RNA–Protein interactions for RNA: ENST00000549340.5

LETMD1-218, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-218ENST00000549340 RGPD8O14715 1765 aaPredicted RBP19.35■□□□□ 0.69
LETMD1-218ENST00000549340 SALL2Q9Y467 1007 aaPredicted RBP19.35■□□□□ 0.69
LETMD1-218ENST00000549340 RUNDC1Q96C34 613 aa19.34■□□□□ 0.69
LETMD1-218ENST00000549340 NALCNQ8IZF0 1738 aa19.34■□□□□ 0.69
LETMD1-218ENST00000549340 SENP3-EIF4A1A0A087X0R7 540 aa19.33■□□□□ 0.68
LETMD1-218ENST00000549340 APAF1O14727 1248 aa19.33■□□□□ 0.68
LETMD1-218ENST00000549340 NKTRP30414 1462 aaKnown RBP19.33■□□□□ 0.68
LETMD1-218ENST00000549340 NPHP4O75161 1426 aaPredicted RBP19.33■□□□□ 0.68
LETMD1-218ENST00000549340 NWD1Q149M9 1564 aa19.32■□□□□ 0.68
LETMD1-218ENST00000549340 GOLGA2Q08379 1002 aa19.32■□□□□ 0.68
LETMD1-218ENST00000549340 CCDC146Q8IYE0 955 aa19.32■□□□□ 0.68
LETMD1-218ENST00000549340 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.31■□□□□ 0.68
LETMD1-218ENST00000549340 CDCA7LQ96GN5 454 aa19.31■□□□□ 0.68
LETMD1-218ENST00000549340 RCAN3Q9UKA8 241 aa19.31■□□□□ 0.68
LETMD1-218ENST00000549340 USP6P35125 1406 aa19.31■□□□□ 0.68
LETMD1-218ENST00000549340 CDK12Q9NYV4 1490 aaPredicted RBP19.3■□□□□ 0.68
LETMD1-218ENST00000549340 KCNA6P17658 529 aa19.3■□□□□ 0.68
LETMD1-218ENST00000549340 PPP4R2Q9NY27 417 aa19.3■□□□□ 0.68
LETMD1-218ENST00000549340 SSH2Q76I76 1423 aa19.29■□□□□ 0.68
LETMD1-218ENST00000549340 TRMT2AQ8IZ69 625 aaKnown RBP19.29■□□□□ 0.68
LETMD1-218ENST00000549340 ACEP12821 1306 aa19.28■□□□□ 0.68
LETMD1-218ENST00000549340 USP54Q70EL1 1684 aa19.28■□□□□ 0.68
LETMD1-218ENST00000549340 SLFN5Q08AF3 891 aa19.28■□□□□ 0.68
LETMD1-218ENST00000549340 COG3Q96JB2 828 aa19.28■□□□□ 0.68
LETMD1-218ENST00000549340 TTC21BQ7Z4L5 1316 aa19.27■□□□□ 0.68
LETMD1-218ENST00000549340 TTC21AQ8NDW8 1320 aa19.27■□□□□ 0.68
LETMD1-218ENST00000549340 NCKAP5LQ9HCH0 1330 aa19.27■□□□□ 0.68
LETMD1-218ENST00000549340 CCDC27Q2M243 656 aa19.27■□□□□ 0.68
LETMD1-218ENST00000549340 DUSP27Q5VZP5 1158 aa19.27■□□□□ 0.68
LETMD1-218ENST00000549340 PNNQ9H307 717 aaKnown RBP19.27■□□□□ 0.68
LETMD1-218ENST00000549340 OVOS2A0A0J9YW53 1432 aa19.26■□□□□ 0.67
LETMD1-218ENST00000549340 OVOS2Q6IE36 1432 aa19.26■□□□□ 0.67
LETMD1-218ENST00000549340 E9PSI1 815 aa19.26■□□□□ 0.67
LETMD1-218ENST00000549340 DIAPH1O60610 1272 aaKnown RBP19.26■□□□□ 0.67
LETMD1-218ENST00000549340 RRP1P56182 461 aaKnown RBP19.26■□□□□ 0.67
LETMD1-218ENST00000549340 IRX6P78412 446 aaPredicted RBP19.26■□□□□ 0.67
LETMD1-218ENST00000549340 NME9Q86XW9 330 aa19.26■□□□□ 0.67
LETMD1-218ENST00000549340 POLKQ9UBT6 870 aa19.26■□□□□ 0.67
LETMD1-218ENST00000549340 LRRC7Q96NW7 1537 aa19.25■□□□□ 0.67
LETMD1-218ENST00000549340 U2AF1L5P0DN76 240 aaPredicted RBP19.25■□□□□ 0.67
LETMD1-218ENST00000549340 U2AF1Q01081 240 aaKnown RBP eCLIP19.25■□□□□ 0.67
LETMD1-218ENST00000549340 TCP11L2Q8N4U5 519 aa19.24■□□□□ 0.67
LETMD1-218ENST00000549340 ADGRL3Q9HAR2 1447 aa19.24■□□□□ 0.67
LETMD1-218ENST00000549340 USP31Q70CQ4 1352 aa19.22■□□□□ 0.67
LETMD1-218ENST00000549340 WDR63Q8IWG1 891 aa19.22■□□□□ 0.67
LETMD1-218ENST00000549340 WWC1Q8IX03 1113 aa19.22■□□□□ 0.67
LETMD1-218ENST00000549340 PLEKHF1Q96S99 279 aa19.21■□□□□ 0.67
LETMD1-218ENST00000549340 PIK3C2AO00443 1686 aa19.2■□□□□ 0.66
LETMD1-218ENST00000549340 U2SURPO15042 1029 aaKnown RBP19.19■□□□□ 0.66
LETMD1-218ENST00000549340 FCHSD2O94868 740 aa19.19■□□□□ 0.66
LETMD1-218ENST00000549340 ZRANB1Q9UGI0 708 aa19.18■□□□□ 0.66
LETMD1-218ENST00000549340 MARF1Q9Y4F3 1742 aaKnown RBP19.17■□□□□ 0.66
LETMD1-218ENST00000549340 NUTM2FA1L443 756 aa19.17■□□□□ 0.66
LETMD1-218ENST00000549340 NGDNQ8NEJ9 315 aaKnown RBP19.17■□□□□ 0.66
LETMD1-218ENST00000549340 MAPK8IP3Q9UPT6 1336 aa19.17■□□□□ 0.66
LETMD1-218ENST00000549340 IL13P35225 146 aa19.15■□□□□ 0.66
LETMD1-218ENST00000549340 EMILIN1Q9Y6C2 1016 aa19.15■□□□□ 0.66
LETMD1-218ENST00000549340 PEAK1Q9H792 1746 aa19.14■□□□□ 0.66
LETMD1-218ENST00000549340 TMPOP42166 694 aaKnown RBP19.14■□□□□ 0.65
LETMD1-218ENST00000549340 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.13■□□□□ 0.65
LETMD1-218ENST00000549340 PMFBP1Q8TBY8 1022 aa19.13■□□□□ 0.65
LETMD1-218ENST00000549340 RSPH6AQ9H0K4 717 aa19.13■□□□□ 0.65
LETMD1-218ENST00000549340 SPINK5Q9NQ38 1064 aaPredicted RBP19.13■□□□□ 0.65
LETMD1-218ENST00000549340 IL16Q14005 1332 aa19.13■□□□□ 0.65
LETMD1-218ENST00000549340 RGPD1P0DJD0 1748 aa19.13■□□□□ 0.65
LETMD1-218ENST00000549340 KIF1AQ12756 1690 aa19.12■□□□□ 0.65
LETMD1-218ENST00000549340 NEFMP07197 916 aa19.12■□□□□ 0.65
LETMD1-218ENST00000549340 DMRT2Q9Y5R5 561 aa19.12■□□□□ 0.65
LETMD1-218ENST00000549340 NCOA3Q9Y6Q9 1424 aa19.11■□□□□ 0.65
LETMD1-218ENST00000549340 KIF24Q5T7B8 1368 aa19.11■□□□□ 0.65
LETMD1-218ENST00000549340 PPM1GO15355 546 aaPredicted RBP19.11■□□□□ 0.65
LETMD1-218ENST00000549340 PHF8Q9UPP1 1060 aa19.11■□□□□ 0.65
LETMD1-218ENST00000549340 RRP7AQ9Y3A4 280 aaKnown RBP19.11■□□□□ 0.65
LETMD1-218ENST00000549340 DLG5Q8TDM6 1919 aa19.1■□□□□ 0.65
LETMD1-218ENST00000549340 FBLN1P23142 703 aa19.1■□□□□ 0.65
LETMD1-218ENST00000549340 NEUROD2Q15784 382 aa19.1■□□□□ 0.65
LETMD1-218ENST00000549340 MYH16Q9H6N6 1097 aa19.1■□□□□ 0.65
LETMD1-218ENST00000549340 RRS1Q15050 365 aaKnown RBP19.09■□□□□ 0.65
LETMD1-218ENST00000549340 SBNO1A3KN83 1393 aa19.07■□□□□ 0.64
LETMD1-218ENST00000549340 STRCP1A6NGW2 1772 aa19.07■□□□□ 0.64
LETMD1-218ENST00000549340 CT47B1P0C2W7 299 aaPredicted RBP19.07■□□□□ 0.64
LETMD1-218ENST00000549340 TRIM35Q9UPQ4 493 aa19.07■□□□□ 0.64
LETMD1-218ENST00000549340 PRKAR2BP31323 418 aa19.06■□□□□ 0.64
LETMD1-218ENST00000549340 ILDR1Q86SU0 546 aaPredicted RBP19.06■□□□□ 0.64
LETMD1-218ENST00000549340 DCCP43146 1447 aa19.06■□□□□ 0.64
LETMD1-218ENST00000549340 FLT4P35916 1363 aa19.06■□□□□ 0.64
LETMD1-218ENST00000549340 NFE2L2Q16236 605 aa19.05■□□□□ 0.64
LETMD1-218ENST00000549340 B4GALNT3Q6L9W6 998 aa19.05■□□□□ 0.64
LETMD1-218ENST00000549340 CCDC136Q96JN2 1154 aa19.05■□□□□ 0.64
LETMD1-218ENST00000549340 PHRF1Q9P1Y6 1649 aaKnown RBP19.04■□□□□ 0.64
LETMD1-218ENST00000549340 RIPK4P57078 832 aa19.04■□□□□ 0.64
LETMD1-218ENST00000549340 PROSER2Q86WR7 435 aaPredicted RBP19.04■□□□□ 0.64
LETMD1-218ENST00000549340 EXOC6Q8TAG9 804 aa19.04■□□□□ 0.64
LETMD1-218ENST00000549340 EIF4A2Q14240 407 aaKnown RBP19.03■□□□□ 0.64
LETMD1-218ENST00000549340 LTN1O94822 1766 aa19.03■□□□□ 0.64
LETMD1-218ENST00000549340 ARHGEF10O15013 1369 aa19.03■□□□□ 0.64
LETMD1-218ENST00000549340 TRPM3Q9HCF6 1732 aaPredicted RBP19.03■□□□□ 0.64
LETMD1-218ENST00000549340 NLRP6P59044 892 aa19.02■□□□□ 0.64
LETMD1-218ENST00000549340 CALD1Q05682 793 aaKnown RBP19.02■□□□□ 0.64
LETMD1-218ENST00000549340 LMOD3Q0VAK6 560 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms