RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 NOB1Q9ULX3 412 aaKnown RBP17.79■□□□□ 0.44
SRP54-202ENST00000546080 NSD2O96028 1365 aa17.78■□□□□ 0.44
SRP54-202ENST00000546080 TMEM57Q8N5G2 664 aa17.78■□□□□ 0.44
SRP54-202ENST00000546080 EFCAB6Q5THR3 1501 aa17.78■□□□□ 0.44
SRP54-202ENST00000546080 NUCB1Q02818 461 aa17.77■□□□□ 0.44
SRP54-202ENST00000546080 ARAP3Q8WWN8 1544 aa17.77■□□□□ 0.44
SRP54-202ENST00000546080 GAS2L3Q86XJ1 694 aa17.77■□□□□ 0.43
SRP54-202ENST00000546080 PKNOX2Q96KN3 472 aa17.77■□□□□ 0.43
SRP54-202ENST00000546080 ZBTB40Q9NUA8 1239 aa17.77■□□□□ 0.43
SRP54-202ENST00000546080 MROH1Q8NDA8 1641 aa17.77■□□□□ 0.43
SRP54-202ENST00000546080 ABCC11Q96J66 1382 aa17.76■□□□□ 0.43
SRP54-202ENST00000546080 LNPKQ9C0E8 428 aa17.76■□□□□ 0.43
SRP54-202ENST00000546080 VSIG10Q8N0Z9 540 aa17.76■□□□□ 0.43
SRP54-202ENST00000546080 KIF16BQ96L93 1317 aa17.75■□□□□ 0.43
SRP54-202ENST00000546080 ADGRB3O60242 1522 aa17.75■□□□□ 0.43
SRP54-202ENST00000546080 CHGAP10645 457 aaKnown RBP17.75■□□□□ 0.43
SRP54-202ENST00000546080 TMPOP42166 694 aaKnown RBP17.74■□□□□ 0.43
SRP54-202ENST00000546080 CD109Q6YHK3 1445 aa17.74■□□□□ 0.43
SRP54-202ENST00000546080 ANKRD36BQ8N2N9 1353 aa17.74■□□□□ 0.43
SRP54-202ENST00000546080 U2SURPO15042 1029 aaKnown RBP17.74■□□□□ 0.43
SRP54-202ENST00000546080 IPO8O15397 1037 aaKnown RBP17.74■□□□□ 0.43
SRP54-202ENST00000546080 CHD1LQ86WJ1 897 aa17.74■□□□□ 0.43
SRP54-202ENST00000546080 CFAP74Q9C0B2 1584 aa17.73■□□□□ 0.43
SRP54-202ENST00000546080 TPM2P07951 284 aa17.73■□□□□ 0.43
SRP54-202ENST00000546080 BMP2KLQ5H9B9 411 aa17.73■□□□□ 0.43
SRP54-202ENST00000546080 PLEKHF1Q96S99 279 aa17.73■□□□□ 0.43
SRP54-202ENST00000546080 C14orf93Q9H972 538 aaKnown RBP17.73■□□□□ 0.43
SRP54-202ENST00000546080 TRIM35Q9UPQ4 493 aa17.73■□□□□ 0.43
SRP54-202ENST00000546080 ADGRB1O14514 1584 aa17.72■□□□□ 0.43
SRP54-202ENST00000546080 PPRC1Q5VV67 1664 aaKnown RBP17.72■□□□□ 0.43
SRP54-202ENST00000546080 IL16Q14005 1332 aa17.72■□□□□ 0.43
SRP54-202ENST00000546080 CCDC173Q0VFZ6 552 aa17.72■□□□□ 0.43
SRP54-202ENST00000546080 FOXD4L1Q9NU39 408 aa17.72■□□□□ 0.43
SRP54-202ENST00000546080 FANCAO15360 1455 aa17.72■□□□□ 0.43
SRP54-202ENST00000546080 GOLGA6L22H0YM25 854 aa17.71■□□□□ 0.43
SRP54-202ENST00000546080 K7ELQ4 463 aaPredicted RBP17.71■□□□□ 0.43
SRP54-202ENST00000546080 TMEM132EQ6IEE7 984 aa17.71■□□□□ 0.43
SRP54-202ENST00000546080 EVC2Q86UK5 1308 aa17.71■□□□□ 0.43
SRP54-202ENST00000546080 UHRF1BP1LA0JNW5 1464 aa17.7■□□□□ 0.42
SRP54-202ENST00000546080 KIF2CQ99661 725 aa17.7■□□□□ 0.42
SRP54-202ENST00000546080 ANP32BQ92688 251 aaKnown RBP17.69■□□□□ 0.42
SRP54-202ENST00000546080 PPLO60437 1756 aa17.69■□□□□ 0.42
SRP54-202ENST00000546080 CD2BP2O95400 341 aaKnown RBP17.69■□□□□ 0.42
SRP54-202ENST00000546080 NASPP49321 788 aaPredicted RBP17.69■□□□□ 0.42
SRP54-202ENST00000546080 PUS7Q96PZ0 661 aaKnown RBP17.69■□□□□ 0.42
SRP54-202ENST00000546080 ZMYND15Q9H091 742 aa17.69■□□□□ 0.42
SRP54-202ENST00000546080 ALDH1L2Q3SY69 923 aa17.67■□□□□ 0.42
SRP54-202ENST00000546080 ANKRD45Q5TZF3 282 aa17.67■□□□□ 0.42
SRP54-202ENST00000546080 TULP4Q9NRJ4 1543 aa17.67■□□□□ 0.42
SRP54-202ENST00000546080 SSFA2P28290 1259 aa17.67■□□□□ 0.42
SRP54-202ENST00000546080 RIPK4P57078 832 aa17.67■□□□□ 0.42
SRP54-202ENST00000546080 PPP1R9BQ96SB3 815 aa17.67■□□□□ 0.42
SRP54-202ENST00000546080 ABCA9Q8IUA7 1624 aa17.67■□□□□ 0.42
SRP54-202ENST00000546080 LMTK2Q8IWU2 1503 aa17.66■□□□□ 0.42
SRP54-202ENST00000546080 GCC1Q96CN9 775 aa17.66■□□□□ 0.42
SRP54-202ENST00000546080 COL3A1P02461 1466 aaPredicted RBP17.66■□□□□ 0.42
SRP54-202ENST00000546080 TBC1D9Q6ZT07 1266 aa17.66■□□□□ 0.42
SRP54-202ENST00000546080 IBTKQ9P2D0 1353 aaPredicted RBP17.66■□□□□ 0.42
SRP54-202ENST00000546080 GLI2P10070 1586 aa17.65■□□□□ 0.42
SRP54-202ENST00000546080 DDX49Q9Y6V7 483 aaKnown RBP17.65■□□□□ 0.42
SRP54-202ENST00000546080 MED14O60244 1454 aa17.65■□□□□ 0.42
SRP54-202ENST00000546080 KLHL40Q2TBA0 621 aa17.64■□□□□ 0.42
SRP54-202ENST00000546080 ZSCAN30Q86W11 494 aa17.64■□□□□ 0.42
SRP54-202ENST00000546080 GAS2L2Q8NHY3 880 aa17.64■□□□□ 0.42
SRP54-202ENST00000546080 KIAA1211Q6ZU35 1233 aa17.64■□□□□ 0.41
SRP54-202ENST00000546080 RBM42Q9BTD8 480 aaKnown RBP17.64■□□□□ 0.41
SRP54-202ENST00000546080 CHMP4BQ9H444 224 aaKnown RBP17.64■□□□□ 0.41
SRP54-202ENST00000546080 CABP2Q9NPB3 220 aa17.64■□□□□ 0.41
SRP54-202ENST00000546080 PPIP5K1Q6PFW1 1433 aa17.63■□□□□ 0.41
SRP54-202ENST00000546080 CLEC17AQ6ZS10 378 aa17.63■□□□□ 0.41
SRP54-202ENST00000546080 BAG4O95429 457 aaKnown RBP17.63■□□□□ 0.41
SRP54-202ENST00000546080 MSNP26038 577 aaKnown RBP17.63■□□□□ 0.41
SRP54-202ENST00000546080 GGNBP2Q9H3C7 697 aa17.63■□□□□ 0.41
SRP54-202ENST00000546080 ARHGEF28Q8N1W1 1705 aaKnown RBP17.63■□□□□ 0.41
SRP54-202ENST00000546080 A0A1W2PP64 1363 aa17.62■□□□□ 0.41
SRP54-202ENST00000546080 RPGRIP1LQ68CZ1 1315 aa17.62■□□□□ 0.41
SRP54-202ENST00000546080 PDCL3Q9H2J4 239 aa17.61■□□□□ 0.41
SRP54-202ENST00000546080 REREQ9P2R6 1566 aa17.61■□□□□ 0.41
SRP54-202ENST00000546080 ZBTB7BO15156 539 aaPredicted RBP17.6■□□□□ 0.41
SRP54-202ENST00000546080 CDC45O75419 566 aa17.6■□□□□ 0.41
SRP54-202ENST00000546080 C1orf115Q9H7X2 142 aa17.6■□□□□ 0.41
SRP54-202ENST00000546080 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.6■□□□□ 0.41
SRP54-202ENST00000546080 ZNF428Q96B54 188 aa17.6■□□□□ 0.41
SRP54-202ENST00000546080 OFD1O75665 1012 aa17.59■□□□□ 0.41
SRP54-202ENST00000546080 BRPF1P55201 1214 aaPredicted RBP17.59■□□□□ 0.41
SRP54-202ENST00000546080 NPATQ14207 1427 aa17.59■□□□□ 0.41
SRP54-202ENST00000546080 DIAPH1O60610 1272 aaKnown RBP17.59■□□□□ 0.41
SRP54-202ENST00000546080 ARHGAP31Q2M1Z3 1444 aa17.58■□□□□ 0.41
SRP54-202ENST00000546080 ZNF445P59923 1031 aa17.58■□□□□ 0.4
SRP54-202ENST00000546080 RIMBP3CA6NJZ7 1639 aa17.58■□□□□ 0.4
SRP54-202ENST00000546080 RIMBP3BA6NNM3 1639 aa17.58■□□□□ 0.4
SRP54-202ENST00000546080 RIMBP3Q9UFD9 1639 aa17.58■□□□□ 0.4
SRP54-202ENST00000546080 MCTP1Q6DN14 999 aa17.57■□□□□ 0.4
SRP54-202ENST00000546080 KIDINS220Q9ULH0 1771 aa17.57■□□□□ 0.4
SRP54-202ENST00000546080 ANKRD26Q9UPS8 1709 aa17.57■□□□□ 0.4
SRP54-202ENST00000546080 NUCB2P80303 420 aa17.57■□□□□ 0.4
SRP54-202ENST00000546080 CALD1Q05682 793 aaKnown RBP17.57■□□□□ 0.4
SRP54-202ENST00000546080 SAFB2Q14151 953 aaKnown RBP eCLIP17.57■□□□□ 0.4
SRP54-202ENST00000546080 RABEP1Q15276 862 aa17.57■□□□□ 0.4
SRP54-202ENST00000546080 PTCH1Q13635 1447 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms