RNA–Protein interactions for RNA: ENST00000549349.5

CALCOCO1-213, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-213ENST00000549349 PIK3C2AO00443 1686 aa13.24□□□□□ -0.29
CALCOCO1-213ENST00000549349 USP6P35125 1406 aa13.23□□□□□ -0.29
CALCOCO1-213ENST00000549349 LMOD2Q6P5Q4 547 aa13.23□□□□□ -0.29
CALCOCO1-213ENST00000549349 HDGFL2Q7Z4V5 671 aaPredicted RBP13.23□□□□□ -0.29
CALCOCO1-213ENST00000549349 ANKRD36BQ8N2N9 1353 aa13.22□□□□□ -0.29
CALCOCO1-213ENST00000549349 NUTM2GQ5VZR2 741 aa13.22□□□□□ -0.29
CALCOCO1-213ENST00000549349 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.22□□□□□ -0.29
CALCOCO1-213ENST00000549349 ZNF692Q9BU19 519 aaPredicted RBP13.22□□□□□ -0.29
CALCOCO1-213ENST00000549349 ZRANB1Q9UGI0 708 aa13.22□□□□□ -0.29
CALCOCO1-213ENST00000549349 SSH2Q76I76 1423 aa13.22□□□□□ -0.29
CALCOCO1-213ENST00000549349 SHPRHQ149N8 1683 aa13.21□□□□□ -0.29
CALCOCO1-213ENST00000549349 NINLQ9Y2I6 1382 aa13.21□□□□□ -0.29
CALCOCO1-213ENST00000549349 TERF2IPQ9NYB0 399 aa13.21□□□□□ -0.29
CALCOCO1-213ENST00000549349 ABCA3Q99758 1704 aa13.21□□□□□ -0.3
CALCOCO1-213ENST00000549349 CRYBG1Q9Y4K1 1723 aa13.21□□□□□ -0.3
CALCOCO1-213ENST00000549349 MAP2P11137 1827 aaKnown RBP13.2□□□□□ -0.3
CALCOCO1-213ENST00000549349 SPATA31A3Q5VYP0 1347 aa13.2□□□□□ -0.3
CALCOCO1-213ENST00000549349 TTC21BQ7Z4L5 1316 aa13.2□□□□□ -0.3
CALCOCO1-213ENST00000549349 DDX10Q13206 875 aaKnown RBP13.2□□□□□ -0.3
CALCOCO1-213ENST00000549349 TNS3Q68CZ2 1445 aa13.2□□□□□ -0.3
CALCOCO1-213ENST00000549349 NSD3Q9BZ95 1437 aa13.2□□□□□ -0.3
CALCOCO1-213ENST00000549349 SBNO1A3KN83 1393 aa13.2□□□□□ -0.3
CALCOCO1-213ENST00000549349 NME9Q86XW9 330 aa13.19□□□□□ -0.3
CALCOCO1-213ENST00000549349 LRRC59Q96AG4 307 aaKnown RBP13.19□□□□□ -0.3
CALCOCO1-213ENST00000549349 ANKRD26Q9UPS8 1709 aa13.19□□□□□ -0.3
CALCOCO1-213ENST00000549349 COL22A1Q8NFW1 1626 aaPredicted RBP13.18□□□□□ -0.3
CALCOCO1-213ENST00000549349 PHRF1Q9P1Y6 1649 aaKnown RBP13.18□□□□□ -0.3
CALCOCO1-213ENST00000549349 RGPD5Q99666 1765 aa13.18□□□□□ -0.3
CALCOCO1-213ENST00000549349 ABTB2Q8N961 1025 aa13.18□□□□□ -0.3
CALCOCO1-213ENST00000549349 CABLES1Q8TDN4 633 aa13.18□□□□□ -0.3
CALCOCO1-213ENST00000549349 EDC4Q6P2E9 1401 aaKnown RBP13.18□□□□□ -0.3
CALCOCO1-213ENST00000549349 PNPLA6Q8IY17 1366 aa13.18□□□□□ -0.3
CALCOCO1-213ENST00000549349 CNGB1Q14028 1251 aaPredicted RBP13.17□□□□□ -0.3
CALCOCO1-213ENST00000549349 MED1Q15648 1581 aaPredicted RBP13.16□□□□□ -0.3
CALCOCO1-213ENST00000549349 USP54Q70EL1 1684 aa13.16□□□□□ -0.3
CALCOCO1-213ENST00000549349 LTN1O94822 1766 aa13.16□□□□□ -0.3
CALCOCO1-213ENST00000549349 NUTM2BA6NNL0 878 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO1-213ENST00000549349 NUTM2EB1AL46 878 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO1-213ENST00000549349 FYB1O15117 783 aa13.15□□□□□ -0.3
CALCOCO1-213ENST00000549349 PER1O15534 1290 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO1-213ENST00000549349 NLRP6P59044 892 aa13.15□□□□□ -0.3
CALCOCO1-213ENST00000549349 NUTM2AQ8IVF1 878 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO1-213ENST00000549349 GGNBP2Q9H3C7 697 aa13.15□□□□□ -0.3
CALCOCO1-213ENST00000549349 JCADQ9P266 1359 aa13.15□□□□□ -0.3
CALCOCO1-213ENST00000549349 TTC21AQ8NDW8 1320 aa13.14□□□□□ -0.31
CALCOCO1-213ENST00000549349 FBLN1P23142 703 aa13.14□□□□□ -0.31
CALCOCO1-213ENST00000549349 ARHGEF10O15013 1369 aa13.13□□□□□ -0.31
CALCOCO1-213ENST00000549349 BRD4O60885 1362 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO1-213ENST00000549349 SOX12O15370 315 aa13.13□□□□□ -0.31
CALCOCO1-213ENST00000549349 NLRP13Q86W25 1043 aa13.12□□□□□ -0.31
CALCOCO1-213ENST00000549349 KNSTRNQ9Y448 316 aa13.12□□□□□ -0.31
CALCOCO1-213ENST00000549349 LRP6O75581 1613 aa13.11□□□□□ -0.31
CALCOCO1-213ENST00000549349 AMER1Q5JTC6 1135 aaPredicted RBP13.11□□□□□ -0.31
CALCOCO1-213ENST00000549349 CC2D1BQ5T0F9 858 aaKnown RBP13.11□□□□□ -0.31
CALCOCO1-213ENST00000549349 OVOS2A0A0J9YW53 1432 aa13.11□□□□□ -0.31
CALCOCO1-213ENST00000549349 OVOS2Q6IE36 1432 aa13.11□□□□□ -0.31
CALCOCO1-213ENST00000549349 USP31Q70CQ4 1352 aa13.1□□□□□ -0.31
CALCOCO1-213ENST00000549349 SLIT3O75094 1523 aa13.1□□□□□ -0.31
CALCOCO1-213ENST00000549349 ADAMTS2O95450 1211 aa13.1□□□□□ -0.31
CALCOCO1-213ENST00000549349 ZC3H6P61129 1189 aaKnown RBP13.1□□□□□ -0.31
CALCOCO1-213ENST00000549349 USP19O94966 1318 aa13.1□□□□□ -0.31
CALCOCO1-213ENST00000549349 CGNL1Q0VF96 1302 aa13.1□□□□□ -0.31
CALCOCO1-213ENST00000549349 GCP02774 474 aa13.09□□□□□ -0.31
CALCOCO1-213ENST00000549349 TNNT2P45379 298 aaPredicted RBP13.09□□□□□ -0.31
CALCOCO1-213ENST00000549349 HAP1P54257 671 aaPredicted RBP13.09□□□□□ -0.31
CALCOCO1-213ENST00000549349 COG3Q96JB2 828 aa13.09□□□□□ -0.31
CALCOCO1-213ENST00000549349 COL18A1P39060 1754 aa13.09□□□□□ -0.31
CALCOCO1-213ENST00000549349 RGPD2P0DJD1 1756 aa13.08□□□□□ -0.32
CALCOCO1-213ENST00000549349 ZBTB7CA1YPR0 619 aa13.08□□□□□ -0.32
CALCOCO1-213ENST00000549349 PLCH1Q4KWH8 1693 aa13.08□□□□□ -0.32
CALCOCO1-213ENST00000549349 NFAT5O94916 1531 aa13.08□□□□□ -0.32
CALCOCO1-213ENST00000549349 CHRNA2Q15822 529 aa13.07□□□□□ -0.32
CALCOCO1-213ENST00000549349 SPATA31A6Q5VVP1 1343 aa13.07□□□□□ -0.32
CALCOCO1-213ENST00000549349 PEAK1Q9H792 1746 aa13.06□□□□□ -0.32
CALCOCO1-213ENST00000549349 FAM83GA6ND36 823 aa13.05□□□□□ -0.32
CALCOCO1-213ENST00000549349 RRS1Q15050 365 aaKnown RBP13.05□□□□□ -0.32
CALCOCO1-213ENST00000549349 MORC1Q86VD1 984 aa13.05□□□□□ -0.32
CALCOCO1-213ENST00000549349 KIAA0232Q92628 1395 aa13.05□□□□□ -0.32
CALCOCO1-213ENST00000549349 COL14A1Q05707 1796 aaKnown RBP13.04□□□□□ -0.32
CALCOCO1-213ENST00000549349 MEX3CQ5U5Q3 659 aaKnown RBP13.04□□□□□ -0.32
CALCOCO1-213ENST00000549349 C8orf37Q96NL8 207 aa13.04□□□□□ -0.32
CALCOCO1-213ENST00000549349 NRAPQ86VF7 1730 aa13.03□□□□□ -0.32
CALCOCO1-213ENST00000549349 KCNH5Q8NCM2 988 aa13.03□□□□□ -0.32
CALCOCO1-213ENST00000549349 NSD2O96028 1365 aa13.03□□□□□ -0.32
CALCOCO1-213ENST00000549349 LMO7Q8WWI1 1683 aa13.02□□□□□ -0.32
CALCOCO1-213ENST00000549349 NWD2Q9ULI1 1742 aa13.02□□□□□ -0.32
CALCOCO1-213ENST00000549349 ARHGEF25Q86VW2 580 aa13.02□□□□□ -0.33
CALCOCO1-213ENST00000549349 PRDM11Q9NQV5 511 aa13.02□□□□□ -0.33
CALCOCO1-213ENST00000549349 EMILIN1Q9Y6C2 1016 aa13.02□□□□□ -0.33
CALCOCO1-213ENST00000549349 NPC1L1Q9UHC9 1359 aa13.02□□□□□ -0.33
CALCOCO1-213ENST00000549349 NGLY1Q96IV0 654 aa13.01□□□□□ -0.33
CALCOCO1-213ENST00000549349 AXIN2Q9Y2T1 843 aa13.01□□□□□ -0.33
CALCOCO1-213ENST00000549349 MAP3K19Q56UN5 1328 aa13.01□□□□□ -0.33
CALCOCO1-213ENST00000549349 CAMTA1Q9Y6Y1 1673 aa13.01□□□□□ -0.33
CALCOCO1-213ENST00000549349 PPM1GO15355 546 aaPredicted RBP13□□□□□ -0.33
CALCOCO1-213ENST00000549349 POLKQ9UBT6 870 aa13□□□□□ -0.33
CALCOCO1-213ENST00000549349 CPDO75976 1380 aa12.99□□□□□ -0.33
CALCOCO1-213ENST00000549349 AFF2P51816 1311 aa12.99□□□□□ -0.33
CALCOCO1-213ENST00000549349 BTG4Q9NY30 223 aa12.99□□□□□ -0.33
CALCOCO1-213ENST00000549349 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms