□□□ 1.28
C17orf49-206ENST00000549857 LNPKQ9C0E8 428 aa23.05■■□□□ 1.28
C17orf49-206ENST00000549857 IPO8O15397 1037 aaKnown RBP23.04■■□□□ 1.28
C17orf49-206ENST00000549857 NUCB1Q02818 461 aa23.04■■□□□ 1.28
C17orf49-206ENST00000549857 PANK2Q9BZ23 570 aa23.04■■□□□ 1.28
C17orf49-206ENST00000549857 KIF16BQ96L93 1317 aa23.03■■□□□ 1.28
C17orf49-206ENST00000549857 DIAPH1O60610 1272 aaKnown RBP23.03■■□□□ 1.28
C17orf49-206ENST00000549857 ZNF692Q9BU19 519 aaPredicted RBP23.03■■□□□ 1.28
C17orf49-206ENST00000549857 MINK1Q8N4C8 1332 aaPredicted RBP23.02■■□□□ 1.28
C17orf49-206ENST00000549857 ANKRD26Q9UPS8 1709 aa23.02■■□□□ 1.28
C17orf49-206ENST00000549857 LMTK3Q96Q04 1460 aa23.01■■□□□ 1.27
C17orf49-206ENST00000549857 TERF2IPQ9NYB0 399 aa23.01■■□□□ 1.27
C17orf49-206ENST00000549857 ANKLE2Q86XL3 938 aa23■■□□□ 1.27
C17orf49-206ENST00000549857 RBM25P49756 843 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms