RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 ZNF692Q9BU19 519 aaPredicted RBP13.57□□□□□ -0.24
USP15-208ENST00000548524 TULP4Q9NRJ4 1543 aa13.57□□□□□ -0.24
USP15-208ENST00000548524 GPRASP1Q5JY77 1395 aa13.57□□□□□ -0.24
USP15-208ENST00000548524 SBNO1A3KN83 1393 aa13.56□□□□□ -0.24
USP15-208ENST00000548524 TNS3Q68CZ2 1445 aa13.56□□□□□ -0.24
USP15-208ENST00000548524 RXRBP28702 533 aa13.55□□□□□ -0.24
USP15-208ENST00000548524 SRPK2P78362 688 aaKnown RBP13.55□□□□□ -0.24
USP15-208ENST00000548524 NBPF8Q3BBV2 869 aa13.55□□□□□ -0.24
USP15-208ENST00000548524 PCGF6Q9BYE7 350 aa13.55□□□□□ -0.24
USP15-208ENST00000548524 ARHGEF28Q8N1W1 1705 aaKnown RBP13.54□□□□□ -0.24
USP15-208ENST00000548524 QTRT2Q9H974 415 aaKnown RBP13.54□□□□□ -0.24
USP15-208ENST00000548524 USP21Q9UK80 565 aa13.54□□□□□ -0.24
USP15-208ENST00000548524 CCDC61Q9Y6R9 512 aa13.54□□□□□ -0.24
USP15-208ENST00000548524 ARHGEF10O15013 1369 aa13.54□□□□□ -0.24
USP15-208ENST00000548524 PAK3O75914 559 aaPredicted RBP13.53□□□□□ -0.24
USP15-208ENST00000548524 CARD11Q9BXL7 1154 aa13.52□□□□□ -0.25
USP15-208ENST00000548524 CABP2Q9NPB3 220 aa13.52□□□□□ -0.25
USP15-208ENST00000548524 USP32Q8NFA0 1604 aa13.52□□□□□ -0.25
USP15-208ENST00000548524 ATP7BP35670 1465 aa13.51□□□□□ -0.25
USP15-208ENST00000548524 FNBP4Q8N3X1 1017 aaPredicted RBP13.51□□□□□ -0.25
USP15-208ENST00000548524 CABLES1Q8TDN4 633 aa13.51□□□□□ -0.25
USP15-208ENST00000548524 COL22A1Q8NFW1 1626 aaPredicted RBP13.5□□□□□ -0.25
USP15-208ENST00000548524 EVC2Q86UK5 1308 aa13.5□□□□□ -0.25
USP15-208ENST00000548524 RBM6P78332 1123 aaKnown RBP13.5□□□□□ -0.25
USP15-208ENST00000548524 TRPC5Q9UL62 973 aaPredicted RBP13.5□□□□□ -0.25
USP15-208ENST00000548524 ACEP12821 1306 aa13.49□□□□□ -0.25
USP15-208ENST00000548524 PLEKHG3A1L390 1219 aa13.49□□□□□ -0.25
USP15-208ENST00000548524 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
USP15-208ENST00000548524 TRPM1Q7Z4N2 1603 aa13.49□□□□□ -0.25
USP15-208ENST00000548524 RGPD8O14715 1765 aaPredicted RBP13.48□□□□□ -0.25
USP15-208ENST00000548524 SSUH2Q9Y2M2 353 aa13.47□□□□□ -0.25
USP15-208ENST00000548524 PPIP5K1Q6PFW1 1433 aa13.47□□□□□ -0.25
USP15-208ENST00000548524 POLR3AO14802 1390 aaPredicted RBP13.46□□□□□ -0.25
USP15-208ENST00000548524 CABP1Q9NZU7 370 aa13.46□□□□□ -0.25
USP15-208ENST00000548524 RALGAPBQ86X10 1494 aa13.46□□□□□ -0.25
USP15-208ENST00000548524 NUTM2GQ5VZR2 741 aa13.45□□□□□ -0.26
USP15-208ENST00000548524 UNC5CLQ8IV45 518 aa13.45□□□□□ -0.26
USP15-208ENST00000548524 CDK12Q9NYV4 1490 aaPredicted RBP13.44□□□□□ -0.26
USP15-208ENST00000548524 ATRNO75882 1429 aa13.44□□□□□ -0.26
USP15-208ENST00000548524 CLSPNQ9HAW4 1339 aa13.43□□□□□ -0.26
USP15-208ENST00000548524 BCL9LQ86UU0 1499 aa13.43□□□□□ -0.26
USP15-208ENST00000548524 FAM83GA6ND36 823 aa13.43□□□□□ -0.26
USP15-208ENST00000548524 ABTB2Q8N961 1025 aa13.43□□□□□ -0.26
USP15-208ENST00000548524 CCDC9Q9Y3X0 531 aaKnown RBP13.43□□□□□ -0.26
USP15-208ENST00000548524 QRICH2Q9H0J4 1663 aa13.43□□□□□ -0.26
USP15-208ENST00000548524 ITSN1Q15811 1721 aa13.42□□□□□ -0.26
USP15-208ENST00000548524 RGS12O14924 1447 aa13.42□□□□□ -0.26
USP15-208ENST00000548524 CCER1Q8TC90 406 aaPredicted RBP13.42□□□□□ -0.26
USP15-208ENST00000548524 GJD4Q96KN9 370 aaPredicted RBP13.42□□□□□ -0.26
USP15-208ENST00000548524 SLIT2O94813 1529 aa13.42□□□□□ -0.26
USP15-208ENST00000548524 ATAD2Q6PL18 1390 aa13.42□□□□□ -0.26
USP15-208ENST00000548524 PROM2Q8N271 834 aa13.41□□□□□ -0.26
USP15-208ENST00000548524 PRDM11Q9NQV5 511 aa13.41□□□□□ -0.26
USP15-208ENST00000548524 SBNO2Q9Y2G9 1366 aa13.41□□□□□ -0.26
USP15-208ENST00000548524 TRPM3Q9HCF6 1732 aaPredicted RBP13.41□□□□□ -0.26
USP15-208ENST00000548524 NLRP13Q86W25 1043 aa13.4□□□□□ -0.26
USP15-208ENST00000548524 TIMELESSQ9UNS1 1208 aa13.4□□□□□ -0.26
USP15-208ENST00000548524 BRD4O60885 1362 aaPredicted RBP13.4□□□□□ -0.26
USP15-208ENST00000548524 ZC3H6P61129 1189 aaKnown RBP13.39□□□□□ -0.27
USP15-208ENST00000548524 VPS72Q15906 364 aa13.39□□□□□ -0.27
USP15-208ENST00000548524 BTG4Q9NY30 223 aa13.39□□□□□ -0.27
USP15-208ENST00000548524 TOPAZ1Q8N9V7 1692 aa13.39□□□□□ -0.27
USP15-208ENST00000548524 ALS2Q96Q42 1657 aa13.38□□□□□ -0.27
USP15-208ENST00000548524 ST20-MTHFSA0A0A6YYL1 179 aa13.38□□□□□ -0.27
USP15-208ENST00000548524 TMC1Q8TDI8 760 aa13.38□□□□□ -0.27
USP15-208ENST00000548524 USP6P35125 1406 aa13.38□□□□□ -0.27
USP15-208ENST00000548524 KIAA0232Q92628 1395 aa13.37□□□□□ -0.27
USP15-208ENST00000548524 SLC24A1O60721 1099 aa13.37□□□□□ -0.27
USP15-208ENST00000548524 NLRP6P59044 892 aa13.37□□□□□ -0.27
USP15-208ENST00000548524 CHRNA2Q15822 529 aa13.37□□□□□ -0.27
USP15-208ENST00000548524 UPF1Q92900 1129 aaKnown RBP eCLIP13.37□□□□□ -0.27
USP15-208ENST00000548524 USP19O94966 1318 aa13.36□□□□□ -0.27
USP15-208ENST00000548524 TTC21BQ7Z4L5 1316 aa13.36□□□□□ -0.27
USP15-208ENST00000548524 MARF1Q9Y4F3 1742 aaKnown RBP13.36□□□□□ -0.27
USP15-208ENST00000548524 A0A0G2JS52 829 aa13.35□□□□□ -0.27
USP15-208ENST00000548524 ZBTB7CA1YPR0 619 aa13.35□□□□□ -0.27
USP15-208ENST00000548524 GCP02774 474 aa13.35□□□□□ -0.27
USP15-208ENST00000548524 MYT1Q01538 1121 aa13.35□□□□□ -0.27
USP15-208ENST00000548524 HDGFL2Q7Z4V5 671 aaPredicted RBP13.35□□□□□ -0.27
USP15-208ENST00000548524 KTN1Q86UP2 1357 aaKnown RBP13.34□□□□□ -0.27
USP15-208ENST00000548524 USP47Q96K76 1375 aa13.34□□□□□ -0.27
USP15-208ENST00000548524 EVA1CP58658 441 aa13.34□□□□□ -0.27
USP15-208ENST00000548524 SEPT12Q8IYM1 358 aa13.34□□□□□ -0.27
USP15-208ENST00000548524 AKT1S1Q96B36 256 aa13.34□□□□□ -0.27
USP15-208ENST00000548524 PUS7Q96PZ0 661 aaKnown RBP13.34□□□□□ -0.27
USP15-208ENST00000548524 TESK2Q96S53 571 aa13.34□□□□□ -0.27
USP15-208ENST00000548524 SLC12A5Q9H2X9 1139 aa13.34□□□□□ -0.27
USP15-208ENST00000548524 STRN4Q9NRL3 753 aa13.34□□□□□ -0.27
USP15-208ENST00000548524 ABCA3Q99758 1704 aa13.33□□□□□ -0.27
USP15-208ENST00000548524 TERF2IPQ9NYB0 399 aa13.33□□□□□ -0.28
USP15-208ENST00000548524 TTC21AQ8NDW8 1320 aa13.33□□□□□ -0.28
USP15-208ENST00000548524 CPSF1Q10570 1443 aaKnown RBP13.32□□□□□ -0.28
USP15-208ENST00000548524 SSH2Q76I76 1423 aa13.32□□□□□ -0.28
USP15-208ENST00000548524 TMF1P82094 1093 aa13.32□□□□□ -0.28
USP15-208ENST00000548524 FAM98CQ17RN3 349 aaKnown RBP13.32□□□□□ -0.28
USP15-208ENST00000548524 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.32□□□□□ -0.28
USP15-208ENST00000548524 CPDO75976 1380 aa13.32□□□□□ -0.28
USP15-208ENST00000548524 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.31□□□□□ -0.28
USP15-208ENST00000548524 COL14A1Q05707 1796 aaKnown RBP13.31□□□□□ -0.28
USP15-208ENST00000548524 SOX12O15370 315 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms