RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 SMARCE1Q969G3 411 aa14□□□□□ -0.17
CIT-217ENST00000545913 NLRP6P59044 892 aa14□□□□□ -0.17
CIT-217ENST00000545913 GRIN2BQ13224 1484 aa13.99□□□□□ -0.17
CIT-217ENST00000545913 GGNBP2Q9H3C7 697 aa13.99□□□□□ -0.17
CIT-217ENST00000545913 HSP90AB2PQ58FF8 381 aa13.99□□□□□ -0.17
CIT-217ENST00000545913 ERCC4Q92889 916 aaPredicted RBP13.99□□□□□ -0.17
CIT-217ENST00000545913 PDILTQ8N807 584 aa13.99□□□□□ -0.17
CIT-217ENST00000545913 IKQ13123 557 aaPredicted RBP13.99□□□□□ -0.17
CIT-217ENST00000545913 GNAI2P04899 355 aa13.99□□□□□ -0.17
CIT-217ENST00000545913 DCTN1Q14203 1278 aa13.99□□□□□ -0.17
CIT-217ENST00000545913 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.99□□□□□ -0.172e-6■■■■■ 64.2
CIT-217ENST00000545913 HFM1A2PYH4 1435 aa13.99□□□□□ -0.17
CIT-217ENST00000545913 IGF1RP08069 1367 aa13.98□□□□□ -0.17
CIT-217ENST00000545913 ZNF396Q96N95 335 aaPredicted RBP13.98□□□□□ -0.17
CIT-217ENST00000545913 DHX8Q14562 1220 aaKnown RBP13.98□□□□□ -0.17
CIT-217ENST00000545913 FILIP1LQ4L180 1135 aa13.98□□□□□ -0.17
CIT-217ENST00000545913 CDK5RAP3Q96JB5 506 aa13.98□□□□□ -0.17
CIT-217ENST00000545913 RABEP1Q15276 862 aa13.98□□□□□ -0.17
CIT-217ENST00000545913 PLEKHO1Q53GL0 409 aaPredicted RBP13.98□□□□□ -0.17
CIT-217ENST00000545913 GCC1Q96CN9 775 aa13.98□□□□□ -0.17
CIT-217ENST00000545913 ZFYVE27Q5T4F4 411 aa13.97□□□□□ -0.17
CIT-217ENST00000545913 MAGEC2Q9UBF1 373 aaPredicted RBP13.97□□□□□ -0.17
CIT-217ENST00000545913 SURF6O75683 361 aaKnown RBP13.97□□□□□ -0.17
CIT-217ENST00000545913 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.97□□□□□ -0.172e-6■■■□□ 19.1
CIT-217ENST00000545913 PIP4K2AP48426 406 aaPredicted RBP13.97□□□□□ -0.17
CIT-217ENST00000545913 ANKRD1Q15327 319 aa13.97□□□□□ -0.17
CIT-217ENST00000545913 JMYQ8N9B5 988 aa13.97□□□□□ -0.17
CIT-217ENST00000545913 SAMD1Q6SPF0 538 aaPredicted RBP13.97□□□□□ -0.17
CIT-217ENST00000545913 TRIM5Q9C035 493 aa13.97□□□□□ -0.17
CIT-217ENST00000545913 NFKBIBQ15653 356 aa13.97□□□□□ -0.17
CIT-217ENST00000545913 GNL3LQ9NVN8 582 aaKnown RBP13.97□□□□□ -0.17
CIT-217ENST00000545913 MAP7D2Q96T17 732 aa13.96□□□□□ -0.17
CIT-217ENST00000545913 ZNF644Q9H582 1327 aaPredicted RBP13.96□□□□□ -0.17
CIT-217ENST00000545913 ADAMTS8Q9UP79 889 aa13.96□□□□□ -0.17
CIT-217ENST00000545913 C9orf84Q5VXU9 1444 aa13.96□□□□□ -0.17
CIT-217ENST00000545913 CWC15Q9P013 229 aaKnown RBP13.96□□□□□ -0.17
CIT-217ENST00000545913 CT47B1P0C2W7 299 aaPredicted RBP13.96□□□□□ -0.18
CIT-217ENST00000545913 PDE3AQ14432 1141 aa13.95□□□□□ -0.18
CIT-217ENST00000545913 CCAR1Q8IX12 1150 aaKnown RBP13.95□□□□□ -0.18
CIT-217ENST00000545913 WWC2Q6AWC2 1192 aa13.95□□□□□ -0.18
CIT-217ENST00000545913 TCP11L2Q8N4U5 519 aa13.95□□□□□ -0.18
CIT-217ENST00000545913 CCT4P50991 539 aaKnown RBP13.95□□□□□ -0.18
CIT-217ENST00000545913 NUTM2GQ5VZR2 741 aa13.95□□□□□ -0.18
CIT-217ENST00000545913 TOP2BQ02880 1626 aa13.95□□□□□ -0.18
CIT-217ENST00000545913 NEK4P51957 841 aa13.95□□□□□ -0.18
CIT-217ENST00000545913 CCDC158Q5M9N0 1113 aa13.94□□□□□ -0.18
CIT-217ENST00000545913 CAVIN1Q6NZI2 390 aaKnown RBP13.94□□□□□ -0.18
CIT-217ENST00000545913 TSPY26PQ9H489 355 aa13.94□□□□□ -0.18
CIT-217ENST00000545913 SMC2O95347 1197 aa13.94□□□□□ -0.18
CIT-217ENST00000545913 VSIG10Q8N0Z9 540 aa13.94□□□□□ -0.18
CIT-217ENST00000545913 CFTRP13569 1480 aa13.94□□□□□ -0.18
CIT-217ENST00000545913 TIAM1Q13009 1591 aa13.94□□□□□ -0.18
CIT-217ENST00000545913 TRAK2O60296 914 aa13.94□□□□□ -0.18
CIT-217ENST00000545913 TMEM132EQ6IEE7 984 aa13.94□□□□□ -0.18
CIT-217ENST00000545913 DNAJC2Q99543 621 aaKnown RBP13.94□□□□□ -0.18
CIT-217ENST00000545913 SYCP1Q15431 976 aa13.94□□□□□ -0.18
CIT-217ENST00000545913 LUC7LQ9NQ29 371 aaKnown RBP13.94□□□□□ -0.18
CIT-217ENST00000545913 TWISTNBQ3B726 338 aaPredicted RBP13.93□□□□□ -0.18
CIT-217ENST00000545913 TTC39AQ5SRH9 613 aa13.93□□□□□ -0.18
CIT-217ENST00000545913 SYNJ1O43426 1573 aa13.93□□□□□ -0.18
CIT-217ENST00000545913 PRKAR2BP31323 418 aa13.93□□□□□ -0.18
CIT-217ENST00000545913 CNNM1Q9NRU3 951 aa13.93□□□□□ -0.18
CIT-217ENST00000545913 AEBP1Q8IUX7 1158 aa13.92□□□□□ -0.18
CIT-217ENST00000545913 STIM1Q13586 685 aa13.92□□□□□ -0.18
CIT-217ENST00000545913 SRCIN1Q9C0H9 1055 aa13.92□□□□□ -0.18
CIT-217ENST00000545913 KIAA1107Q9UPP5 1409 aa13.92□□□□□ -0.18
CIT-217ENST00000545913 TXLNBQ8N3L3 684 aa13.92□□□□□ -0.18
CIT-217ENST00000545913 CUL7Q14999 1698 aa13.92□□□□□ -0.18
CIT-217ENST00000545913 FBXO3Q9UK99 471 aa13.92□□□□□ -0.18
CIT-217ENST00000545913 PPP2R1AP30153 589 aa13.92□□□□□ -0.18
CIT-217ENST00000545913 ZNHIT6Q9NWK9 470 aaKnown RBP13.92□□□□□ -0.18
CIT-217ENST00000545913 TRIM22Q8IYM9 498 aa13.92□□□□□ -0.18
CIT-217ENST00000545913 LRRCC1Q9C099 1032 aa13.91□□□□□ -0.18
CIT-217ENST00000545913 ESCO1Q5FWF5 840 aa13.91□□□□□ -0.18
CIT-217ENST00000545913 CCDC191Q8NCU4 936 aa13.91□□□□□ -0.18
CIT-217ENST00000545913 PNISRQ8TF01 805 aaKnown RBP13.91□□□□□ -0.18
CIT-217ENST00000545913 NACAP1Q9BZK3 213 aa13.91□□□□□ -0.18
CIT-217ENST00000545913 DACH1Q9UI36 760 aa13.91□□□□□ -0.18
CIT-217ENST00000545913 MTMR7Q9Y216 660 aa13.91□□□□□ -0.18
CIT-217ENST00000545913 CYP46A1Q9Y6A2 500 aa13.91□□□□□ -0.18
CIT-217ENST00000545913 AQRO60306 1485 aaKnown RBP eCLIP13.91□□□□□ -0.182e-7■■■■■ 42.6
CIT-217ENST00000545913 ZNF692Q9BU19 519 aaPredicted RBP13.9□□□□□ -0.18
CIT-217ENST00000545913 HMGN5P82970 282 aaKnown RBP13.9□□□□□ -0.18
CIT-217ENST00000545913 TMEM132AQ24JP5 1023 aa13.9□□□□□ -0.18
CIT-217ENST00000545913 NOB1Q9ULX3 412 aaKnown RBP13.9□□□□□ -0.18
CIT-217ENST00000545913 TATP17735 454 aaPredicted RBP13.9□□□□□ -0.18
CIT-217ENST00000545913 STK38Q15208 465 aa13.9□□□□□ -0.18
CIT-217ENST00000545913 HDGFL1Q5TGJ6 251 aa13.9□□□□□ -0.18
CIT-217ENST00000545913 TTLL5Q6EMB2 1281 aa13.9□□□□□ -0.18
CIT-217ENST00000545913 RNF214Q8ND24 703 aa13.9□□□□□ -0.18
CIT-217ENST00000545913 CCDC192P0DO97 292 aa13.9□□□□□ -0.18
CIT-217ENST00000545913 ERLIN2O94905 339 aa13.9□□□□□ -0.18
CIT-217ENST00000545913 KLHL34Q8N239 644 aa13.9□□□□□ -0.18
CIT-217ENST00000545913 KRT18P05783 430 aaKnown RBP13.89□□□□□ -0.19
CIT-217ENST00000545913 ZSCAN25Q6NSZ9 544 aa13.89□□□□□ -0.19
CIT-217ENST00000545913 PRAM1Q96QH2 718 aa13.89□□□□□ -0.19
CIT-217ENST00000545913 WDR33Q9C0J8 1336 aaKnown RBP13.89□□□□□ -0.19
CIT-217ENST00000545913 CFAP65Q6ZU64 1925 aaKnown RBP13.88□□□□□ -0.19
CIT-217ENST00000545913 H0YHG0 523 aa13.88□□□□□ -0.19
CIT-217ENST00000545913 WDR63Q8IWG1 891 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms