RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 WNT7BP56706 349 aa10.28□□□□□ -0.76
CCDC38-206ENST00000548771 KIFC2Q96AC6 838 aa10.28□□□□□ -0.76
CCDC38-206ENST00000548771 CFAP99D6REC4 459 aa10.27□□□□□ -0.77
CCDC38-206ENST00000548771 CCNYL3P0C7X3 344 aa10.27□□□□□ -0.77
CCDC38-206ENST00000548771 LORP23490 312 aaPredicted RBP10.27□□□□□ -0.77
CCDC38-206ENST00000548771 TRIM46Q7Z4K8 759 aa10.27□□□□□ -0.77
CCDC38-206ENST00000548771 LYPD8Q6UX82 237 aa10.26□□□□□ -0.77
CCDC38-206ENST00000548771 ZBTB3Q9H5J0 574 aa10.26□□□□□ -0.77
CCDC38-206ENST00000548771 LILRB3O75022 631 aa10.25□□□□□ -0.77
CCDC38-206ENST00000548771 NXF1Q9UBU9 619 aaKnown RBP10.25□□□□□ -0.77
CCDC38-206ENST00000548771 SIAH2O43255 324 aa10.24□□□□□ -0.77
CCDC38-206ENST00000548771 KCNH2Q12809 1159 aa10.24□□□□□ -0.77
CCDC38-206ENST00000548771 CABLES1Q8TDN4 633 aa10.24□□□□□ -0.77
CCDC38-206ENST00000548771 QPCTQ16769 361 aa10.23□□□□□ -0.77
CCDC38-206ENST00000548771 SLC16A10Q8TF71 515 aa10.22□□□□□ -0.77
CCDC38-206ENST00000548771 F12P00748 615 aaPredicted RBP10.21□□□□□ -0.77
CCDC38-206ENST00000548771 EHBP1Q8NDI1 1231 aa10.21□□□□□ -0.77
CCDC38-206ENST00000548771 RSPH6AQ9H0K4 717 aa10.21□□□□□ -0.77
CCDC38-206ENST00000548771 UNC93B1Q9H1C4 597 aa10.21□□□□□ -0.77
CCDC38-206ENST00000548771 KDM4CQ9H3R0 1056 aa10.21□□□□□ -0.77
CCDC38-206ENST00000548771 GPBP1L1Q9HC44 474 aaPredicted RBP10.21□□□□□ -0.77
CCDC38-206ENST00000548771 ERBB4Q15303 1308 aa10.21□□□□□ -0.78
CCDC38-206ENST00000548771 CAPN5O15484 640 aaPredicted RBP10.2□□□□□ -0.78
CCDC38-206ENST00000548771 SH3BP2P78314 561 aa10.2□□□□□ -0.78
CCDC38-206ENST00000548771 CLK2P49760 499 aaKnown RBP10.19□□□□□ -0.78
CCDC38-206ENST00000548771 PER1O15534 1290 aaPredicted RBP10.18□□□□□ -0.78
CCDC38-206ENST00000548771 CSPP1Q1MSJ5 1256 aa10.18□□□□□ -0.78
CCDC38-206ENST00000548771 RTL5Q5HYW3 569 aaPredicted RBP10.18□□□□□ -0.78
CCDC38-206ENST00000548771 ZSCAN1Q8NBB4 408 aa10.18□□□□□ -0.78
CCDC38-206ENST00000548771 FAM117AQ9C073 453 aa10.18□□□□□ -0.78
CCDC38-206ENST00000548771 WASF2Q9Y6W5 498 aa10.18□□□□□ -0.78
CCDC38-206ENST00000548771 PLEKHG3A1L390 1219 aa10.17□□□□□ -0.78
CCDC38-206ENST00000548771 BAP1Q92560 729 aa10.17□□□□□ -0.78
CCDC38-206ENST00000548771 SKIV2LQ15477 1246 aaKnown RBP10.16□□□□□ -0.78
CCDC38-206ENST00000548771 FBXO31Q5XUX0 539 aaPredicted RBP10.16□□□□□ -0.78
CCDC38-206ENST00000548771 IRF7Q92985 503 aa10.16□□□□□ -0.78
CCDC38-206ENST00000548771 ZFP42Q96MM3 310 aa10.16□□□□□ -0.78
CCDC38-206ENST00000548771 POLR3EQ9NVU0 708 aa10.16□□□□□ -0.78
CCDC38-206ENST00000548771 H3BM21 787 aa10.15□□□□□ -0.78
CCDC38-206ENST00000548771 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.15□□□□□ -0.78
CCDC38-206ENST00000548771 LINC01559Q495D7 138 aa10.14□□□□□ -0.79
CCDC38-206ENST00000548771 SH3D19Q5HYK7 790 aa10.14□□□□□ -0.79
CCDC38-206ENST00000548771 ZNF511Q8NB15 262 aa10.14□□□□□ -0.79
CCDC38-206ENST00000548771 DDRGK1Q96HY6 314 aa10.14□□□□□ -0.79
CCDC38-206ENST00000548771 MAP10Q9P2G4 905 aa10.14□□□□□ -0.79
CCDC38-206ENST00000548771 TLL2Q9Y6L7 1015 aa10.14□□□□□ -0.79
CCDC38-206ENST00000548771 FAM181BA6NEQ2 426 aa10.13□□□□□ -0.79
CCDC38-206ENST00000548771 NUTM2BA6NNL0 878 aaPredicted RBP10.13□□□□□ -0.79
CCDC38-206ENST00000548771 SOBPA7XYQ1 873 aa10.13□□□□□ -0.79
CCDC38-206ENST00000548771 NUTM2EB1AL46 878 aaPredicted RBP10.13□□□□□ -0.79
CCDC38-206ENST00000548771 NUTM2DQ5VT03 806 aaPredicted RBP10.13□□□□□ -0.79
CCDC38-206ENST00000548771 NUTM2AQ8IVF1 878 aaPredicted RBP10.13□□□□□ -0.79
CCDC38-206ENST00000548771 MPNDQ8N594 471 aa10.13□□□□□ -0.79
CCDC38-206ENST00000548771 CTHP32929 405 aa10.11□□□□□ -0.79
CCDC38-206ENST00000548771 PPP2R2DQ66LE6 453 aa10.11□□□□□ -0.79
CCDC38-206ENST00000548771 PROCA1Q8NCQ7 364 aaPredicted RBP10.11□□□□□ -0.79
CCDC38-206ENST00000548771 LOC100996750A0A140TA64 210 aa10.1□□□□□ -0.79
CCDC38-206ENST00000548771 VARSP26640 1264 aaKnown RBP10.1□□□□□ -0.79
CCDC38-206ENST00000548771 NPAS3Q8IXF0 933 aa10.1□□□□□ -0.79
CCDC38-206ENST00000548771 KRTAP4-6Q9BYQ5 205 aa10.1□□□□□ -0.79
CCDC38-206ENST00000548771 CTDSPL2Q05D32 466 aa10.07□□□□□ -0.8
CCDC38-206ENST00000548771 HELBQ8NG08 1087 aaPredicted RBP10.07□□□□□ -0.8
CCDC38-206ENST00000548771 FOXJ1Q92949 421 aa10.07□□□□□ -0.8
CCDC38-206ENST00000548771 PURBQ96QR8 312 aaKnown RBP10.07□□□□□ -0.8
CCDC38-206ENST00000548771 NNTQ13423 1086 aa10.06□□□□□ -0.8
CCDC38-206ENST00000548771 C4orf48Q5BLP8 95 aa10.06□□□□□ -0.8
CCDC38-206ENST00000548771 TSC1Q92574 1164 aa10.06□□□□□ -0.8
CCDC38-206ENST00000548771 MRPL14Q6P1L8 145 aaKnown RBP10.05□□□□□ -0.8
CCDC38-206ENST00000548771 SH3RF1Q7Z6J0 888 aa10.05□□□□□ -0.8
CCDC38-206ENST00000548771 CDK15Q96Q40 435 aa10.05□□□□□ -0.8
CCDC38-206ENST00000548771 GOPCQ9HD26 462 aa10.05□□□□□ -0.8
CCDC38-206ENST00000548771 TIMP2P16035 220 aa10.03□□□□□ -0.8
CCDC38-206ENST00000548771 WDR4P57081 412 aaKnown RBP10.02□□□□□ -0.81
CCDC38-206ENST00000548771 ARMC2Q8NEN0 867 aa10.02□□□□□ -0.81
CCDC38-206ENST00000548771 BRPF1P55201 1214 aaPredicted RBP10.01□□□□□ -0.81
CCDC38-206ENST00000548771 SH3BP5LQ7L8J4 393 aa10.01□□□□□ -0.81
CCDC38-206ENST00000548771 LRRN4Q8WUT4 740 aa10.01□□□□□ -0.81
CCDC38-206ENST00000548771 C1QTNF2Q9BXJ5 285 aa10.01□□□□□ -0.81
CCDC38-206ENST00000548771 FAM174AQ8TBP5 190 aa10□□□□□ -0.81
CCDC38-206ENST00000548771 KLF16Q9BXK1 252 aaPredicted RBP10□□□□□ -0.81
CCDC38-206ENST00000548771 SCARF1Q14162 830 aa9.99□□□□□ -0.81
CCDC38-206ENST00000548771 BPHLQ86WA6 291 aaPredicted RBP9.99□□□□□ -0.81
CCDC38-206ENST00000548771 GPKOWQ92917 476 aaPredicted RBP eCLIP9.99□□□□□ -0.81
CCDC38-206ENST00000548771 GRM5P41594 1212 aa9.98□□□□□ -0.81
CCDC38-206ENST00000548771 NEUROD2Q15784 382 aa9.98□□□□□ -0.81
CCDC38-206ENST00000548771 ZFAND3Q9H8U3 227 aa9.98□□□□□ -0.81
CCDC38-206ENST00000548771 ADH1CP00326 375 aa9.97□□□□□ -0.81
CCDC38-206ENST00000548771 C6orf118Q5T5N4 469 aa9.97□□□□□ -0.81
CCDC38-206ENST00000548771 NBPF14Q5TI25 921 aa9.97□□□□□ -0.81
CCDC38-206ENST00000548771 VSIG8P0DPA2 414 aa9.96□□□□□ -0.82
CCDC38-206ENST00000548771 RFC5P40937 340 aa9.96□□□□□ -0.82
CCDC38-206ENST00000548771 SUZ12Q15022 739 aaKnown RBP9.96□□□□□ -0.82
CCDC38-206ENST00000548771 TRMT44Q8IYL2 757 aaKnown RBP9.96□□□□□ -0.82
CCDC38-206ENST00000548771 ARID5BQ14865 1188 aa9.95□□□□□ -0.82
CCDC38-206ENST00000548771 NR6A1Q15406 480 aa9.95□□□□□ -0.82
CCDC38-206ENST00000548771 PDXDC2PQ6P474 469 aa9.95□□□□□ -0.82
CCDC38-206ENST00000548771 IL27Q8NEV9 243 aa9.95□□□□□ -0.82
CCDC38-206ENST00000548771 ZIC2O95409 532 aaPredicted RBP9.94□□□□□ -0.82
CCDC38-206ENST00000548771 GSK3AP49840 483 aa9.94□□□□□ -0.82
CCDC38-206ENST00000548771 TPRNQ4KMQ1 711 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms