RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 MYBBP1AQ9BQG0 1328 aaKnown RBP9.53□□□□□ -0.88
HMGCS2-204ENST00000544913 TRPM3Q9HCF6 1732 aaPredicted RBP9.53□□□□□ -0.88
HMGCS2-204ENST00000544913 PMFBP1Q8TBY8 1022 aa9.52□□□□□ -0.88
HMGCS2-204ENST00000544913 CGNL1Q0VF96 1302 aa9.52□□□□□ -0.89
HMGCS2-204ENST00000544913 KIF1AQ12756 1690 aa9.52□□□□□ -0.89
HMGCS2-204ENST00000544913 ADRA2BP18089 450 aa9.52□□□□□ -0.89
HMGCS2-204ENST00000544913 PPP2R1AP30153 589 aa9.52□□□□□ -0.89
HMGCS2-204ENST00000544913 CNGB1Q14028 1251 aaPredicted RBP9.52□□□□□ -0.89
HMGCS2-204ENST00000544913 HDGFL2Q7Z4V5 671 aaPredicted RBP9.52□□□□□ -0.89
HMGCS2-204ENST00000544913 NME9Q86XW9 330 aa9.52□□□□□ -0.89
HMGCS2-204ENST00000544913 ZRANB1Q9UGI0 708 aa9.52□□□□□ -0.89
HMGCS2-204ENST00000544913 PHF8Q9UPP1 1060 aa9.52□□□□□ -0.89
HMGCS2-204ENST00000544913 TTC21BQ7Z4L5 1316 aa9.52□□□□□ -0.89
HMGCS2-204ENST00000544913 MSH6P52701 1360 aa9.51□□□□□ -0.89
HMGCS2-204ENST00000544913 C14orf37Q86TY3 774 aa9.51□□□□□ -0.89
HMGCS2-204ENST00000544913 GGNBP2Q9H3C7 697 aa9.51□□□□□ -0.89
HMGCS2-204ENST00000544913 BRD4O60885 1362 aaPredicted RBP9.51□□□□□ -0.89
HMGCS2-204ENST00000544913 ZNF692Q9BU19 519 aaPredicted RBP9.5□□□□□ -0.89
HMGCS2-204ENST00000544913 CADPS2Q86UW7 1296 aa9.5□□□□□ -0.89
HMGCS2-204ENST00000544913 USP31Q70CQ4 1352 aa9.5□□□□□ -0.89
HMGCS2-204ENST00000544913 COL3A1P02461 1466 aaPredicted RBP9.49□□□□□ -0.89
HMGCS2-204ENST00000544913 PXDNQ92626 1479 aa9.49□□□□□ -0.89
HMGCS2-204ENST00000544913 NLRP13Q86W25 1043 aa9.49□□□□□ -0.89
HMGCS2-204ENST00000544913 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.49□□□□□ -0.89
HMGCS2-204ENST00000544913 SMG6Q86US8 1419 aaKnown RBP9.49□□□□□ -0.89
HMGCS2-204ENST00000544913 ESCO1Q5FWF5 840 aa9.48□□□□□ -0.89
HMGCS2-204ENST00000544913 ALS2Q96Q42 1657 aa9.48□□□□□ -0.89
HMGCS2-204ENST00000544913 SHPRHQ149N8 1683 aa9.48□□□□□ -0.89
HMGCS2-204ENST00000544913 ATF3P18847 181 aa9.48□□□□□ -0.89
HMGCS2-204ENST00000544913 BRINP3Q76B58 766 aa9.48□□□□□ -0.89
HMGCS2-204ENST00000544913 TTC21AQ8NDW8 1320 aa9.48□□□□□ -0.89
HMGCS2-204ENST00000544913 NGDNQ8NEJ9 315 aaKnown RBP9.47□□□□□ -0.89
HMGCS2-204ENST00000544913 PNISRQ8TF01 805 aaKnown RBP9.47□□□□□ -0.89
HMGCS2-204ENST00000544913 MRS2Q9HD23 443 aa9.47□□□□□ -0.89
HMGCS2-204ENST00000544913 FOXO3O43524 673 aa9.46□□□□□ -0.89
HMGCS2-204ENST00000544913 FBLN1P23142 703 aa9.46□□□□□ -0.89
HMGCS2-204ENST00000544913 MORC1Q86VD1 984 aa9.46□□□□□ -0.89
HMGCS2-204ENST00000544913 DDX17Q92841 729 aaKnown RBP9.46□□□□□ -0.89
HMGCS2-204ENST00000544913 AATKQ6ZMQ8 1374 aa9.46□□□□□ -0.89
HMGCS2-204ENST00000544913 NHSL1Q5SYE7 1610 aa9.46□□□□□ -0.89
HMGCS2-204ENST00000544913 PEAK1Q9H792 1746 aa9.46□□□□□ -0.89
HMGCS2-204ENST00000544913 NFAT5O94916 1531 aa9.46□□□□□ -0.9
HMGCS2-204ENST00000544913 PNPLA6Q8IY17 1366 aa9.46□□□□□ -0.9
HMGCS2-204ENST00000544913 SLAIN2Q9P270 581 aa9.46□□□□□ -0.9
HMGCS2-204ENST00000544913 SLIT3O75094 1523 aa9.45□□□□□ -0.9
HMGCS2-204ENST00000544913 XPCQ01831 940 aaPredicted RBP9.45□□□□□ -0.9
HMGCS2-204ENST00000544913 CRYBG1Q9Y4K1 1723 aa9.45□□□□□ -0.9
HMGCS2-204ENST00000544913 MED1Q15648 1581 aaPredicted RBP9.45□□□□□ -0.9
HMGCS2-204ENST00000544913 INSRP06213 1382 aa9.45□□□□□ -0.9
HMGCS2-204ENST00000544913 TNNT2P45379 298 aaPredicted RBP9.44□□□□□ -0.9
HMGCS2-204ENST00000544913 SBNO1A3KN83 1393 aa9.44□□□□□ -0.9
HMGCS2-204ENST00000544913 USP19O94966 1318 aa9.44□□□□□ -0.9
HMGCS2-204ENST00000544913 POLKQ9UBT6 870 aa9.44□□□□□ -0.9
HMGCS2-204ENST00000544913 ROBO1Q9Y6N7 1651 aa9.43□□□□□ -0.9
HMGCS2-204ENST00000544913 MTHFSP49914 203 aa9.43□□□□□ -0.9
HMGCS2-204ENST00000544913 MAP2P11137 1827 aaKnown RBP9.43□□□□□ -0.9
HMGCS2-204ENST00000544913 CDK12Q9NYV4 1490 aaPredicted RBP9.43□□□□□ -0.9
HMGCS2-204ENST00000544913 AHDC1Q5TGY3 1603 aaPredicted RBP9.43□□□□□ -0.9
HMGCS2-204ENST00000544913 SOS2Q07890 1332 aaPredicted RBP9.43□□□□□ -0.9
HMGCS2-204ENST00000544913 KRT28Q7Z3Y7 464 aa9.43□□□□□ -0.9
HMGCS2-204ENST00000544913 BLMP54132 1417 aaPredicted RBP9.42□□□□□ -0.9
HMGCS2-204ENST00000544913 TNS3Q68CZ2 1445 aa9.42□□□□□ -0.9
HMGCS2-204ENST00000544913 PSME1Q06323 249 aa9.42□□□□□ -0.9
HMGCS2-204ENST00000544913 COG3Q96JB2 828 aa9.42□□□□□ -0.9
HMGCS2-204ENST00000544913 EMILIN1Q9Y6C2 1016 aa9.42□□□□□ -0.9
HMGCS2-204ENST00000544913 IQSEC2Q5JU85 1478 aa9.42□□□□□ -0.9
HMGCS2-204ENST00000544913 PHRF1Q9P1Y6 1649 aaKnown RBP9.42□□□□□ -0.9
HMGCS2-204ENST00000544913 NPHP3Q7Z494 1330 aa9.41□□□□□ -0.9
HMGCS2-204ENST00000544913 SPATA31A3Q5VYP0 1347 aa9.41□□□□□ -0.9
HMGCS2-204ENST00000544913 RRS1Q15050 365 aaKnown RBP9.41□□□□□ -0.9
HMGCS2-204ENST00000544913 NUTM2GQ5VZR2 741 aa9.41□□□□□ -0.9
HMGCS2-204ENST00000544913 MAP3K19Q56UN5 1328 aa9.4□□□□□ -0.9
HMGCS2-204ENST00000544913 NLRP6P59044 892 aa9.4□□□□□ -0.9
HMGCS2-204ENST00000544913 ABTB2Q8N961 1025 aa9.4□□□□□ -0.9
HMGCS2-204ENST00000544913 RGPD1P0DJD0 1748 aa9.39□□□□□ -0.91
HMGCS2-204ENST00000544913 ABCA3Q99758 1704 aa9.39□□□□□ -0.91
HMGCS2-204ENST00000544913 FAM9BQ8IZU0 186 aa9.39□□□□□ -0.91
HMGCS2-204ENST00000544913 PIAS4Q8N2W9 510 aaPredicted RBP9.39□□□□□ -0.91
HMGCS2-204ENST00000544913 COL16A1Q07092 1604 aaPredicted RBP9.39□□□□□ -0.91
HMGCS2-204ENST00000544913 PAK3O75914 559 aaPredicted RBP9.39□□□□□ -0.91
HMGCS2-204ENST00000544913 ADAMTS8Q9UP79 889 aa9.39□□□□□ -0.91
HMGCS2-204ENST00000544913 LTN1O94822 1766 aa9.38□□□□□ -0.91
HMGCS2-204ENST00000544913 COL18A1P39060 1754 aa9.37□□□□□ -0.91
HMGCS2-204ENST00000544913 IL13P35225 146 aa9.37□□□□□ -0.91
HMGCS2-204ENST00000544913 ARHGEF10O15013 1369 aa9.36□□□□□ -0.91
HMGCS2-204ENST00000544913 FLT4P35916 1363 aa9.36□□□□□ -0.91
HMGCS2-204ENST00000544913 KIF24Q5T7B8 1368 aa9.36□□□□□ -0.91
HMGCS2-204ENST00000544913 COL22A1Q8NFW1 1626 aaPredicted RBP9.36□□□□□ -0.91
HMGCS2-204ENST00000544913 GCP02774 474 aa9.36□□□□□ -0.91
HMGCS2-204ENST00000544913 NEFLP07196 543 aa9.36□□□□□ -0.91
HMGCS2-204ENST00000544913 HSP90AB2PQ58FF8 381 aa9.36□□□□□ -0.91
HMGCS2-204ENST00000544913 SUPT16HQ9Y5B9 1047 aaKnown RBP9.36□□□□□ -0.91
HMGCS2-204ENST00000544913 RTL1A6NKG5 1358 aa9.35□□□□□ -0.91
HMGCS2-204ENST00000544913 SOX12O15370 315 aa9.35□□□□□ -0.91
HMGCS2-204ENST00000544913 ARHGEF25Q86VW2 580 aa9.35□□□□□ -0.91
HMGCS2-204ENST00000544913 CERKQ8TCT0 537 aa9.35□□□□□ -0.91
HMGCS2-204ENST00000544913 HOXC9P31274 260 aa9.35□□□□□ -0.91
HMGCS2-204ENST00000544913 EIF4A2Q14240 407 aaKnown RBP9.35□□□□□ -0.91
HMGCS2-204ENST00000544913 CABLES1Q8TDN4 633 aa9.35□□□□□ -0.91
HMGCS2-204ENST00000544913 CPDO75976 1380 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms