RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 PXDNQ92626 1479 aa13.36□□□□□ -0.27
RAB5B-205ENST00000549034 POLR3AO14802 1390 aaPredicted RBP13.36□□□□□ -0.27
RAB5B-205ENST00000549034 MEX3CQ5U5Q3 659 aaKnown RBP13.36□□□□□ -0.27
RAB5B-205ENST00000549034 HDGFL2Q7Z4V5 671 aaPredicted RBP13.36□□□□□ -0.27
RAB5B-205ENST00000549034 SPATA31A6Q5VVP1 1343 aa13.36□□□□□ -0.27
RAB5B-205ENST00000549034 SBNO1A3KN83 1393 aa13.35□□□□□ -0.27
RAB5B-205ENST00000549034 HAP1P54257 671 aaPredicted RBP13.35□□□□□ -0.27
RAB5B-205ENST00000549034 NUTM2GQ5VZR2 741 aa13.35□□□□□ -0.27
RAB5B-205ENST00000549034 ABTB2Q8N961 1025 aa13.35□□□□□ -0.27
RAB5B-205ENST00000549034 TERF2IPQ9NYB0 399 aa13.35□□□□□ -0.27
RAB5B-205ENST00000549034 PNPLA6Q8IY17 1366 aa13.34□□□□□ -0.27
RAB5B-205ENST00000549034 C11orf95C9JLR9 678 aaPredicted RBP13.34□□□□□ -0.27
RAB5B-205ENST00000549034 CABLES1Q8TDN4 633 aa13.34□□□□□ -0.27
RAB5B-205ENST00000549034 TOPAZ1Q8N9V7 1692 aa13.34□□□□□ -0.27
RAB5B-205ENST00000549034 ADAMTS2O95450 1211 aa13.33□□□□□ -0.28
RAB5B-205ENST00000549034 KTN1Q86UP2 1357 aaKnown RBP13.32□□□□□ -0.28
RAB5B-205ENST00000549034 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.32□□□□□ -0.28
RAB5B-205ENST00000549034 TNS3Q68CZ2 1445 aa13.31□□□□□ -0.28
RAB5B-205ENST00000549034 SHPRHQ149N8 1683 aa13.31□□□□□ -0.28
RAB5B-205ENST00000549034 TTC21BQ7Z4L5 1316 aa13.31□□□□□ -0.28
RAB5B-205ENST00000549034 ARHGEF10O15013 1369 aa13.31□□□□□ -0.28
RAB5B-205ENST00000549034 NLRP6P59044 892 aa13.3□□□□□ -0.28
RAB5B-205ENST00000549034 NLRP13Q86W25 1043 aa13.3□□□□□ -0.28
RAB5B-205ENST00000549034 CPSF1Q10570 1443 aaKnown RBP13.3□□□□□ -0.28
RAB5B-205ENST00000549034 NGLY1Q96IV0 654 aa13.29□□□□□ -0.28
RAB5B-205ENST00000549034 C8orf37Q96NL8 207 aa13.29□□□□□ -0.28
RAB5B-205ENST00000549034 TRPM3Q9HCF6 1732 aaPredicted RBP13.29□□□□□ -0.28
RAB5B-205ENST00000549034 BRD4O60885 1362 aaPredicted RBP13.29□□□□□ -0.28
RAB5B-205ENST00000549034 NINLQ9Y2I6 1382 aa13.29□□□□□ -0.28
RAB5B-205ENST00000549034 USP6P35125 1406 aa13.29□□□□□ -0.28
RAB5B-205ENST00000549034 AKAP12Q02952 1782 aa13.28□□□□□ -0.28
RAB5B-205ENST00000549034 TTC21AQ8NDW8 1320 aa13.27□□□□□ -0.29
RAB5B-205ENST00000549034 A0A1W2PP64 1363 aa13.27□□□□□ -0.29
RAB5B-205ENST00000549034 LRP6O75581 1613 aa13.26□□□□□ -0.29
RAB5B-205ENST00000549034 MED1Q15648 1581 aaPredicted RBP13.26□□□□□ -0.29
RAB5B-205ENST00000549034 NME9Q86XW9 330 aa13.26□□□□□ -0.29
RAB5B-205ENST00000549034 PANK3Q9H999 370 aa13.26□□□□□ -0.29
RAB5B-205ENST00000549034 CD163L1Q9NR16 1453 aa13.26□□□□□ -0.29
RAB5B-205ENST00000549034 ZRANB1Q9UGI0 708 aa13.26□□□□□ -0.29
RAB5B-205ENST00000549034 ALS2Q96Q42 1657 aa13.25□□□□□ -0.29
RAB5B-205ENST00000549034 COL22A1Q8NFW1 1626 aaPredicted RBP13.25□□□□□ -0.29
RAB5B-205ENST00000549034 SSH2Q76I76 1423 aa13.25□□□□□ -0.29
RAB5B-205ENST00000549034 ANKRD36BQ8N2N9 1353 aa13.25□□□□□ -0.29
RAB5B-205ENST00000549034 KIF7Q2M1P5 1343 aa13.25□□□□□ -0.29
RAB5B-205ENST00000549034 ZC3H6P61129 1189 aaKnown RBP13.25□□□□□ -0.29
RAB5B-205ENST00000549034 CARD14Q9BXL6 1004 aa13.25□□□□□ -0.29
RAB5B-205ENST00000549034 ZBTB7CA1YPR0 619 aa13.24□□□□□ -0.29
RAB5B-205ENST00000549034 FAM83GA6ND36 823 aa13.24□□□□□ -0.29
RAB5B-205ENST00000549034 SOX12O15370 315 aa13.24□□□□□ -0.29
RAB5B-205ENST00000549034 GCP02774 474 aa13.24□□□□□ -0.29
RAB5B-205ENST00000549034 AFF2P51816 1311 aa13.23□□□□□ -0.29
RAB5B-205ENST00000549034 RGS17Q9UGC6 210 aaPredicted RBP13.23□□□□□ -0.29
RAB5B-205ENST00000549034 EDC4Q6P2E9 1401 aaKnown RBP13.22□□□□□ -0.29
RAB5B-205ENST00000549034 MON2Q7Z3U7 1717 aa13.22□□□□□ -0.29
RAB5B-205ENST00000549034 FYB1O15117 783 aa13.22□□□□□ -0.29
RAB5B-205ENST00000549034 ZNF772Q68DY9 489 aaPredicted RBP13.22□□□□□ -0.29
RAB5B-205ENST00000549034 USP21Q9UK80 565 aa13.22□□□□□ -0.29
RAB5B-205ENST00000549034 WASHC2AQ641Q2 1341 aa13.21□□□□□ -0.29
RAB5B-205ENST00000549034 CHRNA2Q15822 529 aa13.21□□□□□ -0.29
RAB5B-205ENST00000549034 KCNH5Q8NCM2 988 aa13.21□□□□□ -0.29
RAB5B-205ENST00000549034 COG3Q96JB2 828 aa13.21□□□□□ -0.29
RAB5B-205ENST00000549034 GGNBP2Q9H3C7 697 aa13.21□□□□□ -0.29
RAB5B-205ENST00000549034 QTRT2Q9H974 415 aaKnown RBP13.21□□□□□ -0.29
RAB5B-205ENST00000549034 PRDM11Q9NQV5 511 aa13.21□□□□□ -0.29
RAB5B-205ENST00000549034 CCDC7Q96M83 1385 aa13.2□□□□□ -0.3
RAB5B-205ENST00000549034 SLC4A2P04920 1241 aa13.2□□□□□ -0.3
RAB5B-205ENST00000549034 FNBP4Q8N3X1 1017 aaPredicted RBP13.2□□□□□ -0.3
RAB5B-205ENST00000549034 USP19O94966 1318 aa13.19□□□□□ -0.3
RAB5B-205ENST00000549034 POTEAQ6S8J7 498 aa13.19□□□□□ -0.3
RAB5B-205ENST00000549034 BTG4Q9NY30 223 aa13.19□□□□□ -0.3
RAB5B-205ENST00000549034 KNSTRNQ9Y448 316 aa13.19□□□□□ -0.3
RAB5B-205ENST00000549034 MARF1Q9Y4F3 1742 aaKnown RBP13.19□□□□□ -0.3
RAB5B-205ENST00000549034 USP31Q70CQ4 1352 aa13.19□□□□□ -0.3
RAB5B-205ENST00000549034 KIAA0232Q92628 1395 aa13.19□□□□□ -0.3
RAB5B-205ENST00000549034 MYOM1P52179 1685 aa13.18□□□□□ -0.3
RAB5B-205ENST00000549034 EVA1CP58658 441 aa13.18□□□□□ -0.3
RAB5B-205ENST00000549034 NSD3Q9BZ95 1437 aa13.18□□□□□ -0.3
RAB5B-205ENST00000549034 PIK3C2AO00443 1686 aa13.18□□□□□ -0.3
RAB5B-205ENST00000549034 CGNL1Q0VF96 1302 aa13.17□□□□□ -0.3
RAB5B-205ENST00000549034 FBLN1P23142 703 aa13.17□□□□□ -0.3
RAB5B-205ENST00000549034 UNC5CLQ8IV45 518 aa13.17□□□□□ -0.3
RAB5B-205ENST00000549034 TRPC5Q9UL62 973 aaPredicted RBP13.17□□□□□ -0.3
RAB5B-205ENST00000549034 NRKQ7Z2Y5 1582 aa13.16□□□□□ -0.3
RAB5B-205ENST00000549034 RXRBP28702 533 aa13.16□□□□□ -0.3
RAB5B-205ENST00000549034 ARHGEF25Q86VW2 580 aa13.16□□□□□ -0.3
RAB5B-205ENST00000549034 STRN4Q9NRL3 753 aa13.16□□□□□ -0.3
RAB5B-205ENST00000549034 CCDC9Q9Y3X0 531 aaKnown RBP13.16□□□□□ -0.3
RAB5B-205ENST00000549034 ABCA3Q99758 1704 aa13.16□□□□□ -0.3
RAB5B-205ENST00000549034 PHRF1Q9P1Y6 1649 aaKnown RBP13.15□□□□□ -0.3
RAB5B-205ENST00000549034 CNGB1Q14028 1251 aaPredicted RBP13.15□□□□□ -0.3
RAB5B-205ENST00000549034 CRYBG1Q9Y4K1 1723 aa13.15□□□□□ -0.3
RAB5B-205ENST00000549034 BCL9LQ86UU0 1499 aa13.13□□□□□ -0.31
RAB5B-205ENST00000549034 CPDO75976 1380 aa13.13□□□□□ -0.31
RAB5B-205ENST00000549034 PER1O15534 1290 aaPredicted RBP13.13□□□□□ -0.31
RAB5B-205ENST00000549034 TNNT2P45379 298 aaPredicted RBP13.13□□□□□ -0.31
RAB5B-205ENST00000549034 RBM6P78332 1123 aaKnown RBP13.13□□□□□ -0.31
RAB5B-205ENST00000549034 AXIN2Q9Y2T1 843 aa13.13□□□□□ -0.31
RAB5B-205ENST00000549034 SLIT3O75094 1523 aa13.13□□□□□ -0.31
RAB5B-205ENST00000549034 AMPHP49418 695 aa13.12□□□□□ -0.31
RAB5B-205ENST00000549034 ILDR2Q71H61 639 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms