RNA–Protein interactions for RNA: ENST00000547877.5

LETMD1-212, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 2,020 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-212ENST00000547877 TOM1O60784 492 aa20.28■□□□□ 0.84
LETMD1-212ENST00000547877 ANP32CO43423 234 aa20.27■□□□□ 0.84
LETMD1-212ENST00000547877 DDX17Q92841 729 aaKnown RBP20.27■□□□□ 0.84
LETMD1-212ENST00000547877 TTC21BQ7Z4L5 1316 aa20.27■□□□□ 0.84
LETMD1-212ENST00000547877 NPC1L1Q9UHC9 1359 aa20.27■□□□□ 0.84
LETMD1-212ENST00000547877 XPCQ01831 940 aaPredicted RBP20.27■□□□□ 0.84
LETMD1-212ENST00000547877 FYB1O15117 783 aa20.26■□□□□ 0.83
LETMD1-212ENST00000547877 NPHP3Q7Z494 1330 aa20.26■□□□□ 0.83
LETMD1-212ENST00000547877 ROBO1Q9Y6N7 1651 aa20.25■□□□□ 0.83
LETMD1-212ENST00000547877 PRKRIP1Q9H875 184 aaPredicted RBP20.25■□□□□ 0.83
LETMD1-212ENST00000547877 UBAP1LF5GYI3 381 aa20.24■□□□□ 0.83
LETMD1-212ENST00000547877 KRT28Q7Z3Y7 464 aa20.24■□□□□ 0.83
LETMD1-212ENST00000547877 BRD4O60885 1362 aaPredicted RBP20.24■□□□□ 0.83
LETMD1-212ENST00000547877 KIF20BQ96Q89 1820 aa20.24■□□□□ 0.83
LETMD1-212ENST00000547877 PAK3O75914 559 aaPredicted RBP20.24■□□□□ 0.83
LETMD1-212ENST00000547877 NME9Q86XW9 330 aa20.24■□□□□ 0.83
LETMD1-212ENST00000547877 GGNBP2Q9H3C7 697 aa20.24■□□□□ 0.83
LETMD1-212ENST00000547877 TTC21AQ8NDW8 1320 aa20.24■□□□□ 0.83
LETMD1-212ENST00000547877 NSD2O96028 1365 aa20.24■□□□□ 0.83
LETMD1-212ENST00000547877 PARD3Q8TEW0 1356 aa20.22■□□□□ 0.83
LETMD1-212ENST00000547877 TRPM3Q9HCF6 1732 aaPredicted RBP20.22■□□□□ 0.83
LETMD1-212ENST00000547877 PXDNQ92626 1479 aa20.21■□□□□ 0.83
LETMD1-212ENST00000547877 PIP4K2BP78356 416 aa20.21■□□□□ 0.83
LETMD1-212ENST00000547877 NHSL1Q5SYE7 1610 aa20.21■□□□□ 0.83
LETMD1-212ENST00000547877 PIK3C2AO00443 1686 aa20.2■□□□□ 0.82
LETMD1-212ENST00000547877 ZRANB1Q9UGI0 708 aa20.2■□□□□ 0.82
LETMD1-212ENST00000547877 RALBP1Q15311 655 aa20.19■□□□□ 0.82
LETMD1-212ENST00000547877 ABTB2Q8N961 1025 aa20.19■□□□□ 0.82
LETMD1-212ENST00000547877 ANKRD26Q9UPS8 1709 aa20.19■□□□□ 0.82
LETMD1-212ENST00000547877 MORC1Q86VD1 984 aa20.19■□□□□ 0.82
LETMD1-212ENST00000547877 SOS2Q07890 1332 aaPredicted RBP20.18■□□□□ 0.82
LETMD1-212ENST00000547877 SBNO1A3KN83 1393 aa20.17■□□□□ 0.82
LETMD1-212ENST00000547877 COG3Q96JB2 828 aa20.17■□□□□ 0.82
LETMD1-212ENST00000547877 OVOS2A0A0J9YW53 1432 aa20.16■□□□□ 0.82
LETMD1-212ENST00000547877 OVOS2Q6IE36 1432 aa20.16■□□□□ 0.82
LETMD1-212ENST00000547877 NUTM2GQ5VZR2 741 aa20.16■□□□□ 0.82
LETMD1-212ENST00000547877 AHDC1Q5TGY3 1603 aaPredicted RBP20.16■□□□□ 0.82
LETMD1-212ENST00000547877 NLRP6P59044 892 aa20.15■□□□□ 0.82
LETMD1-212ENST00000547877 ALS2Q96Q42 1657 aa20.15■□□□□ 0.82
LETMD1-212ENST00000547877 USP31Q70CQ4 1352 aa20.15■□□□□ 0.82
LETMD1-212ENST00000547877 TNNT2P45379 298 aaPredicted RBP20.15■□□□□ 0.82
LETMD1-212ENST00000547877 LMOD2Q6P5Q4 547 aa20.15■□□□□ 0.82
LETMD1-212ENST00000547877 TNS3Q68CZ2 1445 aa20.15■□□□□ 0.82
LETMD1-212ENST00000547877 SPATA31A3Q5VYP0 1347 aa20.14■□□□□ 0.81
LETMD1-212ENST00000547877 MYBBP1AQ9BQG0 1328 aaKnown RBP20.13■□□□□ 0.81
LETMD1-212ENST00000547877 MARF1Q9Y4F3 1742 aaKnown RBP20.12■□□□□ 0.81
LETMD1-212ENST00000547877 USP54Q70EL1 1684 aa20.12■□□□□ 0.81
LETMD1-212ENST00000547877 NLRP13Q86W25 1043 aa20.11■□□□□ 0.81
LETMD1-212ENST00000547877 PPP2R1AP30153 589 aa20.1■□□□□ 0.81
LETMD1-212ENST00000547877 ARHGEF10O15013 1369 aa20.1■□□□□ 0.81
LETMD1-212ENST00000547877 PHLPP1O60346 1717 aa20.1■□□□□ 0.81
LETMD1-212ENST00000547877 FBLN1P23142 703 aa20.09■□□□□ 0.81
LETMD1-212ENST00000547877 LRRC59Q96AG4 307 aaKnown RBP20.08■□□□□ 0.8
LETMD1-212ENST00000547877 SOX12O15370 315 aa20.07■□□□□ 0.8
LETMD1-212ENST00000547877 PLEKHG5O94827 1062 aa20.07■□□□□ 0.8
LETMD1-212ENST00000547877 COL16A1Q07092 1604 aaPredicted RBP20.07■□□□□ 0.8
LETMD1-212ENST00000547877 USP19O94966 1318 aa20.07■□□□□ 0.8
LETMD1-212ENST00000547877 AATKQ6ZMQ8 1374 aa20.06■□□□□ 0.8
LETMD1-212ENST00000547877 CCDC184Q52MB2 194 aa20.05■□□□□ 0.8
LETMD1-212ENST00000547877 MED1Q15648 1581 aaPredicted RBP20.05■□□□□ 0.8
LETMD1-212ENST00000547877 SLIT3O75094 1523 aa20.05■□□□□ 0.8
LETMD1-212ENST00000547877 MAP2P11137 1827 aaKnown RBP20.05■□□□□ 0.8
LETMD1-212ENST00000547877 GCP02774 474 aa20.03■□□□□ 0.8
LETMD1-212ENST00000547877 MTHFSP49914 203 aa20.03■□□□□ 0.8
LETMD1-212ENST00000547877 RRS1Q15050 365 aaKnown RBP20.03■□□□□ 0.8
LETMD1-212ENST00000547877 KCNH5Q8NCM2 988 aa20.03■□□□□ 0.8
LETMD1-212ENST00000547877 POLKQ9UBT6 870 aa20.03■□□□□ 0.8
LETMD1-212ENST00000547877 CABLES1Q8TDN4 633 aa20.03■□□□□ 0.8
LETMD1-212ENST00000547877 NFAT5O94916 1531 aa20.02■□□□□ 0.8
LETMD1-212ENST00000547877 MRS2Q9HD23 443 aa20.02■□□□□ 0.79
LETMD1-212ENST00000547877 CRYBG1Q9Y4K1 1723 aa20.02■□□□□ 0.79
LETMD1-212ENST00000547877 EMILIN1Q9Y6C2 1016 aa20.02■□□□□ 0.79
LETMD1-212ENST00000547877 PHRF1Q9P1Y6 1649 aaKnown RBP20.01■□□□□ 0.79
LETMD1-212ENST00000547877 PPM1GO15355 546 aaPredicted RBP20■□□□□ 0.79
LETMD1-212ENST00000547877 PNPLA6Q8IY17 1366 aa20■□□□□ 0.79
LETMD1-212ENST00000547877 MAP3K19Q56UN5 1328 aa19.99■□□□□ 0.79
LETMD1-212ENST00000547877 SMG6Q86US8 1419 aaKnown RBP19.99■□□□□ 0.79
LETMD1-212ENST00000547877 COL22A1Q8NFW1 1626 aaPredicted RBP19.98■□□□□ 0.79
LETMD1-212ENST00000547877 ABCA3Q99758 1704 aa19.97■□□□□ 0.79
LETMD1-212ENST00000547877 LTN1O94822 1766 aa19.97■□□□□ 0.79
LETMD1-212ENST00000547877 HSPA1LP34931 641 aa19.97■□□□□ 0.79
LETMD1-212ENST00000547877 PEAK1Q9H792 1746 aa19.96■□□□□ 0.79
LETMD1-212ENST00000547877 CDK12Q9NYV4 1490 aaPredicted RBP19.96■□□□□ 0.79
LETMD1-212ENST00000547877 HAP1P54257 671 aaPredicted RBP19.95■□□□□ 0.78
LETMD1-212ENST00000547877 ZC3H6P61129 1189 aaKnown RBP19.95■□□□□ 0.78
LETMD1-212ENST00000547877 ARHGEF25Q86VW2 580 aa19.95■□□□□ 0.78
LETMD1-212ENST00000547877 AMPHP49418 695 aa19.95■□□□□ 0.78
LETMD1-212ENST00000547877 CFAP53Q96M91 514 aa19.95■□□□□ 0.78
LETMD1-212ENST00000547877 ZBTB7CA1YPR0 619 aa19.93■□□□□ 0.78
LETMD1-212ENST00000547877 FLT4P35916 1363 aa19.93■□□□□ 0.78
LETMD1-212ENST00000547877 KIF24Q5T7B8 1368 aa19.93■□□□□ 0.78
LETMD1-212ENST00000547877 SHPRHQ149N8 1683 aa19.93■□□□□ 0.78
LETMD1-212ENST00000547877 INSRP06213 1382 aa19.93■□□□□ 0.78
LETMD1-212ENST00000547877 JCADQ9P266 1359 aa19.93■□□□□ 0.78
LETMD1-212ENST00000547877 COL3A1P02461 1466 aaPredicted RBP19.93■□□□□ 0.78
LETMD1-212ENST00000547877 HSP90AB2PQ58FF8 381 aa19.92■□□□□ 0.78
LETMD1-212ENST00000547877 CPDO75976 1380 aa19.92■□□□□ 0.78
LETMD1-212ENST00000547877 KIAA0232Q92628 1395 aa19.92■□□□□ 0.78
LETMD1-212ENST00000547877 HOXC9P31274 260 aa19.92■□□□□ 0.78
LETMD1-212ENST00000547877 RTL1A6NKG5 1358 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms