RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 PAK3O75914 559 aaPredicted RBP28.5■■■□□ 2.15
HMGA2-211ENST00000545998 ARHGEF10O15013 1369 aa28.5■■■□□ 2.15
HMGA2-211ENST00000545998 KTN1Q86UP2 1357 aaKnown RBP28.49■■■□□ 2.15
HMGA2-211ENST00000545998 NRKQ7Z2Y5 1582 aa28.49■■■□□ 2.15
HMGA2-211ENST00000545998 A0A1W2PP64 1363 aa28.49■■■□□ 2.15
HMGA2-211ENST00000545998 TERF2IPQ9NYB0 399 aa28.49■■■□□ 2.15
HMGA2-211ENST00000545998 HDGFL2Q7Z4V5 671 aaPredicted RBP28.48■■■□□ 2.15
HMGA2-211ENST00000545998 LMOD2Q6P5Q4 547 aa28.47■■■□□ 2.15
HMGA2-211ENST00000545998 ANKRD36BQ8N2N9 1353 aa28.46■■■□□ 2.15
HMGA2-211ENST00000545998 LRP6O75581 1613 aa28.45■■■□□ 2.14
HMGA2-211ENST00000545998 POLR3GLQ9BT43 218 aa28.45■■■□□ 2.14
HMGA2-211ENST00000545998 KIF7Q2M1P5 1343 aa28.44■■■□□ 2.14
HMGA2-211ENST00000545998 MED1Q15648 1581 aaPredicted RBP28.43■■■□□ 2.14
HMGA2-211ENST00000545998 TTC21BQ7Z4L5 1316 aa28.43■■■□□ 2.14
HMGA2-211ENST00000545998 EDC4Q6P2E9 1401 aaKnown RBP28.42■■■□□ 2.14
HMGA2-211ENST00000545998 ABCA3Q99758 1704 aa28.42■■■□□ 2.14
HMGA2-211ENST00000545998 PIK3C2AO00443 1686 aa28.42■■■□□ 2.14
HMGA2-211ENST00000545998 CRYBG1Q9Y4K1 1723 aa28.42■■■□□ 2.14
HMGA2-211ENST00000545998 NUTM2BA6NNL0 878 aaPredicted RBP28.41■■■□□ 2.14
HMGA2-211ENST00000545998 NUTM2EB1AL46 878 aaPredicted RBP28.41■■■□□ 2.14
HMGA2-211ENST00000545998 NUTM2AQ8IVF1 878 aaPredicted RBP28.41■■■□□ 2.14
HMGA2-211ENST00000545998 ABTB2Q8N961 1025 aa28.41■■■□□ 2.14
HMGA2-211ENST00000545998 TTC21AQ8NDW8 1320 aa28.4■■■□□ 2.14
HMGA2-211ENST00000545998 NUTM2GQ5VZR2 741 aa28.37■■■□□ 2.13
HMGA2-211ENST00000545998 CABLES1Q8TDN4 633 aa28.37■■■□□ 2.13
HMGA2-211ENST00000545998 WASHC2AQ641Q2 1341 aa28.37■■■□□ 2.13
HMGA2-211ENST00000545998 CCDC7Q96M83 1385 aa28.37■■■□□ 2.13
HMGA2-211ENST00000545998 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.36■■■□□ 2.13
HMGA2-211ENST00000545998 MARF1Q9Y4F3 1742 aaKnown RBP28.36■■■□□ 2.13
HMGA2-211ENST00000545998 PHRF1Q9P1Y6 1649 aaKnown RBP28.35■■■□□ 2.13
HMGA2-211ENST00000545998 PLEKHG5O94827 1062 aa28.34■■■□□ 2.13
HMGA2-211ENST00000545998 CARD14Q9BXL6 1004 aa28.33■■■□□ 2.13
HMGA2-211ENST00000545998 NLRP13Q86W25 1043 aa28.33■■■□□ 2.12
HMGA2-211ENST00000545998 USP19O94966 1318 aa28.32■■■□□ 2.12
HMGA2-211ENST00000545998 USP54Q70EL1 1684 aa28.32■■■□□ 2.12
HMGA2-211ENST00000545998 ADAMTS2O95450 1211 aa28.32■■■□□ 2.12
HMGA2-211ENST00000545998 NLRP6P59044 892 aa28.32■■■□□ 2.12
HMGA2-211ENST00000545998 MEX3CQ5U5Q3 659 aaKnown RBP28.3■■■□□ 2.12
HMGA2-211ENST00000545998 NME9Q86XW9 330 aa28.3■■■□□ 2.12
HMGA2-211ENST00000545998 HAP1P54257 671 aaPredicted RBP28.29■■■□□ 2.12
HMGA2-211ENST00000545998 PANK3Q9H999 370 aa28.29■■■□□ 2.12
HMGA2-211ENST00000545998 USP31Q70CQ4 1352 aa28.29■■■□□ 2.12
HMGA2-211ENST00000545998 NSD3Q9BZ95 1437 aa28.29■■■□□ 2.12
HMGA2-211ENST00000545998 SLIT3O75094 1523 aa28.28■■■□□ 2.12
HMGA2-211ENST00000545998 ZRANB1Q9UGI0 708 aa28.28■■■□□ 2.12
HMGA2-211ENST00000545998 KIF20BQ96Q89 1820 aa28.27■■■□□ 2.12
HMGA2-211ENST00000545998 C8orf37Q96NL8 207 aa28.24■■■□□ 2.11
HMGA2-211ENST00000545998 OVOS2A0A0J9YW53 1432 aa28.24■■■□□ 2.11
HMGA2-211ENST00000545998 OVOS2Q6IE36 1432 aa28.24■■■□□ 2.11
HMGA2-211ENST00000545998 GCP02774 474 aa28.24■■■□□ 2.11
HMGA2-211ENST00000545998 FYB1O15117 783 aa28.23■■■□□ 2.11
HMGA2-211ENST00000545998 NGLY1Q96IV0 654 aa28.2■■■□□ 2.1
HMGA2-211ENST00000545998 NFAT5O94916 1531 aa28.19■■■□□ 2.1
HMGA2-211ENST00000545998 ZC3H6P61129 1189 aaKnown RBP28.19■■■□□ 2.1
HMGA2-211ENST00000545998 PHF23Q9BUL5 403 aaPredicted RBP28.19■■■□□ 2.1
HMGA2-211ENST00000545998 KIAA0232Q92628 1395 aa28.19■■■□□ 2.1
HMGA2-211ENST00000545998 CGNL1Q0VF96 1302 aa28.18■■■□□ 2.1
HMGA2-211ENST00000545998 FAM83GA6ND36 823 aa28.18■■■□□ 2.1
HMGA2-211ENST00000545998 KCNH5Q8NCM2 988 aa28.18■■■□□ 2.1
HMGA2-211ENST00000545998 GGNBP2Q9H3C7 697 aa28.18■■■□□ 2.1
HMGA2-211ENST00000545998 CPDO75976 1380 aa28.18■■■□□ 2.1
HMGA2-211ENST00000545998 COL14A1Q05707 1796 aaKnown RBP28.18■■■□□ 2.1
HMGA2-211ENST00000545998 AFF2P51816 1311 aa28.18■■■□□ 2.1
HMGA2-211ENST00000545998 PLCH1Q4KWH8 1693 aa28.17■■■□□ 2.1
HMGA2-211ENST00000545998 FNBP4Q8N3X1 1017 aaPredicted RBP28.17■■■□□ 2.1
HMGA2-211ENST00000545998 COG3Q96JB2 828 aa28.17■■■□□ 2.1
HMGA2-211ENST00000545998 RGS17Q9UGC6 210 aaPredicted RBP28.17■■■□□ 2.1
HMGA2-211ENST00000545998 SLIT2O94813 1529 aa28.16■■■□□ 2.1
HMGA2-211ENST00000545998 PRDM11Q9NQV5 511 aa28.15■■■□□ 2.1
HMGA2-211ENST00000545998 NWD2Q9ULI1 1742 aa28.15■■■□□ 2.1
HMGA2-211ENST00000545998 ANKRD26Q9UPS8 1709 aa28.13■■■□□ 2.09
HMGA2-211ENST00000545998 SOX12O15370 315 aa28.13■■■□□ 2.09
HMGA2-211ENST00000545998 PER1O15534 1290 aaPredicted RBP28.13■■■□□ 2.09
HMGA2-211ENST00000545998 KNSTRNQ9Y448 316 aa28.13■■■□□ 2.09
HMGA2-211ENST00000545998 BCL9LQ86UU0 1499 aa28.12■■■□□ 2.09
HMGA2-211ENST00000545998 CHRNA2Q15822 529 aa28.11■■■□□ 2.09
HMGA2-211ENST00000545998 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.11■■■□□ 2.09
HMGA2-211ENST00000545998 ZNF772Q68DY9 489 aaPredicted RBP28.11■■■□□ 2.09
HMGA2-211ENST00000545998 ARHGEF25Q86VW2 580 aa28.11■■■□□ 2.09
HMGA2-211ENST00000545998 LMO7Q8WWI1 1683 aa28.11■■■□□ 2.09
HMGA2-211ENST00000545998 USP21Q9UK80 565 aa28.1■■■□□ 2.09
HMGA2-211ENST00000545998 LTN1O94822 1766 aa28.1■■■□□ 2.09
HMGA2-211ENST00000545998 COL18A1P39060 1754 aa28.1■■■□□ 2.09
HMGA2-211ENST00000545998 NSD2O96028 1365 aa28.09■■■□□ 2.09
HMGA2-211ENST00000545998 NRAPQ86VF7 1730 aa28.09■■■□□ 2.09
HMGA2-211ENST00000545998 AMER1Q5JTC6 1135 aaPredicted RBP28.08■■■□□ 2.09
HMGA2-211ENST00000545998 BTG4Q9NY30 223 aa28.07■■■□□ 2.08
HMGA2-211ENST00000545998 AATKQ6ZMQ8 1374 aa28.07■■■□□ 2.08
HMGA2-211ENST00000545998 UNC5CLQ8IV45 518 aa28.06■■■□□ 2.08
HMGA2-211ENST00000545998 ZBTB7CA1YPR0 619 aa28.05■■■□□ 2.08
HMGA2-211ENST00000545998 CAMTA1Q9Y6Y1 1673 aa28.05■■■□□ 2.08
HMGA2-211ENST00000545998 FBLN1P23142 703 aa28.04■■■□□ 2.08
HMGA2-211ENST00000545998 POTEAQ6S8J7 498 aa28.04■■■□□ 2.08
HMGA2-211ENST00000545998 ABCC6O95255 1503 aa28.03■■■□□ 2.08
HMGA2-211ENST00000545998 RGPD5Q99666 1765 aa28.03■■■□□ 2.08
HMGA2-211ENST00000545998 ATRNO75882 1429 aa28.02■■■□□ 2.08
HMGA2-211ENST00000545998 QTRT2Q9H974 415 aaKnown RBP28.02■■■□□ 2.08
HMGA2-211ENST00000545998 ZNF316A6NFI3 1004 aaPredicted RBP28.01■■■□□ 2.07
HMGA2-211ENST00000545998 TRPC5Q9UL62 973 aaPredicted RBP28.01■■■□□ 2.07
HMGA2-211ENST00000545998 AXIN2Q9Y2T1 843 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms