RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 EPAS1Q99814 870 aa10.95□□□□□ -0.66
CCDC60-205ENST00000546345 FAM205CA6NFA0 338 aa10.94□□□□□ -0.66
CCDC60-205ENST00000546345 THEMISQ8N1K5 641 aaPredicted RBP10.94□□□□□ -0.66
CCDC60-205ENST00000546345 PCDHGA10Q9Y5H3 936 aa10.94□□□□□ -0.66
CCDC60-205ENST00000546345 MYO5BQ9ULV0 1848 aa10.93□□□□□ -0.66
CCDC60-205ENST00000546345 PPP4R3BQ5MIZ7 849 aa10.93□□□□□ -0.66
CCDC60-205ENST00000546345 TYW1BQ6NUM6 668 aa10.93□□□□□ -0.66
CCDC60-205ENST00000546345 DIP2AQ14689 1571 aa10.93□□□□□ -0.66
CCDC60-205ENST00000546345 CHD2O14647 1828 aaKnown RBP10.93□□□□□ -0.66
CCDC60-205ENST00000546345 CCDC141Q6ZP82 1450 aa10.93□□□□□ -0.66
CCDC60-205ENST00000546345 TET3O43151 1660 aa10.92□□□□□ -0.66
CCDC60-205ENST00000546345 VARS2Q5ST30 1063 aaKnown RBP10.92□□□□□ -0.66
CCDC60-205ENST00000546345 PRDM15P57071 1507 aaPredicted RBP10.92□□□□□ -0.66
CCDC60-205ENST00000546345 CDK12Q9NYV4 1490 aaPredicted RBP10.92□□□□□ -0.66
CCDC60-205ENST00000546345 AHDC1Q5TGY3 1603 aaPredicted RBP10.91□□□□□ -0.66
CCDC60-205ENST00000546345 ARHGEF5Q12774 1597 aa10.91□□□□□ -0.66
CCDC60-205ENST00000546345 ZNF644Q9H582 1327 aaPredicted RBP10.91□□□□□ -0.66
CCDC60-205ENST00000546345 EHBP1L1Q8N3D4 1523 aa10.91□□□□□ -0.66
CCDC60-205ENST00000546345 OSBPP22059 807 aa10.91□□□□□ -0.66
CCDC60-205ENST00000546345 FBXW7Q969H0 707 aa10.91□□□□□ -0.66
CCDC60-205ENST00000546345 ZDHHC16Q969W1 377 aa10.91□□□□□ -0.66
CCDC60-205ENST00000546345 NKTRP30414 1462 aaKnown RBP10.91□□□□□ -0.66
CCDC60-205ENST00000546345 TMEM94Q12767 1356 aa10.9□□□□□ -0.66
CCDC60-205ENST00000546345 MAST1Q9Y2H9 1570 aa10.9□□□□□ -0.66
CCDC60-205ENST00000546345 CCNB3Q8WWL7 1395 aa10.9□□□□□ -0.67
CCDC60-205ENST00000546345 KIF3BO15066 747 aa10.89□□□□□ -0.67
CCDC60-205ENST00000546345 HS3ST6Q96QI5 342 aa10.89□□□□□ -0.67
CCDC60-205ENST00000546345 SETBP1Q9Y6X0 1596 aa10.89□□□□□ -0.67
CCDC60-205ENST00000546345 JCADQ9P266 1359 aa10.89□□□□□ -0.67
CCDC60-205ENST00000546345 LTKP29376 864 aa10.88□□□□□ -0.67
CCDC60-205ENST00000546345 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.88□□□□□ -0.67
CCDC60-205ENST00000546345 RBM33Q96EV2 1170 aaKnown RBP10.88□□□□□ -0.67
CCDC60-205ENST00000546345 PLSCR2Q9NRY7 297 aa10.88□□□□□ -0.67
CCDC60-205ENST00000546345 CFDP1Q9UEE9 299 aaPredicted RBP10.88□□□□□ -0.67
CCDC60-205ENST00000546345 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.87□□□□□ -0.67
CCDC60-205ENST00000546345 RGS12O14924 1447 aa10.87□□□□□ -0.67
CCDC60-205ENST00000546345 WASHC2CQ9Y4E1 1318 aa10.86□□□□□ -0.67
CCDC60-205ENST00000546345 FGD6Q6ZV73 1430 aa10.86□□□□□ -0.67
CCDC60-205ENST00000546345 EN1Q05925 392 aaPredicted RBP10.86□□□□□ -0.67
CCDC60-205ENST00000546345 ADAM33Q9BZ11 813 aa10.86□□□□□ -0.67
CCDC60-205ENST00000546345 NHSL1Q5SYE7 1610 aa10.86□□□□□ -0.67
CCDC60-205ENST00000546345 EP400Q96L91 3159 aa10.86□□□□□ -0.67
CCDC60-205ENST00000546345 MAP3K7O43318 606 aa10.85□□□□□ -0.67
CCDC60-205ENST00000546345 ZNF687Q8N1G0 1237 aa10.85□□□□□ -0.67
CCDC60-205ENST00000546345 TRIM52Q96A61 297 aa10.85□□□□□ -0.67
CCDC60-205ENST00000546345 CROCC2H7BZ55 1655 aa10.85□□□□□ -0.67
CCDC60-205ENST00000546345 EFCAB6Q5THR3 1501 aa10.84□□□□□ -0.67
CCDC60-205ENST00000546345 POTEB3A0JP26 581 aa10.84□□□□□ -0.67
CCDC60-205ENST00000546345 UBTFP17480 764 aaKnown RBP10.84□□□□□ -0.67
CCDC60-205ENST00000546345 PRIM1P49642 420 aaKnown RBP10.84□□□□□ -0.67
CCDC60-205ENST00000546345 RBM26Q5T8P6 1007 aaKnown RBP10.84□□□□□ -0.67
CCDC60-205ENST00000546345 POTEBQ6S5H4 581 aa10.84□□□□□ -0.67
CCDC60-205ENST00000546345 BCL2L12Q9HB09 334 aa10.84□□□□□ -0.67
CCDC60-205ENST00000546345 C6orf132Q5T0Z8 1188 aa10.83□□□□□ -0.68
CCDC60-205ENST00000546345 LMOD2Q6P5Q4 547 aa10.83□□□□□ -0.68
CCDC60-205ENST00000546345 ADGRB3O60242 1522 aa10.83□□□□□ -0.68
CCDC60-205ENST00000546345 CEP162Q5TB80 1403 aa10.83□□□□□ -0.68
CCDC60-205ENST00000546345 GCC2Q8IWJ2 1684 aa10.82□□□□□ -0.68
CCDC60-205ENST00000546345 POTEMA6NI47 508 aa10.82□□□□□ -0.68
CCDC60-205ENST00000546345 PTPREP23469 700 aa10.82□□□□□ -0.68
CCDC60-205ENST00000546345 POTEGQ6S5H5 508 aa10.82□□□□□ -0.68
CCDC60-205ENST00000546345 LRP5O75197 1615 aa10.82□□□□□ -0.68
CCDC60-205ENST00000546345 TMEM2Q9UHN6 1383 aa10.81□□□□□ -0.68
CCDC60-205ENST00000546345 NUTM2FA1L443 756 aa10.81□□□□□ -0.68
CCDC60-205ENST00000546345 MTUS2Q5JR59 1369 aa10.8□□□□□ -0.68
CCDC60-205ENST00000546345 ARHGAP31Q2M1Z3 1444 aa10.8□□□□□ -0.68
CCDC60-205ENST00000546345 SPATA31A6Q5VVP1 1343 aa10.8□□□□□ -0.68
CCDC60-205ENST00000546345 TSR1Q2NL82 804 aaKnown RBP10.79□□□□□ -0.68
CCDC60-205ENST00000546345 MSH6P52701 1360 aa10.78□□□□□ -0.68
CCDC60-205ENST00000546345 ARHGAP33O14559 1287 aa10.78□□□□□ -0.68
CCDC60-205ENST00000546345 PBX2P40425 430 aa10.78□□□□□ -0.68
CCDC60-205ENST00000546345 ZNF772Q68DY9 489 aaPredicted RBP10.78□□□□□ -0.68
CCDC60-205ENST00000546345 TXNDC2Q86VQ3 553 aa10.78□□□□□ -0.68
CCDC60-205ENST00000546345 GPIHBP1Q8IV16 184 aa10.78□□□□□ -0.68
CCDC60-205ENST00000546345 KCNA6P17658 529 aa10.77□□□□□ -0.69
CCDC60-205ENST00000546345 KCNK17Q96T54 332 aa10.77□□□□□ -0.69
CCDC60-205ENST00000546345 POTEEQ6S8J3 1075 aa10.76□□□□□ -0.69
CCDC60-205ENST00000546345 AXIN2Q9Y2T1 843 aa10.76□□□□□ -0.69
CCDC60-205ENST00000546345 MARF1Q9Y4F3 1742 aaKnown RBP10.75□□□□□ -0.69
CCDC60-205ENST00000546345 ASXL1Q8IXJ9 1541 aa10.75□□□□□ -0.69
CCDC60-205ENST00000546345 DUOX2Q9NRD8 1548 aa10.75□□□□□ -0.69
CCDC60-205ENST00000546345 PSEN2P49810 448 aa10.75□□□□□ -0.69
CCDC60-205ENST00000546345 CDHR5Q9HBB8 845 aa10.75□□□□□ -0.69
CCDC60-205ENST00000546345 XRN1Q8IZH2 1706 aaKnown RBP10.75□□□□□ -0.69
CCDC60-205ENST00000546345 FCHSD2O94868 740 aa10.74□□□□□ -0.69
CCDC60-205ENST00000546345 RXRBP28702 533 aa10.74□□□□□ -0.69
CCDC60-205ENST00000546345 SLAIN2Q9P270 581 aa10.74□□□□□ -0.69
CCDC60-205ENST00000546345 ZFYVE9O95405 1425 aa10.74□□□□□ -0.69
CCDC60-205ENST00000546345 LMTK2Q8IWU2 1503 aa10.74□□□□□ -0.69
CCDC60-205ENST00000546345 TMEM131LA2VDJ0 1609 aa10.73□□□□□ -0.69
CCDC60-205ENST00000546345 LAMC1P11047 1609 aa10.73□□□□□ -0.69
CCDC60-205ENST00000546345 NALCNQ8IZF0 1738 aa10.73□□□□□ -0.69
CCDC60-205ENST00000546345 BRWD3Q6RI45 1802 aa10.73□□□□□ -0.69
CCDC60-205ENST00000546345 PPP1R3GB7ZBB8 358 aa10.73□□□□□ -0.69
CCDC60-205ENST00000546345 PTGDRQ13258 359 aa10.73□□□□□ -0.69
CCDC60-205ENST00000546345 PROSER2Q86WR7 435 aaPredicted RBP10.73□□□□□ -0.69
CCDC60-205ENST00000546345 SLC26A8Q96RN1 970 aa10.73□□□□□ -0.69
CCDC60-205ENST00000546345 NPDC1Q9NQX5 325 aaPredicted RBP10.73□□□□□ -0.69
CCDC60-205ENST00000546345 AFF2P51816 1311 aa10.73□□□□□ -0.69
CCDC60-205ENST00000546345 COL9A1P20849 921 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms