RNA–Protein interactions for RNA: ENST00000545809.1

CCDC189-210, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,055 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-210ENST00000545809 USP6P35125 1406 aa32.34■■■□□ 2.77
CCDC189-210ENST00000545809 NGLY1Q96IV0 654 aa32.33■■■□□ 2.77
CCDC189-210ENST00000545809 AFF2P51816 1311 aa32.32■■■□□ 2.76
CCDC189-210ENST00000545809 ZNF772Q68DY9 489 aaPredicted RBP32.32■■■□□ 2.76
CCDC189-210ENST00000545809 TMC1Q8TDI8 760 aa32.32■■■□□ 2.76
CCDC189-210ENST00000545809 ZNF692Q9BU19 519 aaPredicted RBP32.32■■■□□ 2.76
CCDC189-210ENST00000545809 ILDR2Q71H61 639 aa32.31■■■□□ 2.76
CCDC189-210ENST00000545809 EIF4G2P78344 907 aaKnown RBP eCLIP32.3■■■□□ 2.76
CCDC189-210ENST00000545809 CPSF1Q10570 1443 aaKnown RBP32.28■■■□□ 2.76
CCDC189-210ENST00000545809 POTEAQ6S8J7 498 aa32.28■■■□□ 2.76
CCDC189-210ENST00000545809 ABTB2Q8N961 1025 aa32.28■■■□□ 2.76
CCDC189-210ENST00000545809 ABCA3Q99758 1704 aa32.28■■■□□ 2.76
CCDC189-210ENST00000545809 MARF1Q9Y4F3 1742 aaKnown RBP32.27■■■□□ 2.76
CCDC189-210ENST00000545809 CDCA8Q53HL2 280 aa32.26■■■□□ 2.75
CCDC189-210ENST00000545809 SLC12A5Q9H2X9 1139 aa32.26■■■□□ 2.75
CCDC189-210ENST00000545809 AKAP12Q02952 1782 aa32.26■■■□□ 2.75
CCDC189-210ENST00000545809 KTN1Q86UP2 1357 aaKnown RBP32.25■■■□□ 2.75
CCDC189-210ENST00000545809 NUTM2GQ5VZR2 741 aa32.25■■■□□ 2.75
CCDC189-210ENST00000545809 NINLQ9Y2I6 1382 aa32.24■■■□□ 2.75
CCDC189-210ENST00000545809 SSH2Q76I76 1423 aa32.24■■■□□ 2.75
CCDC189-210ENST00000545809 HSPA5P11021 654 aaKnown RBP32.23■■■□□ 2.75
CCDC189-210ENST00000545809 HDGFL2Q7Z4V5 671 aaPredicted RBP32.23■■■□□ 2.75
CCDC189-210ENST00000545809 FNBP4Q8N3X1 1017 aaPredicted RBP32.22■■■□□ 2.75
CCDC189-210ENST00000545809 TERF2IPQ9NYB0 399 aa32.22■■■□□ 2.75
CCDC189-210ENST00000545809 CD163L1Q9NR16 1453 aa32.21■■■□□ 2.75
CCDC189-210ENST00000545809 CRYBG1Q9Y4K1 1723 aa32.2■■■□□ 2.75
CCDC189-210ENST00000545809 NLRP13Q86W25 1043 aa32.2■■■□□ 2.75
CCDC189-210ENST00000545809 USP21Q9UK80 565 aa32.2■■■□□ 2.75
CCDC189-210ENST00000545809 TTC21BQ7Z4L5 1316 aa32.2■■■□□ 2.74
CCDC189-210ENST00000545809 MON2Q7Z3U7 1717 aa32.18■■■□□ 2.74
CCDC189-210ENST00000545809 TTC21AQ8NDW8 1320 aa32.18■■■□□ 2.74
CCDC189-210ENST00000545809 NRKQ7Z2Y5 1582 aa32.16■■■□□ 2.74
CCDC189-210ENST00000545809 PHRF1Q9P1Y6 1649 aaKnown RBP32.16■■■□□ 2.74
CCDC189-210ENST00000545809 NLRP6P59044 892 aa32.16■■■□□ 2.74
CCDC189-210ENST00000545809 USP19O94966 1318 aa32.16■■■□□ 2.74
CCDC189-210ENST00000545809 A0A1W2PP64 1363 aa32.16■■■□□ 2.74
CCDC189-210ENST00000545809 QTRT2Q9H974 415 aaKnown RBP32.15■■■□□ 2.74
CCDC189-210ENST00000545809 PIK3C2AO00443 1686 aa32.13■■■□□ 2.73
CCDC189-210ENST00000545809 SLIT2O94813 1529 aa32.13■■■□□ 2.73
CCDC189-210ENST00000545809 EDC4Q6P2E9 1401 aaKnown RBP32.12■■■□□ 2.73
CCDC189-210ENST00000545809 FAM83GA6ND36 823 aa32.12■■■□□ 2.73
CCDC189-210ENST00000545809 BCL9LQ86UU0 1499 aa32.11■■■□□ 2.73
CCDC189-210ENST00000545809 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.11■■■□□ 2.73
CCDC189-210ENST00000545809 TRPC5Q9UL62 973 aaPredicted RBP32.11■■■□□ 2.73
CCDC189-210ENST00000545809 RXRBP28702 533 aa32.1■■■□□ 2.73
CCDC189-210ENST00000545809 PRDM11Q9NQV5 511 aa32.1■■■□□ 2.73
CCDC189-210ENST00000545809 ANKRD36BQ8N2N9 1353 aa32.09■■■□□ 2.73
CCDC189-210ENST00000545809 UNC5CLQ8IV45 518 aa32.09■■■□□ 2.73
CCDC189-210ENST00000545809 PLCH1Q4KWH8 1693 aa32.08■■■□□ 2.73
CCDC189-210ENST00000545809 KIAA0232Q92628 1395 aa32.08■■■□□ 2.73
CCDC189-210ENST00000545809 GCP02774 474 aa32.08■■■□□ 2.73
CCDC189-210ENST00000545809 ZC3H6P61129 1189 aaKnown RBP32.08■■■□□ 2.73
CCDC189-210ENST00000545809 COL14A1Q05707 1796 aaKnown RBP32.07■■■□□ 2.72
CCDC189-210ENST00000545809 ATRNO75882 1429 aa32.07■■■□□ 2.72
CCDC189-210ENST00000545809 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.06■■■□□ 2.72
CCDC189-210ENST00000545809 NWD2Q9ULI1 1742 aa32.06■■■□□ 2.72
CCDC189-210ENST00000545809 SLIT3O75094 1523 aa32.05■■■□□ 2.72
CCDC189-210ENST00000545809 RBM6P78332 1123 aaKnown RBP32.05■■■□□ 2.72
CCDC189-210ENST00000545809 POLR3GLQ9BT43 218 aa32.05■■■□□ 2.72
CCDC189-210ENST00000545809 NME9Q86XW9 330 aa32.03■■■□□ 2.72
CCDC189-210ENST00000545809 BTG4Q9NY30 223 aa32.03■■■□□ 2.72
CCDC189-210ENST00000545809 CPDO75976 1380 aa32.03■■■□□ 2.72
CCDC189-210ENST00000545809 USP31Q70CQ4 1352 aa32.02■■■□□ 2.72
CCDC189-210ENST00000545809 MYOM1P52179 1685 aa32.02■■■□□ 2.72
CCDC189-210ENST00000545809 CHRNA2Q15822 529 aa32.01■■■□□ 2.71
CCDC189-210ENST00000545809 KCNH5Q8NCM2 988 aa32■■■□□ 2.71
CCDC189-210ENST00000545809 ZRANB1Q9UGI0 708 aa32■■■□□ 2.71
CCDC189-210ENST00000545809 CDK12Q9NYV4 1490 aaPredicted RBP31.98■■■□□ 2.71
CCDC189-210ENST00000545809 VPS72Q15906 364 aa31.97■■■□□ 2.71
CCDC189-210ENST00000545809 GJD4Q96KN9 370 aaPredicted RBP31.97■■■□□ 2.71
CCDC189-210ENST00000545809 USP54Q70EL1 1684 aa31.96■■■□□ 2.71
CCDC189-210ENST00000545809 NRAPQ86VF7 1730 aa31.95■■■□□ 2.71
CCDC189-210ENST00000545809 SOCS7O14512 581 aa31.95■■■□□ 2.71
CCDC189-210ENST00000545809 SOX12O15370 315 aa31.95■■■□□ 2.71
CCDC189-210ENST00000545809 ZBTB7CA1YPR0 619 aa31.94■■■□□ 2.7
CCDC189-210ENST00000545809 C11orf95C9JLR9 678 aaPredicted RBP31.94■■■□□ 2.7
CCDC189-210ENST00000545809 CCDC9Q9Y3X0 531 aaKnown RBP31.94■■■□□ 2.7
CCDC189-210ENST00000545809 OVOS2A0A0J9YW53 1432 aa31.92■■■□□ 2.7
CCDC189-210ENST00000545809 OVOS2Q6IE36 1432 aa31.92■■■□□ 2.7
CCDC189-210ENST00000545809 NFAT5O94916 1531 aa31.9■■■□□ 2.7
CCDC189-210ENST00000545809 COG3Q96JB2 828 aa31.9■■■□□ 2.7
CCDC189-210ENST00000545809 RGS12O14924 1447 aa31.9■■■□□ 2.7
CCDC189-210ENST00000545809 LMO7Q8WWI1 1683 aa31.89■■■□□ 2.7
CCDC189-210ENST00000545809 ARHGEF25Q86VW2 580 aa31.89■■■□□ 2.7
CCDC189-210ENST00000545809 CARD14Q9BXL6 1004 aa31.89■■■□□ 2.7
CCDC189-210ENST00000545809 AATKQ6ZMQ8 1374 aa31.89■■■□□ 2.7
CCDC189-210ENST00000545809 STRN4Q9NRL3 753 aa31.88■■■□□ 2.69
CCDC189-210ENST00000545809 NSD3Q9BZ95 1437 aa31.88■■■□□ 2.69
CCDC189-210ENST00000545809 GLI3P10071 1580 aa31.88■■■□□ 2.69
CCDC189-210ENST00000545809 CAMTA1Q9Y6Y1 1673 aa31.88■■■□□ 2.69
CCDC189-210ENST00000545809 EVA1CP58658 441 aa31.87■■■□□ 2.69
CCDC189-210ENST00000545809 FYB1O15117 783 aa31.86■■■□□ 2.69
CCDC189-210ENST00000545809 KIF7Q2M1P5 1343 aa31.85■■■□□ 2.69
CCDC189-210ENST00000545809 GGNBP2Q9H3C7 697 aa31.84■■■□□ 2.69
CCDC189-210ENST00000545809 SPATA31A5Q5VU36 1347 aa31.82■■■□□ 2.68
CCDC189-210ENST00000545809 SPATA31A7Q8IWB4 1347 aa31.82■■■□□ 2.68
CCDC189-210ENST00000545809 COL5A2P05997 1499 aaPredicted RBP31.81■■■□□ 2.68
CCDC189-210ENST00000545809 PANK3Q9H999 370 aa31.81■■■□□ 2.68
CCDC189-210ENST00000545809 KIF20BQ96Q89 1820 aa31.8■■■□□ 2.68
CCDC189-210ENST00000545809 COL18A1P39060 1754 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms