RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 MEX3CQ5U5Q3 659 aaKnown RBP23.4■■□□□ 1.34
CCDC38-203ENST00000546803 LRP6O75581 1613 aa23.39■■□□□ 1.33
CCDC38-203ENST00000546803 SSH2Q76I76 1423 aa23.39■■□□□ 1.33
CCDC38-203ENST00000546803 KTN1Q86UP2 1357 aaKnown RBP23.39■■□□□ 1.33
CCDC38-203ENST00000546803 COL22A1Q8NFW1 1626 aaPredicted RBP23.38■■□□□ 1.33
CCDC38-203ENST00000546803 ABTB2Q8N961 1025 aa23.38■■□□□ 1.33
CCDC38-203ENST00000546803 TRPM3Q9HCF6 1732 aaPredicted RBP23.38■■□□□ 1.33
CCDC38-203ENST00000546803 PHF23Q9BUL5 403 aaPredicted RBP23.37■■□□□ 1.33
CCDC38-203ENST00000546803 CD163L1Q9NR16 1453 aa23.36■■□□□ 1.33
CCDC38-203ENST00000546803 TTC21BQ7Z4L5 1316 aa23.36■■□□□ 1.33
CCDC38-203ENST00000546803 TTC21AQ8NDW8 1320 aa23.36■■□□□ 1.33
CCDC38-203ENST00000546803 HAP1P54257 671 aaPredicted RBP23.36■■□□□ 1.33
CCDC38-203ENST00000546803 ADAMTS2O95450 1211 aa23.35■■□□□ 1.33
CCDC38-203ENST00000546803 NLRP13Q86W25 1043 aa23.34■■□□□ 1.33
CCDC38-203ENST00000546803 CABLES1Q8TDN4 633 aa23.34■■□□□ 1.33
CCDC38-203ENST00000546803 A0A1W2PP64 1363 aa23.34■■□□□ 1.33
CCDC38-203ENST00000546803 ANKRD36BQ8N2N9 1353 aa23.34■■□□□ 1.33
CCDC38-203ENST00000546803 ALS2Q96Q42 1657 aa23.32■■□□□ 1.32
CCDC38-203ENST00000546803 NUTM2GQ5VZR2 741 aa23.32■■□□□ 1.32
CCDC38-203ENST00000546803 POLR3GLQ9BT43 218 aa23.32■■□□□ 1.32
CCDC38-203ENST00000546803 EDC4Q6P2E9 1401 aaKnown RBP23.32■■□□□ 1.32
CCDC38-203ENST00000546803 PLEKHG5O94827 1062 aa23.31■■□□□ 1.32
CCDC38-203ENST00000546803 NLRP6P59044 892 aa23.31■■□□□ 1.32
CCDC38-203ENST00000546803 C11orf95C9JLR9 678 aaPredicted RBP23.3■■□□□ 1.32
CCDC38-203ENST00000546803 C8orf37Q96NL8 207 aa23.3■■□□□ 1.32
CCDC38-203ENST00000546803 NGLY1Q96IV0 654 aa23.29■■□□□ 1.32
CCDC38-203ENST00000546803 USP19O94966 1318 aa23.29■■□□□ 1.32
CCDC38-203ENST00000546803 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.28■■□□□ 1.32
CCDC38-203ENST00000546803 AKAP12Q02952 1782 aa23.27■■□□□ 1.32
CCDC38-203ENST00000546803 ZNF772Q68DY9 489 aaPredicted RBP23.26■■□□□ 1.31
CCDC38-203ENST00000546803 FNBP4Q8N3X1 1017 aaPredicted RBP23.26■■□□□ 1.31
CCDC38-203ENST00000546803 RGS17Q9UGC6 210 aaPredicted RBP23.26■■□□□ 1.31
CCDC38-203ENST00000546803 KIF7Q2M1P5 1343 aa23.26■■□□□ 1.31
CCDC38-203ENST00000546803 AFF2P51816 1311 aa23.25■■□□□ 1.31
CCDC38-203ENST00000546803 USP31Q70CQ4 1352 aa23.25■■□□□ 1.31
CCDC38-203ENST00000546803 GCP02774 474 aa23.24■■□□□ 1.31
CCDC38-203ENST00000546803 NME9Q86XW9 330 aa23.24■■□□□ 1.31
CCDC38-203ENST00000546803 MON2Q7Z3U7 1717 aa23.23■■□□□ 1.31
CCDC38-203ENST00000546803 NRKQ7Z2Y5 1582 aa23.23■■□□□ 1.31
CCDC38-203ENST00000546803 KCNH5Q8NCM2 988 aa23.22■■□□□ 1.31
CCDC38-203ENST00000546803 CARD14Q9BXL6 1004 aa23.21■■□□□ 1.31
CCDC38-203ENST00000546803 PRDM11Q9NQV5 511 aa23.21■■□□□ 1.31
CCDC38-203ENST00000546803 FAM83GA6ND36 823 aa23.2■■□□□ 1.3
CCDC38-203ENST00000546803 USP21Q9UK80 565 aa23.2■■□□□ 1.3
CCDC38-203ENST00000546803 CCDC7Q96M83 1385 aa23.19■■□□□ 1.3
CCDC38-203ENST00000546803 ZC3H6P61129 1189 aaKnown RBP23.19■■□□□ 1.3
CCDC38-203ENST00000546803 PANK3Q9H999 370 aa23.19■■□□□ 1.3
CCDC38-203ENST00000546803 PIK3C2AO00443 1686 aa23.19■■□□□ 1.3
CCDC38-203ENST00000546803 CPDO75976 1380 aa23.18■■□□□ 1.3
CCDC38-203ENST00000546803 KIAA0232Q92628 1395 aa23.18■■□□□ 1.3
CCDC38-203ENST00000546803 ZRANB1Q9UGI0 708 aa23.18■■□□□ 1.3
CCDC38-203ENST00000546803 SLIT3O75094 1523 aa23.18■■□□□ 1.3
CCDC38-203ENST00000546803 NSD3Q9BZ95 1437 aa23.17■■□□□ 1.3
CCDC38-203ENST00000546803 WASHC2AQ641Q2 1341 aa23.17■■□□□ 1.3
CCDC38-203ENST00000546803 MYOM1P52179 1685 aa23.17■■□□□ 1.3
CCDC38-203ENST00000546803 FYB1O15117 783 aa23.17■■□□□ 1.3
CCDC38-203ENST00000546803 COG3Q96JB2 828 aa23.17■■□□□ 1.3
CCDC38-203ENST00000546803 SLIT2O94813 1529 aa23.17■■□□□ 1.3
CCDC38-203ENST00000546803 POTEAQ6S8J7 498 aa23.16■■□□□ 1.3
CCDC38-203ENST00000546803 UNC5CLQ8IV45 518 aa23.16■■□□□ 1.3
CCDC38-203ENST00000546803 ABCA3Q99758 1704 aa23.16■■□□□ 1.3
CCDC38-203ENST00000546803 OVOS2A0A0J9YW53 1432 aa23.15■■□□□ 1.3
CCDC38-203ENST00000546803 OVOS2Q6IE36 1432 aa23.15■■□□□ 1.3
CCDC38-203ENST00000546803 CGNL1Q0VF96 1302 aa23.14■■□□□ 1.3
CCDC38-203ENST00000546803 CRYBG1Q9Y4K1 1723 aa23.14■■□□□ 1.3
CCDC38-203ENST00000546803 BCL9LQ86UU0 1499 aa23.14■■□□□ 1.29
CCDC38-203ENST00000546803 QTRT2Q9H974 415 aaKnown RBP23.14■■□□□ 1.29
CCDC38-203ENST00000546803 TRPC5Q9UL62 973 aaPredicted RBP23.14■■□□□ 1.29
CCDC38-203ENST00000546803 CHRNA2Q15822 529 aa23.13■■□□□ 1.29
CCDC38-203ENST00000546803 PHRF1Q9P1Y6 1649 aaKnown RBP23.12■■□□□ 1.29
CCDC38-203ENST00000546803 ARHGEF25Q86VW2 580 aa23.12■■□□□ 1.29
CCDC38-203ENST00000546803 GGNBP2Q9H3C7 697 aa23.12■■□□□ 1.29
CCDC38-203ENST00000546803 BTG4Q9NY30 223 aa23.12■■□□□ 1.29
CCDC38-203ENST00000546803 SOX12O15370 315 aa23.11■■□□□ 1.29
CCDC38-203ENST00000546803 AATKQ6ZMQ8 1374 aa23.1■■□□□ 1.29
CCDC38-203ENST00000546803 MARF1Q9Y4F3 1742 aaKnown RBP23.1■■□□□ 1.29
CCDC38-203ENST00000546803 RXRBP28702 533 aa23.09■■□□□ 1.29
CCDC38-203ENST00000546803 KNSTRNQ9Y448 316 aa23.09■■□□□ 1.29
CCDC38-203ENST00000546803 ATRNO75882 1429 aa23.08■■□□□ 1.29
CCDC38-203ENST00000546803 RBM6P78332 1123 aaKnown RBP23.08■■□□□ 1.29
CCDC38-203ENST00000546803 VPS72Q15906 364 aa23.08■■□□□ 1.29
CCDC38-203ENST00000546803 USP54Q70EL1 1684 aa23.08■■□□□ 1.29
CCDC38-203ENST00000546803 COL14A1Q05707 1796 aaKnown RBP23.08■■□□□ 1.29
CCDC38-203ENST00000546803 ZBTB7CA1YPR0 619 aa23.07■■□□□ 1.28
CCDC38-203ENST00000546803 NFAT5O94916 1531 aa23.07■■□□□ 1.28
CCDC38-203ENST00000546803 EVA1CP58658 441 aa23.05■■□□□ 1.28
CCDC38-203ENST00000546803 GJD4Q96KN9 370 aaPredicted RBP23.05■■□□□ 1.28
CCDC38-203ENST00000546803 NSD2O96028 1365 aa23.04■■□□□ 1.28
CCDC38-203ENST00000546803 PER1O15534 1290 aaPredicted RBP23.03■■□□□ 1.28
CCDC38-203ENST00000546803 ILDR2Q71H61 639 aa23.03■■□□□ 1.28
CCDC38-203ENST00000546803 NWD2Q9ULI1 1742 aa23.02■■□□□ 1.28
CCDC38-203ENST00000546803 STRN4Q9NRL3 753 aa23.02■■□□□ 1.28
CCDC38-203ENST00000546803 CCDC9Q9Y3X0 531 aaKnown RBP23.02■■□□□ 1.28
CCDC38-203ENST00000546803 CAMTA1Q9Y6Y1 1673 aa23■■□□□ 1.27
CCDC38-203ENST00000546803 AMER1Q5JTC6 1135 aaPredicted RBP23■■□□□ 1.27
CCDC38-203ENST00000546803 AXIN2Q9Y2T1 843 aa23■■□□□ 1.27
CCDC38-203ENST00000546803 PLCH1Q4KWH8 1693 aa23■■□□□ 1.27
CCDC38-203ENST00000546803 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.99■■□□□ 1.27
CCDC38-203ENST00000546803 ABCC6O95255 1503 aa22.99■■□□□ 1.27
CCDC38-203ENST00000546803 IP6K1Q92551 441 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms