RNA–Protein interactions for RNA: ENST00000546519.1

SLC38A1-203, Transcript of solute carrier family 38 member 1, humanhuman

TSL 3

Gene SLC38A1, Length 309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-203ENST00000546519 SAFB2Q14151 953 aaKnown RBP eCLIP31.3■■■□□ 2.6
SLC38A1-203ENST00000546519 VPS72Q15906 364 aa31.3■■■□□ 2.6
SLC38A1-203ENST00000546519 LMOD2Q6P5Q4 547 aa31.3■■■□□ 2.6
SLC38A1-203ENST00000546519 TESK2Q96S53 571 aa31.3■■■□□ 2.6
SLC38A1-203ENST00000546519 CCDC9Q9Y3X0 531 aaKnown RBP31.3■■■□□ 2.6
SLC38A1-203ENST00000546519 PRAM1Q96QH2 718 aa31.29■■■□□ 2.6
SLC38A1-203ENST00000546519 POGKQ9P215 609 aa31.29■■■□□ 2.6
SLC38A1-203ENST00000546519 ZNF316A6NFI3 1004 aaPredicted RBP31.27■■■□□ 2.6
SLC38A1-203ENST00000546519 PSME1Q06323 249 aa31.27■■■□□ 2.6
SLC38A1-203ENST00000546519 HIRIP3Q9BW71 556 aaPredicted RBP31.26■■■□□ 2.59
SLC38A1-203ENST00000546519 SF3B2Q13435 895 aaKnown RBP31.25■■■□□ 2.59
SLC38A1-203ENST00000546519 SBNO1A3KN83 1393 aa31.24■■■□□ 2.59
SLC38A1-203ENST00000546519 NRAPQ86VF7 1730 aa31.24■■■□□ 2.59
SLC38A1-203ENST00000546519 PMFBP1Q8TBY8 1022 aa31.23■■■□□ 2.59
SLC38A1-203ENST00000546519 KRT27Q7Z3Y8 459 aa31.22■■■□□ 2.59
SLC38A1-203ENST00000546519 ADGRB2O60241 1585 aa31.22■■■□□ 2.59
SLC38A1-203ENST00000546519 FAM83GA6ND36 823 aa31.21■■■□□ 2.59
SLC38A1-203ENST00000546519 ONECUT3O60422 494 aaPredicted RBP31.21■■■□□ 2.59
SLC38A1-203ENST00000546519 TMF1P82094 1093 aa31.2■■■□□ 2.59
SLC38A1-203ENST00000546519 TRPM3Q9HCF6 1732 aaPredicted RBP31.2■■■□□ 2.58
SLC38A1-203ENST00000546519 ARHGEF10O15013 1369 aa31.19■■■□□ 2.58
SLC38A1-203ENST00000546519 LRP5O75197 1615 aa31.18■■■□□ 2.58
SLC38A1-203ENST00000546519 A0A0G2JS52 829 aa31.18■■■□□ 2.58
SLC38A1-203ENST00000546519 MYT1Q01538 1121 aa31.18■■■□□ 2.58
SLC38A1-203ENST00000546519 PSDA5PKW4 1024 aaPredicted RBP31.16■■■□□ 2.58
SLC38A1-203ENST00000546519 TULP4Q9NRJ4 1543 aa31.15■■■□□ 2.58
SLC38A1-203ENST00000546519 FAM98CQ17RN3 349 aaKnown RBP31.15■■■□□ 2.58
SLC38A1-203ENST00000546519 CDCA8Q53HL2 280 aa31.15■■■□□ 2.58
SLC38A1-203ENST00000546519 ALS2Q96Q42 1657 aa31.14■■■□□ 2.58
SLC38A1-203ENST00000546519 EVC2Q86UK5 1308 aa31.13■■■□□ 2.57
SLC38A1-203ENST00000546519 MINK1Q8N4C8 1332 aaPredicted RBP31.13■■■□□ 2.57
SLC38A1-203ENST00000546519 ANKARQ7Z5J8 1434 aa31.13■■■□□ 2.57
SLC38A1-203ENST00000546519 PUS7Q96PZ0 661 aaKnown RBP31.12■■■□□ 2.57
SLC38A1-203ENST00000546519 BTG4Q9NY30 223 aa31.12■■■□□ 2.57
SLC38A1-203ENST00000546519 COL14A1Q05707 1796 aaKnown RBP31.11■■■□□ 2.57
SLC38A1-203ENST00000546519 CCDC7Q96M83 1385 aa31.11■■■□□ 2.57
SLC38A1-203ENST00000546519 C11orf95C9JLR9 678 aaPredicted RBP31.1■■■□□ 2.57
SLC38A1-203ENST00000546519 FAM182BQ5T319 152 aa31.1■■■□□ 2.57
SLC38A1-203ENST00000546519 KIF7Q2M1P5 1343 aa31.09■■■□□ 2.57
SLC38A1-203ENST00000546519 CRYBG1Q9Y4K1 1723 aa31.09■■■□□ 2.57
SLC38A1-203ENST00000546519 WASHC2AQ641Q2 1341 aa31.08■■■□□ 2.57
SLC38A1-203ENST00000546519 BAG6P46379 1132 aa31.08■■■□□ 2.57
SLC38A1-203ENST00000546519 RGPD1P0DJD0 1748 aa31.07■■■□□ 2.56
SLC38A1-203ENST00000546519 PRR36Q9H6K5 1346 aa31.07■■■□□ 2.56
SLC38A1-203ENST00000546519 WASLO00401 505 aaPredicted RBP31.05■■■□□ 2.56
SLC38A1-203ENST00000546519 EN1Q05925 392 aaPredicted RBP31.04■■■□□ 2.56
SLC38A1-203ENST00000546519 TNS1Q9HBL0 1735 aaKnown RBP31.01■■■□□ 2.56
SLC38A1-203ENST00000546519 THSD7AQ9UPZ6 1657 aa31.01■■■□□ 2.55
SLC38A1-203ENST00000546519 CDK19Q9BWU1 502 aa31.01■■■□□ 2.55
SLC38A1-203ENST00000546519 SPATA31A5Q5VU36 1347 aa30.99■■■□□ 2.55
SLC38A1-203ENST00000546519 SPATA31A7Q8IWB4 1347 aa30.99■■■□□ 2.55
SLC38A1-203ENST00000546519 SRPK2P78362 688 aaKnown RBP30.98■■■□□ 2.55
SLC38A1-203ENST00000546519 PAK3O75914 559 aaPredicted RBP30.96■■■□□ 2.55
SLC38A1-203ENST00000546519 MYOM1P52179 1685 aa30.96■■■□□ 2.55
SLC38A1-203ENST00000546519 NINLQ9Y2I6 1382 aa30.95■■■□□ 2.55
SLC38A1-203ENST00000546519 R3HDM1Q15032 1099 aaKnown RBP30.95■■■□□ 2.55
SLC38A1-203ENST00000546519 CABP2Q9NPB3 220 aa30.95■■■□□ 2.55
SLC38A1-203ENST00000546519 ATP7BP35670 1465 aa30.95■■■□□ 2.54
SLC38A1-203ENST00000546519 NGDNQ8NEJ9 315 aaKnown RBP30.94■■■□□ 2.54
SLC38A1-203ENST00000546519 PRDM11Q9NQV5 511 aa30.93■■■□□ 2.54
SLC38A1-203ENST00000546519 PHRF1Q9P1Y6 1649 aaKnown RBP30.93■■■□□ 2.54
SLC38A1-203ENST00000546519 ITSN1Q15811 1721 aa30.92■■■□□ 2.54
SLC38A1-203ENST00000546519 TOPAZ1Q8N9V7 1692 aa30.91■■■□□ 2.54
SLC38A1-203ENST00000546519 POLR3GLQ9BT43 218 aa30.91■■■□□ 2.54
SLC38A1-203ENST00000546519 CHRNA2Q15822 529 aa30.9■■■□□ 2.54
SLC38A1-203ENST00000546519 EZH2Q15910 746 aaKnown RBP30.9■■■□□ 2.54
SLC38A1-203ENST00000546519 KIAA0232Q92628 1395 aa30.89■■■□□ 2.54
SLC38A1-203ENST00000546519 DISP2A7MBM2 1401 aa30.89■■■□□ 2.53
SLC38A1-203ENST00000546519 NUDT16Q96DE0 195 aaKnown RBP30.88■■■□□ 2.53
SLC38A1-203ENST00000546519 CCDC61Q9Y6R9 512 aa30.87■■■□□ 2.53
SLC38A1-203ENST00000546519 SPATA31A1Q5TZJ5 1347 aa30.87■■■□□ 2.53
SLC38A1-203ENST00000546519 STRN4Q9NRL3 753 aa30.86■■■□□ 2.53
SLC38A1-203ENST00000546519 NUTM2GQ5VZR2 741 aa30.85■■■□□ 2.53
SLC38A1-203ENST00000546519 TRIM37O94972 964 aa30.84■■■□□ 2.53
SLC38A1-203ENST00000546519 ZC3H6P61129 1189 aaKnown RBP30.83■■■□□ 2.53
SLC38A1-203ENST00000546519 PPIP5K1Q6PFW1 1433 aa30.82■■■□□ 2.52
SLC38A1-203ENST00000546519 DDX10Q13206 875 aaKnown RBP30.82■■■□□ 2.52
SLC38A1-203ENST00000546519 CAMKK2Q96RR4 588 aa30.81■■■□□ 2.52
SLC38A1-203ENST00000546519 TMC1Q8TDI8 760 aa30.8■■■□□ 2.52
SLC38A1-203ENST00000546519 USP35Q9P2H5 1018 aa30.8■■■□□ 2.52
SLC38A1-203ENST00000546519 ANKRD36BQ8N2N9 1353 aa30.79■■■□□ 2.52
SLC38A1-203ENST00000546519 PLEKHG3A1L390 1219 aa30.78■■■□□ 2.52
SLC38A1-203ENST00000546519 SLC12A5Q9H2X9 1139 aa30.78■■■□□ 2.52
SLC38A1-203ENST00000546519 FAM196AQ6ZSG2 479 aa30.77■■■□□ 2.52
SLC38A1-203ENST00000546519 CABP1Q9NZU7 370 aa30.77■■■□□ 2.52
SLC38A1-203ENST00000546519 RREB1Q92766 1687 aa30.77■■■□□ 2.52
SLC38A1-203ENST00000546519 APBA3O96018 575 aa30.76■■■□□ 2.51
SLC38A1-203ENST00000546519 CD163L1Q9NR16 1453 aa30.76■■■□□ 2.51
SLC38A1-203ENST00000546519 NRKQ7Z2Y5 1582 aa30.75■■■□□ 2.51
SLC38A1-203ENST00000546519 TERF2IPQ9NYB0 399 aa30.75■■■□□ 2.51
SLC38A1-203ENST00000546519 NUP188Q5SRE5 1749 aa30.75■■■□□ 2.51
SLC38A1-203ENST00000546519 AKAP12Q02952 1782 aa30.74■■■□□ 2.51
SLC38A1-203ENST00000546519 SSH2Q76I76 1423 aa30.74■■■□□ 2.51
SLC38A1-203ENST00000546519 CPSF1Q10570 1443 aaKnown RBP30.73■■■□□ 2.51
SLC38A1-203ENST00000546519 PANK3Q9H999 370 aa30.73■■■□□ 2.51
SLC38A1-203ENST00000546519 CAMTA1Q9Y6Y1 1673 aa30.73■■■□□ 2.51
SLC38A1-203ENST00000546519 POLR3AO14802 1390 aaPredicted RBP30.72■■■□□ 2.51
SLC38A1-203ENST00000546519 ACEP12821 1306 aa30.72■■■□□ 2.51
SLC38A1-203ENST00000546519 A0A1W2PP64 1363 aa30.71■■■□□ 2.51
SLC38A1-203ENST00000546519 HDGFL2Q7Z4V5 671 aaPredicted RBP30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms