RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 TSR2Q969E8 191 aaKnown RBP15.73■□□□□ 0.11
CCDC38-202ENST00000546386 NGDNQ8NEJ9 315 aaKnown RBP15.73■□□□□ 0.11
CCDC38-202ENST00000546386 LAS1LQ9Y4W2 734 aaKnown RBP15.73■□□□□ 0.11
CCDC38-202ENST00000546386 FRAT1Q92837 279 aaPredicted RBP15.71■□□□□ 0.1
CCDC38-202ENST00000546386 RIMS1Q86UR5 1692 aaKnown RBP15.71■□□□□ 0.1
CCDC38-202ENST00000546386 ANKLE2Q86XL3 938 aa15.7■□□□□ 0.1
CCDC38-202ENST00000546386 CRBNQ96SW2 442 aa15.7■□□□□ 0.1
CCDC38-202ENST00000546386 PLEKHG1Q9ULL1 1385 aa15.7■□□□□ 0.1
CCDC38-202ENST00000546386 SLFN5Q08AF3 891 aa15.7■□□□□ 0.1
CCDC38-202ENST00000546386 COG3Q96JB2 828 aa15.7■□□□□ 0.1
CCDC38-202ENST00000546386 PHACTR3Q96KR7 559 aa15.7■□□□□ 0.1
CCDC38-202ENST00000546386 SETD1AO15047 1707 aaKnown RBP15.69■□□□□ 0.1
CCDC38-202ENST00000546386 DIAPH1O60610 1272 aaKnown RBP15.69■□□□□ 0.1
CCDC38-202ENST00000546386 LMOD2Q6P5Q4 547 aa15.69■□□□□ 0.1
CCDC38-202ENST00000546386 RUNDC1Q96C34 613 aa15.69■□□□□ 0.1
CCDC38-202ENST00000546386 TNNQ9UQP3 1299 aa15.69■□□□□ 0.1
CCDC38-202ENST00000546386 POLR3AO14802 1390 aaPredicted RBP15.69■□□□□ 0.1
CCDC38-202ENST00000546386 ZNF521Q96K83 1311 aa15.68■□□□□ 0.1
CCDC38-202ENST00000546386 CPS1P31327 1500 aa15.67■□□□□ 0.1
CCDC38-202ENST00000546386 TCERG1O14776 1098 aaKnown RBP15.67■□□□□ 0.1
CCDC38-202ENST00000546386 PRKAR2BP31323 418 aa15.67■□□□□ 0.1
CCDC38-202ENST00000546386 CLUAP1Q96AJ1 413 aa15.67■□□□□ 0.1
CCDC38-202ENST00000546386 PDE3BQ13370 1112 aa15.67■□□□□ 0.1
CCDC38-202ENST00000546386 DCTN1Q14203 1278 aa15.67■□□□□ 0.1
CCDC38-202ENST00000546386 HSP90AB2PQ58FF8 381 aa15.67■□□□□ 0.1
CCDC38-202ENST00000546386 AEBP1Q8IUX7 1158 aa15.67■□□□□ 0.1
CCDC38-202ENST00000546386 CNKSR2Q8WXI2 1034 aa15.67■□□□□ 0.1
CCDC38-202ENST00000546386 LTV1Q96GA3 475 aaPredicted RBP15.67■□□□□ 0.1
CCDC38-202ENST00000546386 TBX22Q9Y458 520 aa15.67■□□□□ 0.1
CCDC38-202ENST00000546386 NLRP1Q9C000 1473 aa15.67■□□□□ 0.1
CCDC38-202ENST00000546386 ELL2O00472 640 aaPredicted RBP15.66■□□□□ 0.1
CCDC38-202ENST00000546386 PELP1Q8IZL8 1130 aaKnown RBP15.66■□□□□ 0.1
CCDC38-202ENST00000546386 DDX17Q92841 729 aaKnown RBP15.66■□□□□ 0.1
CCDC38-202ENST00000546386 PUS7Q96PZ0 661 aaKnown RBP15.66■□□□□ 0.1
CCDC38-202ENST00000546386 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.66■□□□□ 0.1
CCDC38-202ENST00000546386 FAM83GA6ND36 823 aa15.65■□□□□ 0.1
CCDC38-202ENST00000546386 RIPK4P57078 832 aa15.65■□□□□ 0.1
CCDC38-202ENST00000546386 ESCO1Q5FWF5 840 aa15.65■□□□□ 0.1
CCDC38-202ENST00000546386 TTC21BQ7Z4L5 1316 aa15.64■□□□□ 0.09
CCDC38-202ENST00000546386 MAPK8IP3Q9UPT6 1336 aa15.64■□□□□ 0.09
CCDC38-202ENST00000546386 ORAI2Q96SN7 254 aa15.63■□□□□ 0.09
CCDC38-202ENST00000546386 RNF123Q5XPI4 1314 aa15.63■□□□□ 0.09
CCDC38-202ENST00000546386 FOXO3O43524 673 aa15.63■□□□□ 0.09
CCDC38-202ENST00000546386 NLRP6P59044 892 aa15.63■□□□□ 0.09
CCDC38-202ENST00000546386 PANK1Q8TE04 598 aa15.62■□□□□ 0.09
CCDC38-202ENST00000546386 ATP7BP35670 1465 aa15.62■□□□□ 0.09
CCDC38-202ENST00000546386 TMPOP42166 694 aaKnown RBP15.62■□□□□ 0.09
CCDC38-202ENST00000546386 PLEKHF1Q96S99 279 aa15.62■□□□□ 0.09
CCDC38-202ENST00000546386 CANXP27824 592 aaKnown RBP15.61■□□□□ 0.09
CCDC38-202ENST00000546386 NKTRP30414 1462 aaKnown RBP15.61■□□□□ 0.09
CCDC38-202ENST00000546386 CPSF1Q10570 1443 aaKnown RBP15.6■□□□□ 0.09
CCDC38-202ENST00000546386 ABTB2Q8N961 1025 aa15.6■□□□□ 0.09
CCDC38-202ENST00000546386 TRIM35Q9UPQ4 493 aa15.6■□□□□ 0.09
CCDC38-202ENST00000546386 SHPRHQ149N8 1683 aa15.6■□□□□ 0.09
CCDC38-202ENST00000546386 NINLQ9Y2I6 1382 aa15.59■□□□□ 0.09
CCDC38-202ENST00000546386 E9PSI1 815 aa15.59■□□□□ 0.09
CCDC38-202ENST00000546386 SULT6B1Q6IMI4 303 aa15.59■□□□□ 0.09
CCDC38-202ENST00000546386 FAM135BQ49AJ0 1406 aa15.59■□□□□ 0.09
CCDC38-202ENST00000546386 MAPK8IP2Q13387 824 aaPredicted RBP15.59■□□□□ 0.09
CCDC38-202ENST00000546386 RGPD8O14715 1765 aaPredicted RBP15.59■□□□□ 0.09
CCDC38-202ENST00000546386 BCL11AQ9H165 835 aa15.58■□□□□ 0.09
CCDC38-202ENST00000546386 COG6Q9Y2V7 657 aa15.58■□□□□ 0.09
CCDC38-202ENST00000546386 RBM19Q9Y4C8 960 aaKnown RBP15.58■□□□□ 0.09
CCDC38-202ENST00000546386 CEP170BQ9Y4F5 1589 aaPredicted RBP15.58■□□□□ 0.08
CCDC38-202ENST00000546386 DLC1Q96QB1 1528 aa15.58■□□□□ 0.08
CCDC38-202ENST00000546386 USHBP1Q8N6Y0 703 aa15.58■□□□□ 0.08
CCDC38-202ENST00000546386 NSD2O96028 1365 aa15.57■□□□□ 0.08
CCDC38-202ENST00000546386 EXOSC9Q06265 439 aaKnown RBP15.57■□□□□ 0.08
CCDC38-202ENST00000546386 ZNF692Q9BU19 519 aaPredicted RBP15.57■□□□□ 0.08
CCDC38-202ENST00000546386 MAP2P11137 1827 aaKnown RBP15.57■□□□□ 0.08
CCDC38-202ENST00000546386 EDC4Q6P2E9 1401 aaKnown RBP15.57■□□□□ 0.08
CCDC38-202ENST00000546386 IL13P35225 146 aa15.57■□□□□ 0.08
CCDC38-202ENST00000546386 PROSER2Q86WR7 435 aaPredicted RBP15.57■□□□□ 0.08
CCDC38-202ENST00000546386 MIS18AQ9NYP9 233 aa15.57■□□□□ 0.08
CCDC38-202ENST00000546386 SETD1BQ9UPS6 1966 aaKnown RBP15.57■□□□□ 0.08
CCDC38-202ENST00000546386 MED14O60244 1454 aa15.57■□□□□ 0.08
CCDC38-202ENST00000546386 TECPR2O15040 1411 aa15.56■□□□□ 0.08
CCDC38-202ENST00000546386 EIF4A2Q14240 407 aaKnown RBP15.56■□□□□ 0.08
CCDC38-202ENST00000546386 RSPH6AQ9H0K4 717 aa15.56■□□□□ 0.08
CCDC38-202ENST00000546386 ARHGAP23Q9P227 1491 aa15.56■□□□□ 0.08
CCDC38-202ENST00000546386 TRMT2AQ8IZ69 625 aaKnown RBP15.55■□□□□ 0.08
CCDC38-202ENST00000546386 SLIT1O75093 1534 aa15.55■□□□□ 0.08
CCDC38-202ENST00000546386 AMPHP49418 695 aa15.55■□□□□ 0.08
CCDC38-202ENST00000546386 PSME1Q06323 249 aa15.55■□□□□ 0.08
CCDC38-202ENST00000546386 SIRT1Q96EB6 747 aa15.55■□□□□ 0.08
CCDC38-202ENST00000546386 PLEKHG3A1L390 1219 aa15.54■□□□□ 0.08
CCDC38-202ENST00000546386 RLBP1P12271 317 aa15.54■□□□□ 0.08
CCDC38-202ENST00000546386 MCM10Q7L590 875 aa15.54■□□□□ 0.08
CCDC38-202ENST00000546386 MAP3K19Q56UN5 1328 aa15.54■□□□□ 0.08
CCDC38-202ENST00000546386 KRT24Q2M2I5 525 aa15.54■□□□□ 0.08
CCDC38-202ENST00000546386 FANCIQ9NVI1 1328 aa15.53■□□□□ 0.08
CCDC38-202ENST00000546386 USP6P35125 1406 aa15.52■□□□□ 0.08
CCDC38-202ENST00000546386 PHF8Q9UPP1 1060 aa15.52■□□□□ 0.08
CCDC38-202ENST00000546386 TSPYL6Q8N831 410 aa15.52■□□□□ 0.07
CCDC38-202ENST00000546386 INSRP06213 1382 aa15.51■□□□□ 0.07
CCDC38-202ENST00000546386 NEFMP07197 916 aa15.51■□□□□ 0.07
CCDC38-202ENST00000546386 RARSP54136 660 aaKnown RBP15.51■□□□□ 0.07
CCDC38-202ENST00000546386 COL3A1P02461 1466 aaPredicted RBP15.51■□□□□ 0.07
CCDC38-202ENST00000546386 FCHSD2O94868 740 aa15.5■□□□□ 0.07
CCDC38-202ENST00000546386 CDC42BPGQ6DT37 1551 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms