RNA–Protein interactions for RNA: ENST00000548355.5

TMEM106C-208, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-208ENST00000548355 SALL2Q9Y467 1007 aaPredicted RBP10.37□□□□□ -0.75
TMEM106C-208ENST00000548355 TTC21BQ7Z4L5 1316 aa10.36□□□□□ -0.75
TMEM106C-208ENST00000548355 NALCNQ8IZF0 1738 aa10.36□□□□□ -0.75
TMEM106C-208ENST00000548355 HSPA2P54652 639 aa10.36□□□□□ -0.75
TMEM106C-208ENST00000548355 PROSER2Q86WR7 435 aaPredicted RBP10.36□□□□□ -0.75
TMEM106C-208ENST00000548355 NUDCQ9Y266 331 aa10.36□□□□□ -0.75
TMEM106C-208ENST00000548355 NRKQ7Z2Y5 1582 aa10.35□□□□□ -0.75
TMEM106C-208ENST00000548355 CCDC146Q8IYE0 955 aa10.35□□□□□ -0.75
TMEM106C-208ENST00000548355 RBM33Q96EV2 1170 aaKnown RBP10.35□□□□□ -0.75
TMEM106C-208ENST00000548355 SHPRHQ149N8 1683 aa10.34□□□□□ -0.75
TMEM106C-208ENST00000548355 TTC21AQ8NDW8 1320 aa10.34□□□□□ -0.75
TMEM106C-208ENST00000548355 NGEFQ8N5V2 710 aa10.34□□□□□ -0.75
TMEM106C-208ENST00000548355 ZRANB1Q9UGI0 708 aa10.34□□□□□ -0.75
TMEM106C-208ENST00000548355 AATKQ6ZMQ8 1374 aa10.34□□□□□ -0.75
TMEM106C-208ENST00000548355 LMTK3Q96Q04 1460 aa10.34□□□□□ -0.75
TMEM106C-208ENST00000548355 SSH2Q76I76 1423 aa10.33□□□□□ -0.76
TMEM106C-208ENST00000548355 PPM1GO15355 546 aaPredicted RBP10.33□□□□□ -0.76
TMEM106C-208ENST00000548355 DIAPH1O60610 1272 aaKnown RBP10.33□□□□□ -0.76
TMEM106C-208ENST00000548355 U2AF1L5P0DN76 240 aaPredicted RBP10.33□□□□□ -0.76
TMEM106C-208ENST00000548355 U2AF1Q01081 240 aaKnown RBP eCLIP10.33□□□□□ -0.76
TMEM106C-208ENST00000548355 RUNDC1Q96C34 613 aa10.33□□□□□ -0.76
TMEM106C-208ENST00000548355 PHF23Q9BUL5 403 aaPredicted RBP10.33□□□□□ -0.76
TMEM106C-208ENST00000548355 POLKQ9UBT6 870 aa10.33□□□□□ -0.76
TMEM106C-208ENST00000548355 PHF8Q9UPP1 1060 aa10.33□□□□□ -0.76
TMEM106C-208ENST00000548355 SUPT16HQ9Y5B9 1047 aaKnown RBP10.33□□□□□ -0.76
TMEM106C-208ENST00000548355 RGPD8O14715 1765 aaPredicted RBP10.32□□□□□ -0.76
TMEM106C-208ENST00000548355 COL3A1P02461 1466 aaPredicted RBP10.32□□□□□ -0.76
TMEM106C-208ENST00000548355 PNPLA6Q8IY17 1366 aa10.32□□□□□ -0.76
TMEM106C-208ENST00000548355 APAF1O14727 1248 aa10.32□□□□□ -0.76
TMEM106C-208ENST00000548355 U2SURPO15042 1029 aaKnown RBP10.32□□□□□ -0.76
TMEM106C-208ENST00000548355 FKBP8Q14318 412 aa10.32□□□□□ -0.76
TMEM106C-208ENST00000548355 OVOS2A0A0J9YW53 1432 aa10.32□□□□□ -0.76
TMEM106C-208ENST00000548355 OVOS2Q6IE36 1432 aa10.32□□□□□ -0.76
TMEM106C-208ENST00000548355 ESCO1Q5FWF5 840 aa10.31□□□□□ -0.76
TMEM106C-208ENST00000548355 CDK12Q9NYV4 1490 aaPredicted RBP10.3□□□□□ -0.76
TMEM106C-208ENST00000548355 FBLN1P23142 703 aa10.3□□□□□ -0.76
TMEM106C-208ENST00000548355 PNNQ9H307 717 aaKnown RBP10.3□□□□□ -0.76
TMEM106C-208ENST00000548355 C19orf44Q9H6X5 657 aa10.3□□□□□ -0.76
TMEM106C-208ENST00000548355 EMILIN1Q9Y6C2 1016 aa10.3□□□□□ -0.76
TMEM106C-208ENST00000548355 NCOA3Q9Y6Q9 1424 aa10.3□□□□□ -0.76
TMEM106C-208ENST00000548355 USP31Q70CQ4 1352 aa10.29□□□□□ -0.76
TMEM106C-208ENST00000548355 GOLGA2Q08379 1002 aa10.29□□□□□ -0.76
TMEM106C-208ENST00000548355 RRS1Q15050 365 aaKnown RBP10.29□□□□□ -0.76
TMEM106C-208ENST00000548355 CDCA7LQ96GN5 454 aa10.29□□□□□ -0.76
TMEM106C-208ENST00000548355 ZNF521Q96K83 1311 aa10.29□□□□□ -0.76
TMEM106C-208ENST00000548355 TMEM94Q12767 1356 aa10.28□□□□□ -0.76
TMEM106C-208ENST00000548355 PAK3O75914 559 aaPredicted RBP10.28□□□□□ -0.76
TMEM106C-208ENST00000548355 ATF3P18847 181 aa10.28□□□□□ -0.76
TMEM106C-208ENST00000548355 PSME1Q06323 249 aa10.28□□□□□ -0.76
TMEM106C-208ENST00000548355 TCP11L2Q8N4U5 519 aa10.28□□□□□ -0.76
TMEM106C-208ENST00000548355 MAPK8IP3Q9UPT6 1336 aa10.28□□□□□ -0.76
TMEM106C-208ENST00000548355 NLRP6P59044 892 aa10.27□□□□□ -0.77
TMEM106C-208ENST00000548355 NCBP3Q53F19 620 aaKnown RBP10.27□□□□□ -0.77
TMEM106C-208ENST00000548355 ABTB2Q8N961 1025 aa10.27□□□□□ -0.77
TMEM106C-208ENST00000548355 IQSEC2Q5JU85 1478 aa10.27□□□□□ -0.77
TMEM106C-208ENST00000548355 STRCQ7RTU9 1775 aa10.26□□□□□ -0.77
TMEM106C-208ENST00000548355 MAP2P11137 1827 aaKnown RBP10.26□□□□□ -0.77
TMEM106C-208ENST00000548355 DCCP43146 1447 aa10.26□□□□□ -0.77
TMEM106C-208ENST00000548355 PIK3C2AO00443 1686 aa10.26□□□□□ -0.77
TMEM106C-208ENST00000548355 C1orf167Q5SNV9 1468 aa10.26□□□□□ -0.77
TMEM106C-208ENST00000548355 SOX12O15370 315 aa10.26□□□□□ -0.77
TMEM106C-208ENST00000548355 FCHSD2O94868 740 aa10.26□□□□□ -0.77
TMEM106C-208ENST00000548355 NEFMP07197 916 aa10.26□□□□□ -0.77
TMEM106C-208ENST00000548355 IL13P35225 146 aa10.26□□□□□ -0.77
TMEM106C-208ENST00000548355 ORAI2Q96SN7 254 aa10.26□□□□□ -0.77
TMEM106C-208ENST00000548355 RRP7AQ9Y3A4 280 aaKnown RBP10.26□□□□□ -0.77
TMEM106C-208ENST00000548355 STRCP1A6NGW2 1772 aa10.26□□□□□ -0.77
TMEM106C-208ENST00000548355 MSH6P52701 1360 aa10.26□□□□□ -0.77
TMEM106C-208ENST00000548355 E9PSI1 815 aa10.25□□□□□ -0.77
TMEM106C-208ENST00000548355 SLFN5Q08AF3 891 aa10.25□□□□□ -0.77
TMEM106C-208ENST00000548355 NEUROD2Q15784 382 aa10.25□□□□□ -0.77
TMEM106C-208ENST00000548355 CCDC27Q2M243 656 aa10.25□□□□□ -0.77
TMEM106C-208ENST00000548355 CADPS2Q86UW7 1296 aa10.25□□□□□ -0.77
TMEM106C-208ENST00000548355 WWC1Q8IX03 1113 aa10.25□□□□□ -0.77
TMEM106C-208ENST00000548355 PLEKHF1Q96S99 279 aa10.25□□□□□ -0.77
TMEM106C-208ENST00000548355 RCAN3Q9UKA8 241 aa10.25□□□□□ -0.77
TMEM106C-208ENST00000548355 KIF1AQ12756 1690 aa10.25□□□□□ -0.77
TMEM106C-208ENST00000548355 LRRC7Q96NW7 1537 aa10.24□□□□□ -0.77
TMEM106C-208ENST00000548355 FOXO3O43524 673 aa10.24□□□□□ -0.77
TMEM106C-208ENST00000548355 IRX6P78412 446 aaPredicted RBP10.24□□□□□ -0.77
TMEM106C-208ENST00000548355 NUTM2GQ5VZR2 741 aa10.24□□□□□ -0.77
TMEM106C-208ENST00000548355 ERICH6BQ5W0A0 696 aa10.24□□□□□ -0.77
TMEM106C-208ENST00000548355 RNF123Q5XPI4 1314 aa10.24□□□□□ -0.77
TMEM106C-208ENST00000548355 USP54Q70EL1 1684 aa10.24□□□□□ -0.77
TMEM106C-208ENST00000548355 SBNO1A3KN83 1393 aa10.24□□□□□ -0.77
TMEM106C-208ENST00000548355 MST1RQ04912 1400 aa10.24□□□□□ -0.77
TMEM106C-208ENST00000548355 PRKAR2BP31323 418 aa10.23□□□□□ -0.77
TMEM106C-208ENST00000548355 AMPHP49418 695 aa10.23□□□□□ -0.77
TMEM106C-208ENST00000548355 DUSP27Q5VZP5 1158 aa10.23□□□□□ -0.77
TMEM106C-208ENST00000548355 WDR63Q8IWG1 891 aa10.23□□□□□ -0.77
TMEM106C-208ENST00000548355 RSPH6AQ9H0K4 717 aa10.23□□□□□ -0.77
TMEM106C-208ENST00000548355 DMRT2Q9Y5R5 561 aa10.23□□□□□ -0.77
TMEM106C-208ENST00000548355 MAP3K19Q56UN5 1328 aa10.23□□□□□ -0.77
TMEM106C-208ENST00000548355 FLT4P35916 1363 aa10.23□□□□□ -0.77
TMEM106C-208ENST00000548355 HMOX1P09601 288 aa10.22□□□□□ -0.77
TMEM106C-208ENST00000548355 TMPOP42166 694 aaKnown RBP10.22□□□□□ -0.77
TMEM106C-208ENST00000548355 EIF4A2Q14240 407 aaKnown RBP10.22□□□□□ -0.77
TMEM106C-208ENST00000548355 KRT28Q7Z3Y7 464 aa10.22□□□□□ -0.77
TMEM106C-208ENST00000548355 TRMT2AQ8IZ69 625 aaKnown RBP10.22□□□□□ -0.77
TMEM106C-208ENST00000548355 KIF24Q5T7B8 1368 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms