RNA–Protein interactions for RNA: ENST00000548882.5

MMP19-207, Transcript of matrix metallopeptidase 19, humanhuman

TSL 2

Gene MMP19, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-207ENST00000548882 ISY1Q9ULR0 285 aaKnown RBP11.34□□□□□ -0.59
MMP19-207ENST00000548882 PLA2R1Q13018 1463 aa11.34□□□□□ -0.59
MMP19-207ENST00000548882 NSD2O96028 1365 aa11.34□□□□□ -0.59
MMP19-207ENST00000548882 NOL8Q76FK4 1167 aaKnown RBP11.34□□□□□ -0.59
MMP19-207ENST00000548882 AMPHP49418 695 aa11.33□□□□□ -0.6
MMP19-207ENST00000548882 HDAC1Q13547 482 aaPredicted RBP11.33□□□□□ -0.6
MMP19-207ENST00000548882 IDI1Q13907 227 aa11.33□□□□□ -0.6
MMP19-207ENST00000548882 HSP90AA2PQ14568 343 aaPredicted RBP11.33□□□□□ -0.6
MMP19-207ENST00000548882 NFE2L2Q16236 605 aa11.33□□□□□ -0.6
MMP19-207ENST00000548882 RILPL2Q969X0 211 aa11.33□□□□□ -0.6
MMP19-207ENST00000548882 MCTP1Q6DN14 999 aa11.33□□□□□ -0.6
MMP19-207ENST00000548882 GRPEL1Q9HAV7 217 aa11.33□□□□□ -0.6
MMP19-207ENST00000548882 ABCA8O94911 1581 aa11.33□□□□□ -0.6
MMP19-207ENST00000548882 RTEL1-TNFRSF6BF6WH68 1400 aa11.32□□□□□ -0.6
MMP19-207ENST00000548882 K7ELQ4 463 aaPredicted RBP11.32□□□□□ -0.6
MMP19-207ENST00000548882 THUMPD2Q9BTF0 503 aaKnown RBP11.32□□□□□ -0.6
MMP19-207ENST00000548882 KDM5DQ9BY66 1539 aa11.32□□□□□ -0.6
MMP19-207ENST00000548882 NGDNQ8NEJ9 315 aaKnown RBP11.32□□□□□ -0.6
MMP19-207ENST00000548882 RABEP1Q15276 862 aa11.32□□□□□ -0.6
MMP19-207ENST00000548882 IL16Q14005 1332 aa11.31□□□□□ -0.6
MMP19-207ENST00000548882 PUS7Q96PZ0 661 aaKnown RBP11.31□□□□□ -0.6
MMP19-207ENST00000548882 WDR7Q9Y4E6 1490 aa11.3□□□□□ -0.6
MMP19-207ENST00000548882 NASPP49321 788 aaPredicted RBP11.3□□□□□ -0.6
MMP19-207ENST00000548882 ANKRD36BQ8N2N9 1353 aa11.3□□□□□ -0.6
MMP19-207ENST00000548882 CHMP4AQ9BY43 222 aa11.3□□□□□ -0.6
MMP19-207ENST00000548882 FYB1O15117 783 aa11.29□□□□□ -0.6
MMP19-207ENST00000548882 MAST1Q9Y2H9 1570 aa11.29□□□□□ -0.6
MMP19-207ENST00000548882 GOLGA6L4A6NEF3 574 aa11.29□□□□□ -0.6
MMP19-207ENST00000548882 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.29□□□□□ -0.6
MMP19-207ENST00000548882 BMP2KLQ5H9B9 411 aa11.29□□□□□ -0.6
MMP19-207ENST00000548882 TSPYL4Q9UJ04 414 aa11.29□□□□□ -0.6
MMP19-207ENST00000548882 KIAA2012Q0VF49 1180 aa11.28□□□□□ -0.6
MMP19-207ENST00000548882 ANO2Q9NQ90 1003 aa11.28□□□□□ -0.6
MMP19-207ENST00000548882 SAMD9LQ8IVG5 1584 aa11.28□□□□□ -0.6
MMP19-207ENST00000548882 FOXD4L6Q3SYB3 417 aaPredicted RBP11.28□□□□□ -0.6
MMP19-207ENST00000548882 SULT6B1Q6IMI4 303 aa11.28□□□□□ -0.6
MMP19-207ENST00000548882 FOXD4L3Q6VB84 417 aaPredicted RBP11.28□□□□□ -0.6
MMP19-207ENST00000548882 NUCB1Q02818 461 aa11.28□□□□□ -0.6
MMP19-207ENST00000548882 FKBP5Q13451 457 aaPredicted RBP11.28□□□□□ -0.6
MMP19-207ENST00000548882 LMOD2Q6P5Q4 547 aa11.28□□□□□ -0.6
MMP19-207ENST00000548882 CD109Q6YHK3 1445 aa11.28□□□□□ -0.6
MMP19-207ENST00000548882 SMC5Q8IY18 1101 aa11.28□□□□□ -0.6
MMP19-207ENST00000548882 LTV1Q96GA3 475 aaPredicted RBP11.27□□□□□ -0.6
MMP19-207ENST00000548882 ABCC2Q92887 1545 aa11.27□□□□□ -0.6
MMP19-207ENST00000548882 PRDM15P57071 1507 aaPredicted RBP11.27□□□□□ -0.61
MMP19-207ENST00000548882 ESPNB1AK53 854 aa11.27□□□□□ -0.61
MMP19-207ENST00000548882 PHF14O94880 888 aa11.27□□□□□ -0.61
MMP19-207ENST00000548882 CAVIN1Q6NZI2 390 aaKnown RBP11.27□□□□□ -0.61
MMP19-207ENST00000548882 TXNDC2Q86VQ3 553 aa11.27□□□□□ -0.61
MMP19-207ENST00000548882 TNPO1Q92973 898 aaKnown RBP11.27□□□□□ -0.61
MMP19-207ENST00000548882 IFT57Q9NWB7 429 aa11.27□□□□□ -0.61
MMP19-207ENST00000548882 WAPLQ7Z5K2 1190 aa11.27□□□□□ -0.61
MMP19-207ENST00000548882 RRS1Q15050 365 aaKnown RBP11.26□□□□□ -0.61
MMP19-207ENST00000548882 RPAP2Q8IXW5 612 aaPredicted RBP11.26□□□□□ -0.61
MMP19-207ENST00000548882 NECTIN2Q92692 538 aa11.26□□□□□ -0.61
MMP19-207ENST00000548882 ZBTB40Q9NUA8 1239 aa11.26□□□□□ -0.61
MMP19-207ENST00000548882 SLC4A2P04920 1241 aa11.26□□□□□ -0.61
MMP19-207ENST00000548882 NEK4P51957 841 aa11.26□□□□□ -0.61
MMP19-207ENST00000548882 EID1Q9Y6B2 187 aa11.26□□□□□ -0.61
MMP19-207ENST00000548882 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.26□□□□□ -0.61
MMP19-207ENST00000548882 FGD1P98174 961 aa11.26□□□□□ -0.61
MMP19-207ENST00000548882 ZNF692Q9BU19 519 aaPredicted RBP11.26□□□□□ -0.61
MMP19-207ENST00000548882 CWC22Q9HCG8 908 aaKnown RBP11.26□□□□□ -0.61
MMP19-207ENST00000548882 XRCC6P12956 609 aaKnown RBP eCLIP11.25□□□□□ -0.61
MMP19-207ENST00000548882 PRPF40AO75400 957 aaKnown RBP11.25□□□□□ -0.61
MMP19-207ENST00000548882 CCDC61Q9Y6R9 512 aa11.25□□□□□ -0.61
MMP19-207ENST00000548882 PTPRTO14522 1441 aa11.25□□□□□ -0.61
MMP19-207ENST00000548882 TBC1D9Q6ZT07 1266 aa11.25□□□□□ -0.61
MMP19-207ENST00000548882 EMILIN1Q9Y6C2 1016 aa11.25□□□□□ -0.61
MMP19-207ENST00000548882 ADCY10Q96PN6 1610 aa11.24□□□□□ -0.61
MMP19-207ENST00000548882 FBLN1P23142 703 aa11.24□□□□□ -0.61
MMP19-207ENST00000548882 CCDC173Q0VFZ6 552 aa11.24□□□□□ -0.61
MMP19-207ENST00000548882 DCTN1Q14203 1278 aa11.24□□□□□ -0.61
MMP19-207ENST00000548882 NCBP3Q53F19 620 aaKnown RBP11.24□□□□□ -0.61
MMP19-207ENST00000548882 ARHGAP45Q92619 1136 aa11.24□□□□□ -0.61
MMP19-207ENST00000548882 ATP10AO60312 1499 aa11.24□□□□□ -0.61
MMP19-207ENST00000548882 HDAC5Q9UQL6 1122 aa11.24□□□□□ -0.61
MMP19-207ENST00000548882 CDC42BPAQ5VT25 1732 aa11.24□□□□□ -0.61
MMP19-207ENST00000548882 ERC2O15083 957 aa11.24□□□□□ -0.61
MMP19-207ENST00000548882 FAM69CQ0P6D2 419 aa11.24□□□□□ -0.61
MMP19-207ENST00000548882 GNAI3P08754 354 aa11.23□□□□□ -0.61
MMP19-207ENST00000548882 CHAF1AQ13111 956 aaPredicted RBP11.23□□□□□ -0.61
MMP19-207ENST00000548882 MCM2P49736 904 aa11.23□□□□□ -0.61
MMP19-207ENST00000548882 SBNO2Q9Y2G9 1366 aa11.23□□□□□ -0.61
MMP19-207ENST00000548882 NME9Q86XW9 330 aa11.23□□□□□ -0.61
MMP19-207ENST00000548882 SNX21Q969T3 373 aa11.23□□□□□ -0.61
MMP19-207ENST00000548882 GPATCH3Q96I76 525 aa11.23□□□□□ -0.61
MMP19-207ENST00000548882 CSPP1Q1MSJ5 1256 aa11.22□□□□□ -0.61
MMP19-207ENST00000548882 NUDT16Q96DE0 195 aaKnown RBP11.22□□□□□ -0.61
MMP19-207ENST00000548882 GNAI2P04899 355 aa11.22□□□□□ -0.61
MMP19-207ENST00000548882 FBXO31Q5XUX0 539 aaPredicted RBP11.22□□□□□ -0.61
MMP19-207ENST00000548882 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.22□□□□□ -0.61
MMP19-207ENST00000548882 MBIPQ9NS73 344 aa11.22□□□□□ -0.61
MMP19-207ENST00000548882 ATP6V1DQ9Y5K8 247 aa11.22□□□□□ -0.61
MMP19-207ENST00000548882 TRPM1Q7Z4N2 1603 aa11.22□□□□□ -0.61
MMP19-207ENST00000548882 SSFA2P28290 1259 aa11.22□□□□□ -0.61
MMP19-207ENST00000548882 ZRSR1Q15695 479 aaKnown RBP11.22□□□□□ -0.61
MMP19-207ENST00000548882 TRIM35Q9UPQ4 493 aa11.22□□□□□ -0.61
MMP19-207ENST00000548882 MBD3O95983 291 aa11.21□□□□□ -0.61
MMP19-207ENST00000548882 EIF2S2P20042 333 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms