RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	ZNF511	Q8NB15	262 aa		9.62	□□□□□ -0.87
RPAP3-205	ENST00000548211	ZBTB3	Q9H5J0	574 aa		9.62	□□□□□ -0.87
RPAP3-205	ENST00000548211	MAP10	Q9P2G4	905 aa		9.62	□□□□□ -0.87
RPAP3-205	ENST00000548211	TLL2	Q9Y6L7	1015 aa		9.62	□□□□□ -0.87
RPAP3-205	ENST00000548211	TSC1	Q92574	1164 aa		9.59	□□□□□ -0.87
RPAP3-205	ENST00000548211	WASF2	Q9Y6W5	498 aa		9.59	□□□□□ -0.87
RPAP3-205	ENST00000548211	F12	P00748	615 aa	Predicted RBP	9.58	□□□□□ -0.88
RPAP3-205	ENST00000548211	BMP1	P13497	986 aa		9.58	□□□□□ -0.88
RPAP3-205	ENST00000548211	PRPF38B	Q5VTL8	546 aa	Known RBP	9.58	□□□□□ -0.88
RPAP3-205	ENST00000548211	FOXJ1	Q92949	421 aa		9.58	□□□□□ -0.88
RPAP3-205	ENST00000548211	TRIM47	Q96LD4	638 aa		9.58	□□□□□ -0.88
RPAP3-205	ENST00000548211	RTL5	Q5HYW3	569 aa	Predicted RBP	9.57	□□□□□ -0.88
RPAP3-205	ENST00000548211	NUTM2B	A6NNL0	878 aa	Predicted RBP	9.56	□□□□□ -0.88
RPAP3-205	ENST00000548211	NUTM2E	B1AL46	878 aa	Predicted RBP	9.56	□□□□□ -0.88
RPAP3-205	ENST00000548211	CAPN5	O15484	640 aa	Predicted RBP	9.56	□□□□□ -0.88
RPAP3-205	ENST00000548211	LILRB3	O75022	631 aa		9.56	□□□□□ -0.88
RPAP3-205	ENST00000548211	NFX1	Q12986	1120 aa	Known RBP	9.56	□□□□□ -0.88
RPAP3-205	ENST00000548211	NUTM2D	Q5VT03	806 aa	Predicted RBP	9.56	□□□□□ -0.88
RPAP3-205	ENST00000548211	TRIM46	Q7Z4K8	759 aa		9.56	□□□□□ -0.88
RPAP3-205	ENST00000548211	NUTM2A	Q8IVF1	878 aa	Predicted RBP	9.56	□□□□□ -0.88
RPAP3-205	ENST00000548211	VARS	P26640	1264 aa	Known RBP	9.55	□□□□□ -0.88
RPAP3-205	ENST00000548211	LCE2C	Q5TA81	110 aa		9.55	□□□□□ -0.88
RPAP3-205	ENST00000548211	POLR3E	Q9NVU0	708 aa		9.55	□□□□□ -0.88
RPAP3-205	ENST00000548211	WFS1	O76024	890 aa		9.54	□□□□□ -0.88
RPAP3-205	ENST00000548211	C4orf48	Q5BLP8	95 aa		9.54	□□□□□ -0.88
RPAP3-205	ENST00000548211	SENP2	Q9HC62	589 aa		9.54	□□□□□ -0.88
RPAP3-205	ENST00000548211	NNT	Q13423	1086 aa		9.53	□□□□□ -0.88
RPAP3-205	ENST00000548211	CLK2	P49760	499 aa	Known RBP	9.52	□□□□□ -0.89
RPAP3-205	ENST00000548211	TUSC1	Q2TAM9	212 aa		9.52	□□□□□ -0.89
RPAP3-205	ENST00000548211	GPBP1L1	Q9HC44	474 aa	Predicted RBP	9.51	□□□□□ -0.89
RPAP3-205	ENST00000548211	ARID5B	Q14865	1188 aa		9.5	□□□□□ -0.89
RPAP3-205	ENST00000548211	FBXO31	Q5XUX0	539 aa	Predicted RBP	9.5	□□□□□ -0.89
RPAP3-205	ENST00000548211	MPND	Q8N594	471 aa		9.5	□□□□□ -0.89
RPAP3-205	ENST00000548211	PLEKHG3	A1L390	1219 aa		9.49	□□□□□ -0.89
RPAP3-205	ENST00000548211	TERT	O14746	1132 aa	Known RBP	9.49	□□□□□ -0.89
RPAP3-205	ENST00000548211	FAM174A	Q8TBP5	190 aa		9.49	□□□□□ -0.89
RPAP3-205	ENST00000548211	KIFC2	Q96AC6	838 aa		9.49	□□□□□ -0.89
RPAP3-205	ENST00000548211	TIMP2	P16035	220 aa		9.48	□□□□□ -0.89
RPAP3-205	ENST00000548211	AGER	Q15109	404 aa		9.48	□□□□□ -0.89
RPAP3-205	ENST00000548211	ZFP42	Q96MM3	310 aa		9.48	□□□□□ -0.89
RPAP3-205	ENST00000548211	KLF16	Q9BXK1	252 aa	Predicted RBP	9.48	□□□□□ -0.89
RPAP3-205	ENST00000548211	ADH1C	P00326	375 aa		9.47	□□□□□ -0.89
RPAP3-205	ENST00000548211	WDR4	P57081	412 aa	Known RBP	9.47	□□□□□ -0.89
RPAP3-205	ENST00000548211	CTDSPL2	Q05D32	466 aa		9.47	□□□□□ -0.89
RPAP3-205	ENST00000548211	CDK15	Q96Q40	435 aa		9.47	□□□□□ -0.89
RPAP3-205	ENST00000548211	NR3C2	P08235	984 aa		9.46	□□□□□ -0.9
RPAP3-205	ENST00000548211	HELB	Q8NG08	1087 aa	Predicted RBP	9.46	□□□□□ -0.9
RPAP3-205	ENST00000548211	RSPH6A	Q9H0K4	717 aa		9.46	□□□□□ -0.9
RPAP3-205	ENST00000548211	GRM5	P41594	1212 aa		9.45	□□□□□ -0.9
RPAP3-205	ENST00000548211	BPHL	Q86WA6	291 aa	Predicted RBP	9.45	□□□□□ -0.9
RPAP3-205	ENST00000548211	PROCA1	Q8NCQ7	364 aa	Predicted RBP	9.45	□□□□□ -0.9
RPAP3-205	ENST00000548211	FAM117A	Q9C073	453 aa		9.45	□□□□□ -0.9
RPAP3-205	ENST00000548211	ZFAND3	Q9H8U3	227 aa		9.45	□□□□□ -0.9
RPAP3-205	ENST00000548211	SH3RF1	Q7Z6J0	888 aa		9.44	□□□□□ -0.9
RPAP3-205	ENST00000548211	PURB	Q96QR8	312 aa	Known RBP	9.44	□□□□□ -0.9
RPAP3-205	ENST00000548211	KDM4C	Q9H3R0	1056 aa		9.44	□□□□□ -0.9
RPAP3-205	ENST00000548211	VEGFB	P49765	207 aa		9.43	□□□□□ -0.9
RPAP3-205	ENST00000548211	MRPL14	Q6P1L8	145 aa	Known RBP	9.43	□□□□□ -0.9
RPAP3-205	ENST00000548211	LRRN4	Q8WUT4	740 aa		9.43	□□□□□ -0.9
RPAP3-205	ENST00000548211	ITPKC	Q96DU7	683 aa		9.43	□□□□□ -0.9
RPAP3-205	ENST00000548211	MAGEB6P1	A0A0J9YX57	407 aa		9.42	□□□□□ -0.9
RPAP3-205	ENST00000548211	SOBP	A7XYQ1	873 aa		9.42	□□□□□ -0.9
RPAP3-205	ENST00000548211	ZIC2	O95409	532 aa	Predicted RBP	9.42	□□□□□ -0.9
RPAP3-205	ENST00000548211	SH3BP5L	Q7L8J4	393 aa		9.41	□□□□□ -0.9
RPAP3-205	ENST00000548211	C1QTNF2	Q9BXJ5	285 aa		9.41	□□□□□ -0.9
RPAP3-205	ENST00000548211	NXF1	Q9UBU9	619 aa	Known RBP	9.41	□□□□□ -0.9
RPAP3-205	ENST00000548211	WIPF1	O43516	503 aa		9.4	□□□□□ -0.9
RPAP3-205	ENST00000548211	SKIV2L	Q15477	1246 aa	Known RBP	9.4	□□□□□ -0.9
RPAP3-205	ENST00000548211	ARMC2	Q8NEN0	867 aa		9.4	□□□□□ -0.9
RPAP3-205	ENST00000548211	CARD14	Q9BXL6	1004 aa		9.4	□□□□□ -0.9
RPAP3-205	ENST00000548211	NR5A1	Q13285	461 aa		9.39	□□□□□ -0.91
RPAP3-205	ENST00000548211	SH3D19	Q5HYK7	790 aa		9.38	□□□□□ -0.91
RPAP3-205	ENST00000548211	NBPF14	Q5TI25	921 aa		9.38	□□□□□ -0.91
RPAP3-205	ENST00000548211	BCAN	Q96GW7	911 aa		9.38	□□□□□ -0.91
RPAP3-205	ENST00000548211	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	9.38	□□□□□ -0.91
RPAP3-205	ENST00000548211	ATP1B4	Q9UN42	357 aa	Predicted RBP	9.38	□□□□□ -0.91
RPAP3-205	ENST00000548211	FSHR	P23945	695 aa		9.37	□□□□□ -0.91
RPAP3-205	ENST00000548211	SCARF1	Q14162	830 aa		9.37	□□□□□ -0.91
RPAP3-205	ENST00000548211	NR6A1	Q15406	480 aa		9.37	□□□□□ -0.91
RPAP3-205	ENST00000548211	C6orf118	Q5T5N4	469 aa		9.37	□□□□□ -0.91
RPAP3-205	ENST00000548211	ERFE	Q4G0M1	354 aa		9.36	□□□□□ -0.91
RPAP3-205	ENST00000548211	VASH1	Q7L8A9	365 aa	Predicted RBP	9.36	□□□□□ -0.91
RPAP3-205	ENST00000548211	TRMT44	Q8IYL2	757 aa	Known RBP	9.35	□□□□□ -0.91
RPAP3-205	ENST00000548211	EPS8L1	Q8TE68	723 aa		9.35	□□□□□ -0.91
RPAP3-205	ENST00000548211	DDRGK1	Q96HY6	314 aa		9.35	□□□□□ -0.91
RPAP3-205	ENST00000548211	AP1G2	O75843	785 aa		9.34	□□□□□ -0.91
RPAP3-205	ENST00000548211	GMPR	P36959	345 aa		9.34	□□□□□ -0.91
RPAP3-205	ENST00000548211	SLC16A10	Q8TF71	515 aa		9.34	□□□□□ -0.91
RPAP3-205	ENST00000548211	MAP4K5	Q9Y4K4	846 aa		9.34	□□□□□ -0.91
RPAP3-205	ENST00000548211	ERBB4	Q15303	1308 aa		9.33	□□□□□ -0.92
RPAP3-205	ENST00000548211		H3BM21	787 aa		9.33	□□□□□ -0.92
RPAP3-205	ENST00000548211	PPP2R2D	Q66LE6	453 aa		9.33	□□□□□ -0.92
RPAP3-205	ENST00000548211	FKBPL	Q9UIM3	349 aa		9.33	□□□□□ -0.92
RPAP3-205	ENST00000548211	MEIOB	Q8N635	442 aa		9.32	□□□□□ -0.92
RPAP3-205	ENST00000548211	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	9.32	□□□□□ -0.92
RPAP3-205	ENST00000548211	OCSTAMP	Q9BR26	566 aa		9.32	□□□□□ -0.92
RPAP3-205	ENST00000548211	HMX1	Q9NP08	348 aa	Predicted RBP	9.32	□□□□□ -0.92
RPAP3-205	ENST00000548211	INSM1	Q01101	510 aa	Predicted RBP	9.31	□□□□□ -0.92
RPAP3-205	ENST00000548211	PDXDC2P	Q6P474	469 aa		9.31	□□□□□ -0.92
RPAP3-205	ENST00000548211	LINC00528	Q8N1L1	170 aa		9.31	□□□□□ -0.92

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