RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 CTC1Q2NKJ3 1217 aa10.49□□□□□ -0.73
UBE2N-202ENST00000548946 LINC01559Q495D7 138 aa10.49□□□□□ -0.73
UBE2N-202ENST00000548946 RTL5Q5HYW3 569 aaPredicted RBP10.49□□□□□ -0.73
UBE2N-202ENST00000548946 AAASQ9NRG9 546 aa10.49□□□□□ -0.73
UBE2N-202ENST00000548946 J3QL48 77 aa10.48□□□□□ -0.73
UBE2N-202ENST00000548946 F12P00748 615 aaPredicted RBP10.48□□□□□ -0.73
UBE2N-202ENST00000548946 SMPD1P17405 629 aa10.48□□□□□ -0.73
UBE2N-202ENST00000548946 CRIPAKQ8N1N5 446 aa10.48□□□□□ -0.73
UBE2N-202ENST00000548946 ZNF511Q8NB15 262 aa10.48□□□□□ -0.73
UBE2N-202ENST00000548946 AXIN1O15169 862 aa10.47□□□□□ -0.73
UBE2N-202ENST00000548946 ST8SIA5O15466 376 aa10.47□□□□□ -0.73
UBE2N-202ENST00000548946 PER1O15534 1290 aaPredicted RBP10.47□□□□□ -0.73
UBE2N-202ENST00000548946 MAP10Q9P2G4 905 aa10.47□□□□□ -0.73
UBE2N-202ENST00000548946 SIAH2O43255 324 aa10.46□□□□□ -0.73
UBE2N-202ENST00000548946 ALDH1A1P00352 501 aa10.46□□□□□ -0.73
UBE2N-202ENST00000548946 SMCPP49901 116 aaPredicted RBP10.46□□□□□ -0.73
UBE2N-202ENST00000548946 PLEKHG3A1L390 1219 aa10.45□□□□□ -0.74
UBE2N-202ENST00000548946 VARSP26640 1264 aaKnown RBP10.45□□□□□ -0.74
UBE2N-202ENST00000548946 NEUROD2Q15784 382 aa10.45□□□□□ -0.74
UBE2N-202ENST00000548946 ARMC2Q8NEN0 867 aa10.44□□□□□ -0.74
UBE2N-202ENST00000548946 PROCA1Q8NCQ7 364 aaPredicted RBP10.43□□□□□ -0.74
UBE2N-202ENST00000548946 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.43□□□□□ -0.74
UBE2N-202ENST00000548946 WASF2Q9Y6W5 498 aa10.42□□□□□ -0.74
UBE2N-202ENST00000548946 AGERQ15109 404 aa10.41□□□□□ -0.74
UBE2N-202ENST00000548946 TPRNQ4KMQ1 711 aa10.41□□□□□ -0.74
UBE2N-202ENST00000548946 PPP2R2DQ66LE6 453 aa10.41□□□□□ -0.74
UBE2N-202ENST00000548946 HPS1Q92902 700 aa10.41□□□□□ -0.74
UBE2N-202ENST00000548946 CTDSPL2Q05D32 466 aa10.4□□□□□ -0.74
UBE2N-202ENST00000548946 BPHLQ86WA6 291 aaPredicted RBP10.4□□□□□ -0.74
UBE2N-202ENST00000548946 FAM174AQ8TBP5 190 aa10.4□□□□□ -0.74
UBE2N-202ENST00000548946 NBPF14Q5TI25 921 aa10.39□□□□□ -0.75
UBE2N-202ENST00000548946 MPNDQ8N594 471 aa10.39□□□□□ -0.75
UBE2N-202ENST00000548946 GOPCQ9HD26 462 aa10.39□□□□□ -0.75
UBE2N-202ENST00000548946 DACH1Q9UI36 760 aa10.38□□□□□ -0.75
UBE2N-202ENST00000548946 IL27Q8NEV9 243 aa10.37□□□□□ -0.75
UBE2N-202ENST00000548946 FOXJ1Q92949 421 aa10.37□□□□□ -0.75
UBE2N-202ENST00000548946 PCMTD1Q96MG8 357 aaPredicted RBP10.37□□□□□ -0.75
UBE2N-202ENST00000548946 TLL2Q9Y6L7 1015 aa10.37□□□□□ -0.75
UBE2N-202ENST00000548946 POTECB2RU33 542 aa10.36□□□□□ -0.75
UBE2N-202ENST00000548946 AP1G2O75843 785 aa10.35□□□□□ -0.75
UBE2N-202ENST00000548946 BRPF1P55201 1214 aaPredicted RBP10.35□□□□□ -0.75
UBE2N-202ENST00000548946 GPKOWQ92917 476 aaPredicted RBP eCLIP10.35□□□□□ -0.75
UBE2N-202ENST00000548946 FBXO31Q5XUX0 539 aaPredicted RBP10.34□□□□□ -0.75
UBE2N-202ENST00000548946 LRRN4Q8WUT4 740 aa10.34□□□□□ -0.75
UBE2N-202ENST00000548946 ATP13A2Q9NQ11 1180 aa10.33□□□□□ -0.76
UBE2N-202ENST00000548946 GMPR2Q9P2T1 348 aaKnown RBP10.33□□□□□ -0.76
UBE2N-202ENST00000548946 C11orf95C9JLR9 678 aaPredicted RBP10.32□□□□□ -0.76
UBE2N-202ENST00000548946 ARID5BQ14865 1188 aa10.32□□□□□ -0.76
UBE2N-202ENST00000548946 CDK15Q96Q40 435 aa10.32□□□□□ -0.76
UBE2N-202ENST00000548946 CAPN5O15484 640 aaPredicted RBP10.31□□□□□ -0.76
UBE2N-202ENST00000548946 NNTQ13423 1086 aa10.31□□□□□ -0.76
UBE2N-202ENST00000548946 C4orf48Q5BLP8 95 aa10.31□□□□□ -0.76
UBE2N-202ENST00000548946 SH3RF1Q7Z6J0 888 aa10.31□□□□□ -0.76
UBE2N-202ENST00000548946 SENP2Q9HC62 589 aa10.31□□□□□ -0.76
UBE2N-202ENST00000548946 ADH1CP00326 375 aa10.3□□□□□ -0.76
UBE2N-202ENST00000548946 RFC5P40937 340 aa10.3□□□□□ -0.76
UBE2N-202ENST00000548946 SH3BP5LQ7L8J4 393 aa10.3□□□□□ -0.76
UBE2N-202ENST00000548946 ZNF775Q96BV0 537 aaPredicted RBP10.3□□□□□ -0.76
UBE2N-202ENST00000548946 FKBPLQ9UIM3 349 aa10.3□□□□□ -0.76
UBE2N-202ENST00000548946 MAGEB6P1A0A0J9YX57 407 aa10.29□□□□□ -0.76
UBE2N-202ENST00000548946 NR6A1Q15406 480 aa10.29□□□□□ -0.76
UBE2N-202ENST00000548946 PDXDC2PQ6P474 469 aa10.29□□□□□ -0.76
UBE2N-202ENST00000548946 PNMA1Q8ND90 353 aa10.29□□□□□ -0.76
UBE2N-202ENST00000548946 NR5A1Q13285 461 aa10.28□□□□□ -0.76
UBE2N-202ENST00000548946 TMEM259Q4ZIN3 620 aa10.28□□□□□ -0.76
UBE2N-202ENST00000548946 ZC3H4Q9UPT8 1303 aaKnown RBP10.28□□□□□ -0.76
UBE2N-202ENST00000548946 USP17L8P0C7I0 530 aa10.27□□□□□ -0.77
UBE2N-202ENST00000548946 KIFC2Q96AC6 838 aa10.27□□□□□ -0.77
UBE2N-202ENST00000548946 C1QTNF2Q9BXJ5 285 aa10.27□□□□□ -0.77
UBE2N-202ENST00000548946 WDR4P57081 412 aaKnown RBP10.26□□□□□ -0.77
UBE2N-202ENST00000548946 TRMT44Q8IYL2 757 aaKnown RBP10.26□□□□□ -0.77
UBE2N-202ENST00000548946 ARHGAP9Q9BRR9 750 aa10.26□□□□□ -0.77
UBE2N-202ENST00000548946 CARD14Q9BXL6 1004 aa10.26□□□□□ -0.77
UBE2N-202ENST00000548946 TRIM47Q96LD4 638 aa10.25□□□□□ -0.77
UBE2N-202ENST00000548946 MAP4K5Q9Y4K4 846 aa10.25□□□□□ -0.77
UBE2N-202ENST00000548946 GRM5P41594 1212 aa10.24□□□□□ -0.77
UBE2N-202ENST00000548946 PTK2Q05397 1052 aa10.24□□□□□ -0.77
UBE2N-202ENST00000548946 VASH1Q7L8A9 365 aaPredicted RBP10.24□□□□□ -0.77
UBE2N-202ENST00000548946 ERFEQ4G0M1 354 aa10.23□□□□□ -0.77
UBE2N-202ENST00000548946 ZBTB33Q86T24 672 aa10.23□□□□□ -0.77
UBE2N-202ENST00000548946 GPSM3Q9Y4H4 160 aa10.23□□□□□ -0.77
UBE2N-202ENST00000548946 TIMP2P16035 220 aa10.22□□□□□ -0.77
UBE2N-202ENST00000548946 HMX1Q9NP08 348 aaPredicted RBP10.22□□□□□ -0.77
UBE2N-202ENST00000548946 BMP1P13497 986 aa10.21□□□□□ -0.77
UBE2N-202ENST00000548946 EPS8L1Q8TE68 723 aa10.21□□□□□ -0.77
UBE2N-202ENST00000548946 KLF16Q9BXK1 252 aaPredicted RBP10.21□□□□□ -0.77
UBE2N-202ENST00000548946 CDV3Q9UKY7 258 aaKnown RBP10.21□□□□□ -0.77
UBE2N-202ENST00000548946 ZIC2O95409 532 aaPredicted RBP10.2□□□□□ -0.78
UBE2N-202ENST00000548946 NR3C2P08235 984 aa10.2□□□□□ -0.78
UBE2N-202ENST00000548946 SNRPBP14678 240 aaKnown RBP10.2□□□□□ -0.78
UBE2N-202ENST00000548946 FSHRP23945 695 aa10.2□□□□□ -0.78
UBE2N-202ENST00000548946 TRIM46Q7Z4K8 759 aa10.2□□□□□ -0.78
UBE2N-202ENST00000548946 SLC10A4Q96EP9 437 aa10.2□□□□□ -0.78
UBE2N-202ENST00000548946 SCARF1Q14162 830 aa10.19□□□□□ -0.78
UBE2N-202ENST00000548946 MRPL14Q6P1L8 145 aaKnown RBP10.18□□□□□ -0.78
UBE2N-202ENST00000548946 ITPKCQ96DU7 683 aa10.18□□□□□ -0.78
UBE2N-202ENST00000548946 CCDC116Q8IYX3 515 aa10.17□□□□□ -0.78
UBE2N-202ENST00000548946 ADAM32Q8TC27 787 aa10.17□□□□□ -0.78
UBE2N-202ENST00000548946 ZFAND3Q9H8U3 227 aa10.17□□□□□ -0.78
UBE2N-202ENST00000548946 EMILIN1Q9Y6C2 1016 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms