RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 L3MBTL2Q969R5 705 aa14.97□□□□□ -0.01
CCDC38-207ENST00000549752 NEUROD1Q13562 356 aa14.96□□□□□ -0.01
CCDC38-207ENST00000549752 LMOD2Q6P5Q4 547 aa14.96□□□□□ -0.01
CCDC38-207ENST00000549752 NGDNQ8NEJ9 315 aaKnown RBP14.96□□□□□ -0.01
CCDC38-207ENST00000549752 PLCH1Q4KWH8 1693 aa14.96□□□□□ -0.01
CCDC38-207ENST00000549752 ATP7BP35670 1465 aa14.95□□□□□ -0.02
CCDC38-207ENST00000549752 PRR36Q9H6K5 1346 aa14.94□□□□□ -0.02
CCDC38-207ENST00000549752 CENPJQ9HC77 1338 aaPredicted RBP14.94□□□□□ -0.02
CCDC38-207ENST00000549752 NBPF1Q3BBV0 1214 aa14.94□□□□□ -0.02
CCDC38-207ENST00000549752 NUDT16Q96DE0 195 aaKnown RBP14.94□□□□□ -0.02
CCDC38-207ENST00000549752 SIN3AQ96ST3 1273 aa14.94□□□□□ -0.02
CCDC38-207ENST00000549752 CDK19Q9BWU1 502 aa14.94□□□□□ -0.02
CCDC38-207ENST00000549752 ATRNO75882 1429 aa14.93□□□□□ -0.02
CCDC38-207ENST00000549752 CCDC61Q9Y6R9 512 aa14.93□□□□□ -0.02
CCDC38-207ENST00000549752 CRYBG1Q9Y4K1 1723 aa14.92□□□□□ -0.02
CCDC38-207ENST00000549752 COL14A1Q05707 1796 aaKnown RBP14.92□□□□□ -0.02
CCDC38-207ENST00000549752 BCL9LQ86UU0 1499 aa14.91□□□□□ -0.02
CCDC38-207ENST00000549752 ROCK2O75116 1388 aaKnown RBP14.91□□□□□ -0.02
CCDC38-207ENST00000549752 SLIT2O94813 1529 aa14.91□□□□□ -0.02
CCDC38-207ENST00000549752 RGS12O14924 1447 aa14.91□□□□□ -0.02
CCDC38-207ENST00000549752 PAK3O75914 559 aaPredicted RBP14.9□□□□□ -0.02
CCDC38-207ENST00000549752 SRPK2P78362 688 aaKnown RBP14.9□□□□□ -0.02
CCDC38-207ENST00000549752 UNC5CLQ8IV45 518 aa14.9□□□□□ -0.02
CCDC38-207ENST00000549752 TONSLQ96HA7 1378 aa14.89□□□□□ -0.03
CCDC38-207ENST00000549752 PHRF1Q9P1Y6 1649 aaKnown RBP14.88□□□□□ -0.03
CCDC38-207ENST00000549752 POLR3AO14802 1390 aaPredicted RBP14.88□□□□□ -0.03
CCDC38-207ENST00000549752 PLEKHG3A1L390 1219 aa14.88□□□□□ -0.03
CCDC38-207ENST00000549752 GJD4Q96KN9 370 aaPredicted RBP14.88□□□□□ -0.03
CCDC38-207ENST00000549752 BRD4O60885 1362 aaPredicted RBP14.87□□□□□ -0.03
CCDC38-207ENST00000549752 CABLES1Q8TDN4 633 aa14.87□□□□□ -0.03
CCDC38-207ENST00000549752 ZNF219Q9P2Y4 722 aaPredicted RBP14.87□□□□□ -0.03
CCDC38-207ENST00000549752 ACEP12821 1306 aa14.87□□□□□ -0.03
CCDC38-207ENST00000549752 EVC2Q86UK5 1308 aa14.87□□□□□ -0.03
CCDC38-207ENST00000549752 BRWD3Q6RI45 1802 aa14.87□□□□□ -0.03
CCDC38-207ENST00000549752 ATAD2Q6PL18 1390 aa14.86□□□□□ -0.03
CCDC38-207ENST00000549752 NRAPQ86VF7 1730 aa14.86□□□□□ -0.03
CCDC38-207ENST00000549752 PLEKHG5O94827 1062 aa14.86□□□□□ -0.03
CCDC38-207ENST00000549752 UPF1Q92900 1129 aaKnown RBP eCLIP14.86□□□□□ -0.03
CCDC38-207ENST00000549752 PPIP5K1Q6PFW1 1433 aa14.85□□□□□ -0.03
CCDC38-207ENST00000549752 NBPF8Q3BBV2 869 aa14.85□□□□□ -0.03
CCDC38-207ENST00000549752 AKAP12Q02952 1782 aa14.85□□□□□ -0.03
CCDC38-207ENST00000549752 GLI3P10071 1580 aa14.85□□□□□ -0.03
CCDC38-207ENST00000549752 RALGAPBQ86X10 1494 aa14.83□□□□□ -0.03
CCDC38-207ENST00000549752 VPS72Q15906 364 aa14.83□□□□□ -0.04
CCDC38-207ENST00000549752 EP400Q96L91 3159 aa14.82□□□□□ -0.04
CCDC38-207ENST00000549752 CABP2Q9NPB3 220 aa14.82□□□□□ -0.04
CCDC38-207ENST00000549752 CCDC9Q9Y3X0 531 aaKnown RBP14.82□□□□□ -0.04
CCDC38-207ENST00000549752 SBNO2Q9Y2G9 1366 aa14.82□□□□□ -0.04
CCDC38-207ENST00000549752 FAM83GA6ND36 823 aa14.81□□□□□ -0.04
CCDC38-207ENST00000549752 ABTB2Q8N961 1025 aa14.81□□□□□ -0.04
CCDC38-207ENST00000549752 CARD11Q9BXL7 1154 aa14.81□□□□□ -0.04
CCDC38-207ENST00000549752 PRDM11Q9NQV5 511 aa14.81□□□□□ -0.04
CCDC38-207ENST00000549752 NLRP13Q86W25 1043 aa14.8□□□□□ -0.04
CCDC38-207ENST00000549752 BTG4Q9NY30 223 aa14.8□□□□□ -0.04
CCDC38-207ENST00000549752 NRKQ7Z2Y5 1582 aa14.79□□□□□ -0.04
CCDC38-207ENST00000549752 CCDC125Q86Z20 511 aa14.79□□□□□ -0.04
CCDC38-207ENST00000549752 MON2Q7Z3U7 1717 aa14.78□□□□□ -0.04
CCDC38-207ENST00000549752 USP6P35125 1406 aa14.78□□□□□ -0.04
CCDC38-207ENST00000549752 ZNF692Q9BU19 519 aaPredicted RBP14.78□□□□□ -0.04
CCDC38-207ENST00000549752 CABP1Q9NZU7 370 aa14.78□□□□□ -0.04
CCDC38-207ENST00000549752 KIAA0232Q92628 1395 aa14.76□□□□□ -0.05
CCDC38-207ENST00000549752 ONECUT3O60422 494 aaPredicted RBP14.76□□□□□ -0.05
CCDC38-207ENST00000549752 FBXO3Q9UK99 471 aa14.76□□□□□ -0.05
CCDC38-207ENST00000549752 PIK3C2AO00443 1686 aa14.75□□□□□ -0.05
CCDC38-207ENST00000549752 USP19O94966 1318 aa14.75□□□□□ -0.05
CCDC38-207ENST00000549752 A0A0G2JS52 829 aa14.75□□□□□ -0.05
CCDC38-207ENST00000549752 MYT1Q01538 1121 aa14.75□□□□□ -0.05
CCDC38-207ENST00000549752 NUTM2GQ5VZR2 741 aa14.75□□□□□ -0.05
CCDC38-207ENST00000549752 SEPT12Q8IYM1 358 aa14.75□□□□□ -0.05
CCDC38-207ENST00000549752 CPDO75976 1380 aa14.74□□□□□ -0.05
CCDC38-207ENST00000549752 CLSPNQ9HAW4 1339 aa14.74□□□□□ -0.05
CCDC38-207ENST00000549752 LMO7Q8WWI1 1683 aa14.74□□□□□ -0.05
CCDC38-207ENST00000549752 SPATA31A5Q5VU36 1347 aa14.73□□□□□ -0.05
CCDC38-207ENST00000549752 SPATA31A7Q8IWB4 1347 aa14.73□□□□□ -0.05
CCDC38-207ENST00000549752 EVA1CP58658 441 aa14.73□□□□□ -0.05
CCDC38-207ENST00000549752 ZC3H6P61129 1189 aaKnown RBP14.73□□□□□ -0.05
CCDC38-207ENST00000549752 TTC21AQ8NDW8 1320 aa14.72□□□□□ -0.05
CCDC38-207ENST00000549752 NLRP6P59044 892 aa14.72□□□□□ -0.05
CCDC38-207ENST00000549752 KRT27Q7Z3Y8 459 aa14.72□□□□□ -0.05
CCDC38-207ENST00000549752 PUS7Q96PZ0 661 aaKnown RBP14.72□□□□□ -0.05
CCDC38-207ENST00000549752 TIMELESSQ9UNS1 1208 aa14.72□□□□□ -0.05
CCDC38-207ENST00000549752 RGPD1P0DJD0 1748 aa14.72□□□□□ -0.05
CCDC38-207ENST00000549752 SLIT3O75094 1523 aa14.71□□□□□ -0.05
CCDC38-207ENST00000549752 THSD7AQ9UPZ6 1657 aa14.71□□□□□ -0.05
CCDC38-207ENST00000549752 RGPD5Q99666 1765 aa14.71□□□□□ -0.05
CCDC38-207ENST00000549752 GCP02774 474 aa14.71□□□□□ -0.05
CCDC38-207ENST00000549752 SF3B2Q13435 895 aaKnown RBP14.71□□□□□ -0.05
CCDC38-207ENST00000549752 CHRNA2Q15822 529 aa14.71□□□□□ -0.05
CCDC38-207ENST00000549752 SSH2Q76I76 1423 aa14.71□□□□□ -0.05
CCDC38-207ENST00000549752 KTN1Q86UP2 1357 aaKnown RBP14.71□□□□□ -0.06
CCDC38-207ENST00000549752 USP54Q70EL1 1684 aa14.71□□□□□ -0.06
CCDC38-207ENST00000549752 BLMP54132 1417 aaPredicted RBP14.7□□□□□ -0.06
CCDC38-207ENST00000549752 CPSF1Q10570 1443 aaKnown RBP14.7□□□□□ -0.06
CCDC38-207ENST00000549752 FAM98CQ17RN3 349 aaKnown RBP14.7□□□□□ -0.06
CCDC38-207ENST00000549752 KCNH5Q8NCM2 988 aa14.7□□□□□ -0.06
CCDC38-207ENST00000549752 STRN4Q9NRL3 753 aa14.7□□□□□ -0.06
CCDC38-207ENST00000549752 HDGFL2Q7Z4V5 671 aaPredicted RBP14.69□□□□□ -0.06
CCDC38-207ENST00000549752 NINLQ9Y2I6 1382 aa14.69□□□□□ -0.06
CCDC38-207ENST00000549752 SPATA31A1Q5TZJ5 1347 aa14.68□□□□□ -0.06
CCDC38-207ENST00000549752 TTC21BQ7Z4L5 1316 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms