RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 POLR3AO14802 1390 aaPredicted RBP15.28■□□□□ 0.04
LINC00661-202ENST00000547102 PPIP5K1Q6PFW1 1433 aa15.27■□□□□ 0.04
LINC00661-202ENST00000547102 ATAD2Q6PL18 1390 aa15.27■□□□□ 0.04
LINC00661-202ENST00000547102 ACEP12821 1306 aa15.27■□□□□ 0.04
LINC00661-202ENST00000547102 UPF1Q92900 1129 aaKnown RBP eCLIP15.27■□□□□ 0.04
LINC00661-202ENST00000547102 GJD4Q96KN9 370 aaPredicted RBP15.27■□□□□ 0.04
LINC00661-202ENST00000547102 EVC2Q86UK5 1308 aa15.26■□□□□ 0.03
LINC00661-202ENST00000547102 PLEKHG3A1L390 1219 aa15.26■□□□□ 0.03
LINC00661-202ENST00000547102 CABP2Q9NPB3 220 aa15.26■□□□□ 0.03
LINC00661-202ENST00000547102 COL14A1Q05707 1796 aaKnown RBP15.26■□□□□ 0.03
LINC00661-202ENST00000547102 RALGAPBQ86X10 1494 aa15.26■□□□□ 0.03
LINC00661-202ENST00000547102 NBPF8Q3BBV2 869 aa15.25■□□□□ 0.03
LINC00661-202ENST00000547102 CCDC9Q9Y3X0 531 aaKnown RBP15.25■□□□□ 0.03
LINC00661-202ENST00000547102 CRYBG1Q9Y4K1 1723 aa15.25■□□□□ 0.03
LINC00661-202ENST00000547102 GLI3P10071 1580 aa15.24■□□□□ 0.03
LINC00661-202ENST00000547102 FAM83GA6ND36 823 aa15.23■□□□□ 0.03
LINC00661-202ENST00000547102 VPS72Q15906 364 aa15.23■□□□□ 0.03
LINC00661-202ENST00000547102 PHRF1Q9P1Y6 1649 aaKnown RBP15.23■□□□□ 0.03
LINC00661-202ENST00000547102 CARD11Q9BXL7 1154 aa15.22■□□□□ 0.03
LINC00661-202ENST00000547102 PRDM11Q9NQV5 511 aa15.22■□□□□ 0.03
LINC00661-202ENST00000547102 NRAPQ86VF7 1730 aa15.22■□□□□ 0.03
LINC00661-202ENST00000547102 BRD4O60885 1362 aaPredicted RBP15.22■□□□□ 0.03
LINC00661-202ENST00000547102 NUTM2GQ5VZR2 741 aa15.21■□□□□ 0.03
LINC00661-202ENST00000547102 BTG4Q9NY30 223 aa15.21■□□□□ 0.03
LINC00661-202ENST00000547102 ABTB2Q8N961 1025 aa15.2■□□□□ 0.02
LINC00661-202ENST00000547102 CABP1Q9NZU7 370 aa15.19■□□□□ 0.02
LINC00661-202ENST00000547102 KIAA0232Q92628 1395 aa15.19■□□□□ 0.02
LINC00661-202ENST00000547102 USP6P35125 1406 aa15.18■□□□□ 0.02
LINC00661-202ENST00000547102 A0A0G2JS52 829 aa15.18■□□□□ 0.02
LINC00661-202ENST00000547102 MYT1Q01538 1121 aa15.18■□□□□ 0.02
LINC00661-202ENST00000547102 SBNO2Q9Y2G9 1366 aa15.18■□□□□ 0.02
LINC00661-202ENST00000547102 NRKQ7Z2Y5 1582 aa15.18■□□□□ 0.02
LINC00661-202ENST00000547102 NLRP13Q86W25 1043 aa15.17■□□□□ 0.02
LINC00661-202ENST00000547102 SEPT12Q8IYM1 358 aa15.17■□□□□ 0.02
LINC00661-202ENST00000547102 ZC3H6P61129 1189 aaKnown RBP15.16■□□□□ 0.02
LINC00661-202ENST00000547102 USP19O94966 1318 aa15.16■□□□□ 0.02
LINC00661-202ENST00000547102 BRWD3Q6RI45 1802 aa15.15■□□□□ 0.02
LINC00661-202ENST00000547102 CHRNA2Q15822 529 aa15.15■□□□□ 0.02
LINC00661-202ENST00000547102 AKAP12Q02952 1782 aa15.14■□□□□ 0.01
LINC00661-202ENST00000547102 ZNF692Q9BU19 519 aaPredicted RBP15.14■□□□□ 0.01
LINC00661-202ENST00000547102 CPDO75976 1380 aa15.13■□□□□ 0.01
LINC00661-202ENST00000547102 FAM98CQ17RN3 349 aaKnown RBP15.13■□□□□ 0.01
LINC00661-202ENST00000547102 CCDC125Q86Z20 511 aa15.13■□□□□ 0.01
LINC00661-202ENST00000547102 STRN4Q9NRL3 753 aa15.13■□□□□ 0.01
LINC00661-202ENST00000547102 SPATA31A5Q5VU36 1347 aa15.13■□□□□ 0.01
LINC00661-202ENST00000547102 SPATA31A7Q8IWB4 1347 aa15.13■□□□□ 0.01
LINC00661-202ENST00000547102 PIK3C2AO00443 1686 aa15.12■□□□□ 0.01
LINC00661-202ENST00000547102 ONECUT3O60422 494 aaPredicted RBP15.12■□□□□ 0.01
LINC00661-202ENST00000547102 EVA1CP58658 441 aa15.12■□□□□ 0.01
LINC00661-202ENST00000547102 NLRP6P59044 892 aa15.12■□□□□ 0.01
LINC00661-202ENST00000547102 KRT27Q7Z3Y8 459 aa15.12■□□□□ 0.01
LINC00661-202ENST00000547102 SSH2Q76I76 1423 aa15.11■□□□□ 0.01
LINC00661-202ENST00000547102 GCP02774 474 aa15.11■□□□□ 0.01
LINC00661-202ENST00000547102 KTN1Q86UP2 1357 aaKnown RBP15.11■□□□□ 0.01
LINC00661-202ENST00000547102 MON2Q7Z3U7 1717 aa15.1■□□□□ 0.01
LINC00661-202ENST00000547102 ZBTB7CA1YPR0 619 aa15.1■□□□□ 0.01
LINC00661-202ENST00000547102 SF3B2Q13435 895 aaKnown RBP15.1■□□□□ 0.01
LINC00661-202ENST00000547102 SLIT3O75094 1523 aa15.1■□□□□ 0.01
LINC00661-202ENST00000547102 TTC21BQ7Z4L5 1316 aa15.1■□□□□ 0.01
LINC00661-202ENST00000547102 TTC21AQ8NDW8 1320 aa15.1■□□□□ 0.01
LINC00661-202ENST00000547102 LMO7Q8WWI1 1683 aa15.09■□□□□ 0.01
LINC00661-202ENST00000547102 BLMP54132 1417 aaPredicted RBP15.09■□□□□ 0.01
LINC00661-202ENST00000547102 TMC1Q8TDI8 760 aa15.09■□□□□ 0.01
LINC00661-202ENST00000547102 PCGF6Q9BYE7 350 aa15.09■□□□□ 0.01
LINC00661-202ENST00000547102 SPATA31A1Q5TZJ5 1347 aa15.09■□□□□ 0.01
LINC00661-202ENST00000547102 CPSF1Q10570 1443 aaKnown RBP15.09■□□□□ 0.01
LINC00661-202ENST00000547102 SLC24A1O60721 1099 aa15.08■□□□□ 0
LINC00661-202ENST00000547102 HDGFL2Q7Z4V5 671 aaPredicted RBP15.08■□□□□ 0
LINC00661-202ENST00000547102 THSD7AQ9UPZ6 1657 aa15.08■□□□□ 0
LINC00661-202ENST00000547102 CLSPNQ9HAW4 1339 aa15.08■□□□□ 0
LINC00661-202ENST00000547102 CAMTA1Q9Y6Y1 1673 aa15.07■□□□□ 0
LINC00661-202ENST00000547102 KCNH5Q8NCM2 988 aa15.07■□□□□ 0
LINC00661-202ENST00000547102 USP35Q9P2H5 1018 aa15.07■□□□□ 0
LINC00661-202ENST00000547102 EP400Q96L91 3159 aa15.07■□□□□ 0
LINC00661-202ENST00000547102 TERF2IPQ9NYB0 399 aa15.06■□□□□ 0
LINC00661-202ENST00000547102 COL5A2P05997 1499 aaPredicted RBP15.06■□□□□ 0
LINC00661-202ENST00000547102 ST20-MTHFSA0A0A6YYL1 179 aa15.05■□□□□ -0
LINC00661-202ENST00000547102 PUS7Q96PZ0 661 aaKnown RBP15.05■□□□□ -0
LINC00661-202ENST00000547102 AATKQ6ZMQ8 1374 aa15.05■□□□□ -0
LINC00661-202ENST00000547102 USP47Q96K76 1375 aa15.05■□□□□ -0
LINC00661-202ENST00000547102 NINLQ9Y2I6 1382 aa15.05■□□□□ -0
LINC00661-202ENST00000547102 SOX12O15370 315 aa15.04■□□□□ -0
LINC00661-202ENST00000547102 LARP1Q6PKG0 1096 aaKnown RBP15.04■□□□□ -0
LINC00661-202ENST00000547102 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.04■□□□□ -0
LINC00661-202ENST00000547102 TCP11L2Q8N4U5 519 aa15.04■□□□□ -0
LINC00661-202ENST00000547102 TIMELESSQ9UNS1 1208 aa15.04■□□□□ -0
LINC00661-202ENST00000547102 EDC4Q6P2E9 1401 aaKnown RBP15.03■□□□□ -0
LINC00661-202ENST00000547102 BARGINQ6ZT62 677 aa15.03■□□□□ -0
LINC00661-202ENST00000547102 CD163L1Q9NR16 1453 aa15.02■□□□□ -0
LINC00661-202ENST00000547102 CRB1P82279 1406 aa15.02■□□□□ -0
LINC00661-202ENST00000547102 TESK2Q96S53 571 aa15.02■□□□□ -0
LINC00661-202ENST00000547102 SLC12A5Q9H2X9 1139 aa15.02■□□□□ -0
LINC00661-202ENST00000547102 ZRANB1Q9UGI0 708 aa15.02■□□□□ -0
LINC00661-202ENST00000547102 THRAP3Q9Y2W1 955 aaKnown RBP15.02■□□□□ -0
LINC00661-202ENST00000547102 RGPD1P0DJD0 1748 aa15.02□□□□□ -0.01
LINC00661-202ENST00000547102 USP54Q70EL1 1684 aa15.02□□□□□ -0.01
LINC00661-202ENST00000547102 A0A1W2PP64 1363 aa15.01□□□□□ -0.01
LINC00661-202ENST00000547102 NFAT5O94916 1531 aa15.01□□□□□ -0.01
LINC00661-202ENST00000547102 BAG6P46379 1132 aa15□□□□□ -0.01
LINC00661-202ENST00000547102 TMF1P82094 1093 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms