RNA–Protein interactions for RNA: ENST00000546318.2

IFIT1-202, Transcript of interferon induced protein with tetratricopeptide repeats 1, humanhuman

TSL 3 BASIC

Gene IFIT1, Length 4,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFIT1-202ENST00000546318 AAMPQ13685 434 aa8.49□□□□□ -1.05
IFIT1-202ENST00000546318 PDE3AQ14432 1141 aa8.49□□□□□ -1.05
IFIT1-202ENST00000546318 RRP7AQ9Y3A4 280 aaKnown RBP8.49□□□□□ -1.05
IFIT1-202ENST00000546318 AKAP12Q02952 1782 aa8.49□□□□□ -1.05
IFIT1-202ENST00000546318 CT47B1P0C2W7 299 aaPredicted RBP8.48□□□□□ -1.05
IFIT1-202ENST00000546318 DIP2AQ14689 1571 aa8.48□□□□□ -1.05
IFIT1-202ENST00000546318 WAPLQ7Z5K2 1190 aa8.48□□□□□ -1.05
IFIT1-202ENST00000546318 PHF23Q9BUL5 403 aaPredicted RBP8.48□□□□□ -1.05
IFIT1-202ENST00000546318 C20orf194Q5TEA3 1177 aa8.48□□□□□ -1.05
IFIT1-202ENST00000546318 SPINK5Q9NQ38 1064 aaPredicted RBP8.48□□□□□ -1.05
IFIT1-202ENST00000546318 CPSF1Q10570 1443 aaKnown RBP8.48□□□□□ -1.05
IFIT1-202ENST00000546318 PNPLA6Q8IY17 1366 aa8.47□□□□□ -1.05
IFIT1-202ENST00000546318 KDM2BQ8NHM5 1336 aa8.47□□□□□ -1.05
IFIT1-202ENST00000546318 EID1Q9Y6B2 187 aa8.47□□□□□ -1.05
IFIT1-202ENST00000546318 C3P01024 1663 aa8.47□□□□□ -1.05
IFIT1-202ENST00000546318 CDK12Q9NYV4 1490 aaPredicted RBP8.47□□□□□ -1.05
IFIT1-202ENST00000546318 TOPAZ1Q8N9V7 1692 aa8.47□□□□□ -1.05
IFIT1-202ENST00000546318 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.47□□□□□ -1.05
IFIT1-202ENST00000546318 IL16Q14005 1332 aa8.46□□□□□ -1.05
IFIT1-202ENST00000546318 TXNDC2Q86VQ3 553 aa8.46□□□□□ -1.05
IFIT1-202ENST00000546318 SLIT1O75093 1534 aa8.46□□□□□ -1.05
IFIT1-202ENST00000546318 BCAR3O75815 825 aa8.46□□□□□ -1.06
IFIT1-202ENST00000546318 DMRT2Q9Y5R5 561 aa8.46□□□□□ -1.06
IFIT1-202ENST00000546318 AATKQ6ZMQ8 1374 aa8.46□□□□□ -1.06
IFIT1-202ENST00000546318 NUDT16Q96DE0 195 aaKnown RBP8.45□□□□□ -1.06
IFIT1-202ENST00000546318 PLEKHF1Q96S99 279 aa8.45□□□□□ -1.06
IFIT1-202ENST00000546318 ZNF692Q9BU19 519 aaPredicted RBP8.45□□□□□ -1.06
IFIT1-202ENST00000546318 LRRC7Q96NW7 1537 aa8.45□□□□□ -1.06
IFIT1-202ENST00000546318 ADAMTS13Q76LX8 1427 aa8.45□□□□□ -1.06
IFIT1-202ENST00000546318 COG3Q96JB2 828 aa8.45□□□□□ -1.06
IFIT1-202ENST00000546318 FCHSD2O94868 740 aa8.45□□□□□ -1.06
IFIT1-202ENST00000546318 NRKQ7Z2Y5 1582 aa8.44□□□□□ -1.06
IFIT1-202ENST00000546318 TMPOP42166 694 aaKnown RBP8.44□□□□□ -1.06
IFIT1-202ENST00000546318 RARSP54136 660 aaKnown RBP8.44□□□□□ -1.06
IFIT1-202ENST00000546318 PDE4AP27815 886 aa8.44□□□□□ -1.06
IFIT1-202ENST00000546318 CALD1Q05682 793 aaKnown RBP8.44□□□□□ -1.06
IFIT1-202ENST00000546318 NOP58Q9Y2X3 529 aaKnown RBP8.44□□□□□ -1.06
IFIT1-202ENST00000546318 CCDC61Q9Y6R9 512 aa8.44□□□□□ -1.06
IFIT1-202ENST00000546318 MSH5O43196 834 aa8.44□□□□□ -1.06
IFIT1-202ENST00000546318 PTCH1Q13635 1447 aa8.44□□□□□ -1.06
IFIT1-202ENST00000546318 RIMS1Q86UR5 1692 aaKnown RBP8.44□□□□□ -1.06
IFIT1-202ENST00000546318 FRAT1Q92837 279 aaPredicted RBP8.44□□□□□ -1.06
IFIT1-202ENST00000546318 ARHGAP23Q9P227 1491 aa8.44□□□□□ -1.06
IFIT1-202ENST00000546318 CLUAP1Q96AJ1 413 aa8.43□□□□□ -1.06
IFIT1-202ENST00000546318 IPO9Q96P70 1041 aaKnown RBP8.43□□□□□ -1.06
IFIT1-202ENST00000546318 MAP2P11137 1827 aaKnown RBP8.43□□□□□ -1.06
IFIT1-202ENST00000546318 ROBO2Q9HCK4 1378 aa8.43□□□□□ -1.06
IFIT1-202ENST00000546318 PMFBP1Q8TBY8 1022 aa8.43□□□□□ -1.06
IFIT1-202ENST00000546318 PPM1GO15355 546 aaPredicted RBP8.42□□□□□ -1.06
IFIT1-202ENST00000546318 RIPK4P57078 832 aa8.42□□□□□ -1.06
IFIT1-202ENST00000546318 BACH2Q9BYV9 841 aa8.42□□□□□ -1.06
IFIT1-202ENST00000546318 POLKQ9UBT6 870 aa8.42□□□□□ -1.06
IFIT1-202ENST00000546318 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.42□□□□□ -1.06
IFIT1-202ENST00000546318 LMOD3Q0VAK6 560 aa8.42□□□□□ -1.06
IFIT1-202ENST00000546318 FTSJ3Q8IY81 847 aaKnown RBP8.42□□□□□ -1.06
IFIT1-202ENST00000546318 ZKSCAN2Q63HK3 967 aa8.41□□□□□ -1.06
IFIT1-202ENST00000546318 DDRGK1Q96HY6 314 aa8.41□□□□□ -1.06
IFIT1-202ENST00000546318 NME9Q86XW9 330 aa8.41□□□□□ -1.06
IFIT1-202ENST00000546318 THEMISQ8N1K5 641 aaPredicted RBP8.41□□□□□ -1.06
IFIT1-202ENST00000546318 RSPH6AQ9H0K4 717 aa8.41□□□□□ -1.06
IFIT1-202ENST00000546318 PANK1Q8TE04 598 aa8.41□□□□□ -1.06
IFIT1-202ENST00000546318 COG6Q9Y2V7 657 aa8.41□□□□□ -1.06
IFIT1-202ENST00000546318 NALCNQ8IZF0 1738 aa8.4□□□□□ -1.06
IFIT1-202ENST00000546318 PRKAR2BP31323 418 aa8.4□□□□□ -1.06
IFIT1-202ENST00000546318 SMC4Q9NTJ3 1288 aa8.4□□□□□ -1.06
IFIT1-202ENST00000546318 ZBTB47Q9UFB7 747 aaPredicted RBP8.4□□□□□ -1.06
IFIT1-202ENST00000546318 TRIM35Q9UPQ4 493 aa8.4□□□□□ -1.06
IFIT1-202ENST00000546318 KIF16BQ96L93 1317 aa8.4□□□□□ -1.06
IFIT1-202ENST00000546318 XRN1Q8IZH2 1706 aaKnown RBP8.39□□□□□ -1.07
IFIT1-202ENST00000546318 NFE2L2Q16236 605 aa8.39□□□□□ -1.07
IFIT1-202ENST00000546318 FAM161AQ3B820 660 aa8.39□□□□□ -1.07
IFIT1-202ENST00000546318 CEP170BQ9Y4F5 1589 aaPredicted RBP8.39□□□□□ -1.07
IFIT1-202ENST00000546318 IPO8O15397 1037 aaKnown RBP8.39□□□□□ -1.07
IFIT1-202ENST00000546318 NPM2Q86SE8 214 aaKnown RBP8.39□□□□□ -1.07
IFIT1-202ENST00000546318 ZNF428Q96B54 188 aa8.39□□□□□ -1.07
IFIT1-202ENST00000546318 USP6P35125 1406 aa8.39□□□□□ -1.07
IFIT1-202ENST00000546318 LTKP29376 864 aa8.39□□□□□ -1.07
IFIT1-202ENST00000546318 TSR2Q969E8 191 aaKnown RBP8.39□□□□□ -1.07
IFIT1-202ENST00000546318 EMILIN1Q9Y6C2 1016 aa8.39□□□□□ -1.07
IFIT1-202ENST00000546318 PTPRUQ92729 1446 aa8.39□□□□□ -1.07
IFIT1-202ENST00000546318 EXOSC9Q06265 439 aaKnown RBP8.39□□□□□ -1.07
IFIT1-202ENST00000546318 DZIP1LQ8IYY4 767 aaKnown RBP8.39□□□□□ -1.07
IFIT1-202ENST00000546318 TBX22Q9Y458 520 aa8.39□□□□□ -1.07
IFIT1-202ENST00000546318 VIRMAQ69YN4 1812 aaKnown RBP8.39□□□□□ -1.07
IFIT1-202ENST00000546318 PRR36Q9H6K5 1346 aa8.39□□□□□ -1.07
IFIT1-202ENST00000546318 IL13P35225 146 aa8.38□□□□□ -1.07
IFIT1-202ENST00000546318 MVPQ14764 893 aaKnown RBP8.38□□□□□ -1.07
IFIT1-202ENST00000546318 TTC21AQ8NDW8 1320 aa8.38□□□□□ -1.07
IFIT1-202ENST00000546318 OVOS2A0A0J9YW53 1432 aa8.38□□□□□ -1.07
IFIT1-202ENST00000546318 OVOS2Q6IE36 1432 aa8.38□□□□□ -1.07
IFIT1-202ENST00000546318 PLEKHG3A1L390 1219 aa8.38□□□□□ -1.07
IFIT1-202ENST00000546318 ALDH1L2Q3SY69 923 aa8.38□□□□□ -1.07
IFIT1-202ENST00000546318 RWDD1Q9H446 243 aaPredicted RBP8.38□□□□□ -1.07
IFIT1-202ENST00000546318 ANKARQ7Z5J8 1434 aa8.38□□□□□ -1.07
IFIT1-202ENST00000546318 CEBPAP49715 358 aaPredicted RBP8.38□□□□□ -1.07
IFIT1-202ENST00000546318 BCL2L13Q9BXK5 485 aa8.38□□□□□ -1.07
IFIT1-202ENST00000546318 TTC21BQ7Z4L5 1316 aa8.38□□□□□ -1.07
IFIT1-202ENST00000546318 ZNF142P52746 1687 aaPredicted RBP8.38□□□□□ -1.07
IFIT1-202ENST00000546318 PIK3R4Q99570 1358 aa8.38□□□□□ -1.07
IFIT1-202ENST00000546318 IFT57Q9NWB7 429 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms