RNA–Protein interactions for RNA: ENST00000545051.2

SMAD7-202, Transcript of SMAD family member 7, humanhuman

TSL 2

Gene SMAD7, Length 2,211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-202ENST00000545051 SLIT1O75093 1534 aa18.42■□□□□ 0.54
SMAD7-202ENST00000545051 TNNT2P45379 298 aaPredicted RBP18.41■□□□□ 0.54
SMAD7-202ENST00000545051 EID1Q9Y6B2 187 aa18.41■□□□□ 0.54
SMAD7-202ENST00000545051 MYO5BQ9ULV0 1848 aa18.41■□□□□ 0.54
SMAD7-202ENST00000545051 TMEM2Q9UHN6 1383 aa18.41■□□□□ 0.54
SMAD7-202ENST00000545051 MYH16Q9H6N6 1097 aa18.41■□□□□ 0.54
SMAD7-202ENST00000545051 RTN4Q9NQC3 1192 aaKnown RBP18.41■□□□□ 0.54
SMAD7-202ENST00000545051 TULP4Q9NRJ4 1543 aa18.4■□□□□ 0.54
SMAD7-202ENST00000545051 ARHGAP23Q9P227 1491 aa18.4■□□□□ 0.54
SMAD7-202ENST00000545051 ANKRD36BQ8N2N9 1353 aa18.4■□□□□ 0.54
SMAD7-202ENST00000545051 UPF2Q9HAU5 1272 aaKnown RBP18.4■□□□□ 0.54
SMAD7-202ENST00000545051 STRCQ7RTU9 1775 aa18.4■□□□□ 0.54
SMAD7-202ENST00000545051 MTHFSP49914 203 aa18.39■□□□□ 0.54
SMAD7-202ENST00000545051 BRPF3Q9ULD4 1205 aa18.39■□□□□ 0.54
SMAD7-202ENST00000545051 SEC24BO95487 1268 aa18.39■□□□□ 0.53
SMAD7-202ENST00000545051 NCKAP5LQ9HCH0 1330 aa18.38■□□□□ 0.53
SMAD7-202ENST00000545051 RWDD1Q9H446 243 aaPredicted RBP18.38■□□□□ 0.53
SMAD7-202ENST00000545051 RLBP1P12271 317 aa18.38■□□□□ 0.53
SMAD7-202ENST00000545051 PCDHB15Q9Y5E8 787 aa18.38■□□□□ 0.53
SMAD7-202ENST00000545051 EVC2Q86UK5 1308 aa18.37■□□□□ 0.53
SMAD7-202ENST00000545051 TXNDC2Q86VQ3 553 aa18.37■□□□□ 0.53
SMAD7-202ENST00000545051 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.37■□□□□ 0.53
SMAD7-202ENST00000545051 RIMS2Q9UQ26 1411 aa18.37■□□□□ 0.53
SMAD7-202ENST00000545051 ANKRD26Q9UPS8 1709 aa18.36■□□□□ 0.53
SMAD7-202ENST00000545051 CT47B1P0C2W7 299 aaPredicted RBP18.36■□□□□ 0.53
SMAD7-202ENST00000545051 PDZRN3Q9UPQ7 1066 aa18.36■□□□□ 0.53
SMAD7-202ENST00000545051 NEXMIFQ5QGS0 1516 aa18.36■□□□□ 0.53
SMAD7-202ENST00000545051 MVPQ14764 893 aaKnown RBP18.34■□□□□ 0.53
SMAD7-202ENST00000545051 TBC1D32Q96NH3 1257 aa18.34■□□□□ 0.53
SMAD7-202ENST00000545051 TNNQ9UQP3 1299 aa18.34■□□□□ 0.53
SMAD7-202ENST00000545051 MED14O60244 1454 aa18.34■□□□□ 0.53
SMAD7-202ENST00000545051 PRKCSHP14314 528 aaPredicted RBP18.34■□□□□ 0.53
SMAD7-202ENST00000545051 TMEM132EQ6IEE7 984 aa18.34■□□□□ 0.53
SMAD7-202ENST00000545051 BCL2L13Q9BXK5 485 aa18.34■□□□□ 0.53
SMAD7-202ENST00000545051 ZFYVE9O95405 1425 aa18.33■□□□□ 0.53
SMAD7-202ENST00000545051 ZKSCAN2Q63HK3 967 aa18.33■□□□□ 0.53
SMAD7-202ENST00000545051 NPHP4O75161 1426 aaPredicted RBP18.33■□□□□ 0.52
SMAD7-202ENST00000545051 U2AF1L5P0DN76 240 aaPredicted RBP18.32■□□□□ 0.52
SMAD7-202ENST00000545051 LTKP29376 864 aa18.32■□□□□ 0.52
SMAD7-202ENST00000545051 U2AF1Q01081 240 aaKnown RBP eCLIP18.32■□□□□ 0.52
SMAD7-202ENST00000545051 FTSJ3Q8IY81 847 aaKnown RBP18.31■□□□□ 0.52
SMAD7-202ENST00000545051 ABCC11Q96J66 1382 aa18.31■□□□□ 0.52
SMAD7-202ENST00000545051 DZIP1LQ8IYY4 767 aaKnown RBP18.3■□□□□ 0.52
SMAD7-202ENST00000545051 COL3A1P02461 1466 aaPredicted RBP18.29■□□□□ 0.52
SMAD7-202ENST00000545051 SLKQ9H2G2 1235 aaPredicted RBP18.29■□□□□ 0.52
SMAD7-202ENST00000545051 ANTXR1Q9H6X2 564 aa18.29■□□□□ 0.52
SMAD7-202ENST00000545051 VGFO15240 615 aaPredicted RBP18.29■□□□□ 0.52
SMAD7-202ENST00000545051 PLEKHG1Q9ULL1 1385 aa18.28■□□□□ 0.52
SMAD7-202ENST00000545051 ANO8Q9HCE9 1232 aaPredicted RBP18.27■□□□□ 0.52
SMAD7-202ENST00000545051 A0A1W2PP64 1363 aa18.26■□□□□ 0.51
SMAD7-202ENST00000545051 NUTM2DQ5VT03 806 aaPredicted RBP18.26■□□□□ 0.51
SMAD7-202ENST00000545051 TBC1D2Q9BYX2 928 aa18.26■□□□□ 0.51
SMAD7-202ENST00000545051 SMC4Q9NTJ3 1288 aa18.26■□□□□ 0.51
SMAD7-202ENST00000545051 IL16Q14005 1332 aa18.25■□□□□ 0.51
SMAD7-202ENST00000545051 HDAC1Q13547 482 aaPredicted RBP18.25■□□□□ 0.51
SMAD7-202ENST00000545051 POGKQ9P215 609 aa18.25■□□□□ 0.51
SMAD7-202ENST00000545051 DDX19BQ9UMR2 479 aa18.25■□□□□ 0.51
SMAD7-202ENST00000545051 PLEKHF1Q96S99 279 aa18.24■□□□□ 0.51
SMAD7-202ENST00000545051 CABP2Q9NPB3 220 aa18.24■□□□□ 0.51
SMAD7-202ENST00000545051 TSR2Q969E8 191 aaKnown RBP18.23■□□□□ 0.51
SMAD7-202ENST00000545051 KIF20BQ96Q89 1820 aa18.23■□□□□ 0.51
SMAD7-202ENST00000545051 TMPOP42166 694 aaKnown RBP18.23■□□□□ 0.51
SMAD7-202ENST00000545051 EXOSC9Q06265 439 aaKnown RBP18.23■□□□□ 0.51
SMAD7-202ENST00000545051 ATAD2Q6PL18 1390 aa18.23■□□□□ 0.51
SMAD7-202ENST00000545051 L1TD1Q5T7N2 865 aaKnown RBP18.22■□□□□ 0.51
SMAD7-202ENST00000545051 TRIM27P14373 513 aa18.22■□□□□ 0.51
SMAD7-202ENST00000545051 FAM43AQ8N2R8 423 aa18.22■□□□□ 0.51
SMAD7-202ENST00000545051 DIP2AQ14689 1571 aa18.21■□□□□ 0.51
SMAD7-202ENST00000545051 U2SURPO15042 1029 aaKnown RBP18.21■□□□□ 0.51
SMAD7-202ENST00000545051 ATF7IPQ6VMQ6 1270 aa18.21■□□□□ 0.51
SMAD7-202ENST00000545051 CDC42BPGQ6DT37 1551 aa18.21■□□□□ 0.51
SMAD7-202ENST00000545051 TRIM35Q9UPQ4 493 aa18.21■□□□□ 0.5
SMAD7-202ENST00000545051 ITPRIPQ8IWB1 547 aa18.2■□□□□ 0.5
SMAD7-202ENST00000545051 C22orf23Q9BZE7 217 aa18.2■□□□□ 0.5
SMAD7-202ENST00000545051 KIF16BQ96L93 1317 aa18.2■□□□□ 0.5
SMAD7-202ENST00000545051 SSH1Q8WYL5 1049 aa18.19■□□□□ 0.5
SMAD7-202ENST00000545051 SLC26A8Q96RN1 970 aa18.19■□□□□ 0.5
SMAD7-202ENST00000545051 PNNQ9H307 717 aaKnown RBP18.19■□□□□ 0.5
SMAD7-202ENST00000545051 TBX22Q9Y458 520 aa18.19■□□□□ 0.5
SMAD7-202ENST00000545051 SRPK2P78362 688 aaKnown RBP18.18■□□□□ 0.5
SMAD7-202ENST00000545051 SMC5Q8IY18 1101 aa18.18■□□□□ 0.5
SMAD7-202ENST00000545051 TERF2IPQ9NYB0 399 aa18.18■□□□□ 0.5
SMAD7-202ENST00000545051 GGNBP2Q9H3C7 697 aa18.18■□□□□ 0.5
SMAD7-202ENST00000545051 SENP3Q9H4L4 574 aaPredicted RBP18.18■□□□□ 0.5
SMAD7-202ENST00000545051 CD163L1Q9NR16 1453 aa18.17■□□□□ 0.5
SMAD7-202ENST00000545051 ADAMTS13Q76LX8 1427 aa18.17■□□□□ 0.5
SMAD7-202ENST00000545051 MFAP1P55081 439 aaKnown RBP18.17■□□□□ 0.5
SMAD7-202ENST00000545051 IPO8O15397 1037 aaKnown RBP18.16■□□□□ 0.5
SMAD7-202ENST00000545051 NOB1Q9ULX3 412 aaKnown RBP18.16■□□□□ 0.5
SMAD7-202ENST00000545051 NRXN3Q9Y4C0 1643 aa18.16■□□□□ 0.5
SMAD7-202ENST00000545051 SAFB2Q14151 953 aaKnown RBP eCLIP18.15■□□□□ 0.5
SMAD7-202ENST00000545051 CHMP5Q9NZZ3 219 aa18.15■□□□□ 0.5
SMAD7-202ENST00000545051 LRRC7Q96NW7 1537 aa18.15■□□□□ 0.5
SMAD7-202ENST00000545051 RIPK4P57078 832 aa18.14■□□□□ 0.49
SMAD7-202ENST00000545051 ALDH1L2Q3SY69 923 aa18.14■□□□□ 0.49
SMAD7-202ENST00000545051 ZNF335Q9H4Z2 1342 aaPredicted RBP18.14■□□□□ 0.49
SMAD7-202ENST00000545051 PNPLA6Q8IY17 1366 aa18.14■□□□□ 0.49
SMAD7-202ENST00000545051 PIK3R4Q99570 1358 aa18.14■□□□□ 0.49
SMAD7-202ENST00000545051 FYB1O15117 783 aa18.14■□□□□ 0.49
SMAD7-202ENST00000545051 DIAPH1O60610 1272 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms