RNA–Protein interactions for RNA: ENST00000548640.5

TMEM106C-209, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-209ENST00000548640 WWC1Q8IX03 1113 aa18.27■□□□□ 0.52
TMEM106C-209ENST00000548640 PIK3R4Q99570 1358 aa18.27■□□□□ 0.51
TMEM106C-209ENST00000548640 MAPK8IP3Q9UPT6 1336 aa18.26■□□□□ 0.51
TMEM106C-209ENST00000548640 CEP170BQ9Y4F5 1589 aaPredicted RBP18.26■□□□□ 0.51
TMEM106C-209ENST00000548640 AKAP12Q02952 1782 aa18.26■□□□□ 0.51
TMEM106C-209ENST00000548640 PNPLA6Q8IY17 1366 aa18.26■□□□□ 0.51
TMEM106C-209ENST00000548640 U2SURPO15042 1029 aaKnown RBP18.25■□□□□ 0.51
TMEM106C-209ENST00000548640 NEFMP07197 916 aa18.25■□□□□ 0.51
TMEM106C-209ENST00000548640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.25■□□□□ 0.51
TMEM106C-209ENST00000548640 EXOC6Q8TAG9 804 aa18.25■□□□□ 0.51
TMEM106C-209ENST00000548640 COG3Q96JB2 828 aa18.24■□□□□ 0.51
TMEM106C-209ENST00000548640 PHF23Q9BUL5 403 aaPredicted RBP18.24■□□□□ 0.51
TMEM106C-209ENST00000548640 MYH16Q9H6N6 1097 aa18.24■□□□□ 0.51
TMEM106C-209ENST00000548640 AATKQ6ZMQ8 1374 aa18.24■□□□□ 0.51
TMEM106C-209ENST00000548640 RIMS1Q86UR5 1692 aaKnown RBP18.24■□□□□ 0.51
TMEM106C-209ENST00000548640 TOPAZ1Q8N9V7 1692 aa18.23■□□□□ 0.51
TMEM106C-209ENST00000548640 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
TMEM106C-209ENST00000548640 SLC26A8Q96RN1 970 aa18.22■□□□□ 0.51
TMEM106C-209ENST00000548640 AMOTL2Q9Y2J4 779 aa18.22■□□□□ 0.51
TMEM106C-209ENST00000548640 PTPRUQ92729 1446 aa18.22■□□□□ 0.51
TMEM106C-209ENST00000548640 CDK12Q9NYV4 1490 aaPredicted RBP18.21■□□□□ 0.51
TMEM106C-209ENST00000548640 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.21■□□□□ 0.51
TMEM106C-209ENST00000548640 PLEKHG3A1L390 1219 aa18.21■□□□□ 0.51
TMEM106C-209ENST00000548640 ZNF142P52746 1687 aaPredicted RBP18.2■□□□□ 0.5
TMEM106C-209ENST00000548640 FCHSD2O94868 740 aa18.19■□□□□ 0.5
TMEM106C-209ENST00000548640 NEUROD2Q15784 382 aa18.19■□□□□ 0.5
TMEM106C-209ENST00000548640 XRN1Q8IZH2 1706 aaKnown RBP18.19■□□□□ 0.5
TMEM106C-209ENST00000548640 CRBNQ96SW2 442 aa18.19■□□□□ 0.5
TMEM106C-209ENST00000548640 PRR36Q9H6K5 1346 aa18.19■□□□□ 0.5
TMEM106C-209ENST00000548640 CT47B1P0C2W7 299 aaPredicted RBP18.18■□□□□ 0.5
TMEM106C-209ENST00000548640 POLKQ9UBT6 870 aa18.18■□□□□ 0.5
TMEM106C-209ENST00000548640 RRP7AQ9Y3A4 280 aaKnown RBP18.18■□□□□ 0.5
TMEM106C-209ENST00000548640 IL16Q14005 1332 aa18.18■□□□□ 0.5
TMEM106C-209ENST00000548640 PLIN1O60240 522 aa18.17■□□□□ 0.5
TMEM106C-209ENST00000548640 NME9Q86XW9 330 aa18.17■□□□□ 0.5
TMEM106C-209ENST00000548640 RBM19Q9Y4C8 960 aaKnown RBP18.17■□□□□ 0.5
TMEM106C-209ENST00000548640 ADAMTSL3P82987 1691 aa18.17■□□□□ 0.5
TMEM106C-209ENST00000548640 ANKARQ7Z5J8 1434 aa18.16■□□□□ 0.5
TMEM106C-209ENST00000548640 ANKLE2Q86XL3 938 aa18.16■□□□□ 0.5
TMEM106C-209ENST00000548640 PLEKHF1Q96S99 279 aa18.16■□□□□ 0.5
TMEM106C-209ENST00000548640 SPINK5Q9NQ38 1064 aaPredicted RBP18.16■□□□□ 0.5
TMEM106C-209ENST00000548640 TTC21AQ8NDW8 1320 aa18.16■□□□□ 0.5
TMEM106C-209ENST00000548640 NRKQ7Z2Y5 1582 aa18.16■□□□□ 0.5
TMEM106C-209ENST00000548640 TMPOP42166 694 aaKnown RBP18.15■□□□□ 0.5
TMEM106C-209ENST00000548640 TTC21BQ7Z4L5 1316 aa18.15■□□□□ 0.5
TMEM106C-209ENST00000548640 USP6P35125 1406 aa18.15■□□□□ 0.5
TMEM106C-209ENST00000548640 CANXP27824 592 aaKnown RBP18.14■□□□□ 0.49
TMEM106C-209ENST00000548640 ACEP12821 1306 aa18.14■□□□□ 0.49
TMEM106C-209ENST00000548640 PPM1GO15355 546 aaPredicted RBP18.13■□□□□ 0.49
TMEM106C-209ENST00000548640 CALD1Q05682 793 aaKnown RBP18.13■□□□□ 0.49
TMEM106C-209ENST00000548640 PDE3AQ14432 1141 aa18.13■□□□□ 0.49
TMEM106C-209ENST00000548640 DMRT2Q9Y5R5 561 aa18.12■□□□□ 0.49
TMEM106C-209ENST00000548640 AAMPQ13685 434 aa18.11■□□□□ 0.49
TMEM106C-209ENST00000548640 LRRC7Q96NW7 1537 aa18.11■□□□□ 0.49
TMEM106C-209ENST00000548640 MAP2P11137 1827 aaKnown RBP18.11■□□□□ 0.49
TMEM106C-209ENST00000548640 OVOS2A0A0J9YW53 1432 aa18.1■□□□□ 0.49
TMEM106C-209ENST00000548640 OVOS2Q6IE36 1432 aa18.1■□□□□ 0.49
TMEM106C-209ENST00000548640 TCERG1O14776 1098 aaKnown RBP18.1■□□□□ 0.49
TMEM106C-209ENST00000548640 MS4A1P11836 297 aa18.1■□□□□ 0.49
TMEM106C-209ENST00000548640 LMOD3Q0VAK6 560 aa18.1■□□□□ 0.49
TMEM106C-209ENST00000548640 NCKAP5LQ9HCH0 1330 aa18.09■□□□□ 0.49
TMEM106C-209ENST00000548640 RIPK4P57078 832 aa18.09■□□□□ 0.49
TMEM106C-209ENST00000548640 RSPH6AQ9H0K4 717 aa18.09■□□□□ 0.49
TMEM106C-209ENST00000548640 EMILIN1Q9Y6C2 1016 aa18.09■□□□□ 0.49
TMEM106C-209ENST00000548640 PRKAR2BP31323 418 aa18.08■□□□□ 0.48
TMEM106C-209ENST00000548640 IL13P35225 146 aa18.08■□□□□ 0.48
TMEM106C-209ENST00000548640 CENPQQ7L2Z9 268 aaPredicted RBP18.08■□□□□ 0.48
TMEM106C-209ENST00000548640 NGDNQ8NEJ9 315 aaKnown RBP18.08■□□□□ 0.48
TMEM106C-209ENST00000548640 SETD1BQ9UPS6 1966 aaKnown RBP18.08■□□□□ 0.48
TMEM106C-209ENST00000548640 RARSP54136 660 aaKnown RBP18.07■□□□□ 0.48
TMEM106C-209ENST00000548640 NFE2L2Q16236 605 aa18.07■□□□□ 0.48
TMEM106C-209ENST00000548640 C20orf194Q5TEA3 1177 aa18.07■□□□□ 0.48
TMEM106C-209ENST00000548640 SSH2Q76I76 1423 aa18.06■□□□□ 0.48
TMEM106C-209ENST00000548640 NALCNQ8IZF0 1738 aa18.06■□□□□ 0.48
TMEM106C-209ENST00000548640 FMN2Q9NZ56 1722 aa18.06■□□□□ 0.48
TMEM106C-209ENST00000548640 USP31Q70CQ4 1352 aa18.06■□□□□ 0.48
TMEM106C-209ENST00000548640 FANCIQ9NVI1 1328 aa18.06■□□□□ 0.48
TMEM106C-209ENST00000548640 BCAR3O75815 825 aa18.06■□□□□ 0.48
TMEM106C-209ENST00000548640 TRIM35Q9UPQ4 493 aa18.06■□□□□ 0.48
TMEM106C-209ENST00000548640 KCNA6P17658 529 aa18.05■□□□□ 0.48
TMEM106C-209ENST00000548640 DNAJC5Q9H3Z4 198 aa18.05■□□□□ 0.48
TMEM106C-209ENST00000548640 ZRANB1Q9UGI0 708 aa18.05■□□□□ 0.48
TMEM106C-209ENST00000548640 CHD2O14647 1828 aaKnown RBP18.03■□□□□ 0.48
TMEM106C-209ENST00000548640 NUTM2FA1L443 756 aa18.03■□□□□ 0.48
TMEM106C-209ENST00000548640 NPHP4O75161 1426 aaPredicted RBP18.03■□□□□ 0.48
TMEM106C-209ENST00000548640 RRS1Q15050 365 aaKnown RBP18.02■□□□□ 0.48
TMEM106C-209ENST00000548640 ZNF428Q96B54 188 aa18.02■□□□□ 0.48
TMEM106C-209ENST00000548640 HMOX1P09601 288 aa18■□□□□ 0.47
TMEM106C-209ENST00000548640 GNAI1P63096 354 aa18■□□□□ 0.47
TMEM106C-209ENST00000548640 PMFBP1Q8TBY8 1022 aa18■□□□□ 0.47
TMEM106C-209ENST00000548640 FRAT1Q92837 279 aaPredicted RBP18■□□□□ 0.47
TMEM106C-209ENST00000548640 KIF24Q5T7B8 1368 aa18■□□□□ 0.47
TMEM106C-209ENST00000548640 KDM2BQ8NHM5 1336 aa17.99■□□□□ 0.47
TMEM106C-209ENST00000548640 EXOSC9Q06265 439 aaKnown RBP17.99■□□□□ 0.47
TMEM106C-209ENST00000548640 ZKSCAN2Q63HK3 967 aa17.99■□□□□ 0.47
TMEM106C-209ENST00000548640 SBNO1A3KN83 1393 aa17.99■□□□□ 0.47
TMEM106C-209ENST00000548640 ADGRL3Q9HAR2 1447 aa17.98■□□□□ 0.47
TMEM106C-209ENST00000548640 FBLN1P23142 703 aa17.98■□□□□ 0.47
TMEM106C-209ENST00000548640 IFT57Q9NWB7 429 aa17.98■□□□□ 0.47
TMEM106C-209ENST00000548640 ARHGEF10O15013 1369 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 399.7 ms