RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 CABLES1Q8TDN4 633 aa11.17□□□□□ -0.62
CIT-215ENST00000544800 ZNF526Q8TF50 670 aaPredicted RBP11.17□□□□□ -0.62
CIT-215ENST00000544800 BCL11BQ9C0K0 894 aaPredicted RBP11.17□□□□□ -0.62
CIT-215ENST00000544800 NEXMIFQ5QGS0 1516 aa11.17□□□□□ -0.62
CIT-215ENST00000544800 METP08581 1390 aa11.16□□□□□ -0.62
CIT-215ENST00000544800 PCNTO95613 3336 aa11.16□□□□□ -0.62
CIT-215ENST00000544800 NALCNQ8IZF0 1738 aa11.16□□□□□ -0.62
CIT-215ENST00000544800 KIF3CO14782 793 aa11.16□□□□□ -0.62
CIT-215ENST00000544800 MYCNP04198 464 aaPredicted RBP11.16□□□□□ -0.62
CIT-215ENST00000544800 SLC4A1APQ9BWU0 796 aaKnown RBP11.16□□□□□ -0.62
CIT-215ENST00000544800 PLCH1Q4KWH8 1693 aa11.15□□□□□ -0.62
CIT-215ENST00000544800 PDE3BQ13370 1112 aa11.15□□□□□ -0.62
CIT-215ENST00000544800 CEP162Q5TB80 1403 aa11.14□□□□□ -0.63
CIT-215ENST00000544800 THSD7AQ9UPZ6 1657 aa11.14□□□□□ -0.63
CIT-215ENST00000544800 TNS2Q63HR2 1409 aa11.13□□□□□ -0.63
CIT-215ENST00000544800 ERBINQ96RT1 1412 aa11.13□□□□□ -0.63
CIT-215ENST00000544800 STK32BQ9NY57 414 aa11.13□□□□□ -0.63
CIT-215ENST00000544800 MYO5BQ9ULV0 1848 aa11.13□□□□□ -0.63
CIT-215ENST00000544800 C11orf95C9JLR9 678 aaPredicted RBP11.12□□□□□ -0.63
CIT-215ENST00000544800 TOMM70O94826 608 aa11.12□□□□□ -0.63
CIT-215ENST00000544800 KRT28Q7Z3Y7 464 aa11.12□□□□□ -0.63
CIT-215ENST00000544800 PLEKHG5O94827 1062 aa11.11□□□□□ -0.63
CIT-215ENST00000544800 SLC15A2Q16348 729 aa11.11□□□□□ -0.63
CIT-215ENST00000544800 POTEHQ6S545 545 aa11.11□□□□□ -0.63
CIT-215ENST00000544800 ADCY9O60503 1353 aa11.11□□□□□ -0.63
CIT-215ENST00000544800 CROCC2H7BZ55 1655 aa11.11□□□□□ -0.63
CIT-215ENST00000544800 YBX3P16989 372 aaKnown RBP eCLIP11.1□□□□□ -0.63
CIT-215ENST00000544800 KIF15Q9NS87 1388 aa11.1□□□□□ -0.63
CIT-215ENST00000544800 GCC2Q8IWJ2 1684 aa11.1□□□□□ -0.63
CIT-215ENST00000544800 HSPA1AP0DMV8 641 aaKnown RBP11.09□□□□□ -0.63
CIT-215ENST00000544800 HSPA1BP0DMV9 641 aaKnown RBP11.09□□□□□ -0.63
CIT-215ENST00000544800 KLHL34Q8N239 644 aa11.09□□□□□ -0.63
CIT-215ENST00000544800 RRP7BPQ9NSQ0 103 aa11.09□□□□□ -0.63
CIT-215ENST00000544800 SPATA31A1Q5TZJ5 1347 aa11.09□□□□□ -0.63
CIT-215ENST00000544800 HTRA3P83110 453 aa11.08□□□□□ -0.64
CIT-215ENST00000544800 MLLT1Q03111 559 aaPredicted RBP11.08□□□□□ -0.64
CIT-215ENST00000544800 PSME1Q06323 249 aa11.08□□□□□ -0.64
CIT-215ENST00000544800 PROM2Q8N271 834 aa11.08□□□□□ -0.64
CIT-215ENST00000544800 CCDC144AA2RUR9 1427 aa11.08□□□□□ -0.64
CIT-215ENST00000544800 RRBP1Q9P2E9 1410 aaKnown RBP11.07□□□□□ -0.64
CIT-215ENST00000544800 POLA2Q14181 598 aa11.06□□□□□ -0.64
CIT-215ENST00000544800 LMOD2Q6P5Q4 547 aa11.06□□□□□ -0.64
CIT-215ENST00000544800 TNS3Q68CZ2 1445 aa11.06□□□□□ -0.64
CIT-215ENST00000544800 NRAPQ86VF7 1730 aa11.06□□□□□ -0.64
CIT-215ENST00000544800 ROBO2Q9HCK4 1378 aa11.05□□□□□ -0.64
CIT-215ENST00000544800 NLGN2Q8NFZ4 835 aa11.05□□□□□ -0.64
CIT-215ENST00000544800 ARHGEF10O15013 1369 aa11.04□□□□□ -0.64
CIT-215ENST00000544800 BARGINQ6ZT62 677 aa11.04□□□□□ -0.64
CIT-215ENST00000544800 NRXN3Q9Y4C0 1643 aa11.04□□□□□ -0.64
CIT-215ENST00000544800 WDR90Q96KV7 1748 aa11.04□□□□□ -0.64
CIT-215ENST00000544800 POLD1P28340 1107 aa11.03□□□□□ -0.64
CIT-215ENST00000544800 FOXD4L1Q9NU39 408 aa11.03□□□□□ -0.64
CIT-215ENST00000544800 HFM1A2PYH4 1435 aa11.02□□□□□ -0.64
CIT-215ENST00000544800 NUTM2FA1L443 756 aa11.02□□□□□ -0.65
CIT-215ENST00000544800 RGPD3A6NKT7 1758 aaPredicted RBP11.02□□□□□ -0.65
CIT-215ENST00000544800 RGPD4Q7Z3J3 1758 aa11.02□□□□□ -0.65
CIT-215ENST00000544800 SBNO1A3KN83 1393 aa11.02□□□□□ -0.65
CIT-215ENST00000544800 RGS19P49795 217 aa11.01□□□□□ -0.65
CIT-215ENST00000544800 RBM46Q8TBY0 533 aaKnown RBP11.01□□□□□ -0.65
CIT-215ENST00000544800 TXNRD1Q16881 649 aa11□□□□□ -0.65
CIT-215ENST00000544800 USP19O94966 1318 aa11□□□□□ -0.65
CIT-215ENST00000544800 DHX57Q6P158 1386 aaKnown RBP11□□□□□ -0.65
CIT-215ENST00000544800 COL14A1Q05707 1796 aaKnown RBP11□□□□□ -0.65
CIT-215ENST00000544800 FSTL1Q12841 308 aa10.99□□□□□ -0.65
CIT-215ENST00000544800 SLC16A10Q8TF71 515 aa10.99□□□□□ -0.65
CIT-215ENST00000544800 USP35Q9P2H5 1018 aa10.99□□□□□ -0.65
CIT-215ENST00000544800 STRN4Q9NRL3 753 aa10.98□□□□□ -0.65
CIT-215ENST00000544800 CDC42BPGQ6DT37 1551 aa10.98□□□□□ -0.65
CIT-215ENST00000544800 PRDM11Q9NQV5 511 aa10.97□□□□□ -0.65
CIT-215ENST00000544800 PRDM10Q9NQV6 1147 aa10.97□□□□□ -0.65
CIT-215ENST00000544800 PRAG1Q86YV5 1406 aa10.97□□□□□ -0.65
CIT-215ENST00000544800 TECPR2O15040 1411 aa10.96□□□□□ -0.65
CIT-215ENST00000544800 MYOM3Q5VTT5 1437 aa10.96□□□□□ -0.65
CIT-215ENST00000544800 ZNF326Q5BKZ1 582 aaKnown RBP10.96□□□□□ -0.65
CIT-215ENST00000544800 PMFBP1Q8TBY8 1022 aa10.96□□□□□ -0.65
CIT-215ENST00000544800 OVOS2A0A0G2JMS6 1433 aa10.95□□□□□ -0.66
CIT-215ENST00000544800 OVOS2A0A0J9YW53 1432 aa10.95□□□□□ -0.66
CIT-215ENST00000544800 OVOS2Q6IE36 1432 aa10.95□□□□□ -0.66
CIT-215ENST00000544800 PTF1AQ7RTS3 328 aa10.95□□□□□ -0.66
CIT-215ENST00000544800 TCP11L2Q8N4U5 519 aa10.95□□□□□ -0.66
CIT-215ENST00000544800 ABHD8Q96I13 439 aa10.95□□□□□ -0.66
CIT-215ENST00000544800 PHF8Q9UPP1 1060 aa10.95□□□□□ -0.66
CIT-215ENST00000544800 C16orf71Q8IYS4 520 aaPredicted RBP10.94□□□□□ -0.66
CIT-215ENST00000544800 ABCA3Q99758 1704 aa10.94□□□□□ -0.66
CIT-215ENST00000544800 NAIPQ13075 1403 aa10.93□□□□□ -0.66
CIT-215ENST00000544800 EVA1CP58658 441 aa10.93□□□□□ -0.66
CIT-215ENST00000544800 THRAP3Q9Y2W1 955 aaKnown RBP10.93□□□□□ -0.66
CIT-215ENST00000544800 KIF1AQ12756 1690 aa10.92□□□□□ -0.66
CIT-215ENST00000544800 ZBTB22O15209 634 aa10.92□□□□□ -0.66
CIT-215ENST00000544800 RBM42Q9BTD8 480 aaKnown RBP10.91□□□□□ -0.66
CIT-215ENST00000544800 NMRK2Q9NPI5 230 aa10.91□□□□□ -0.66
CIT-215ENST00000544800 IQGAP3Q86VI3 1631 aa10.9□□□□□ -0.66
CIT-215ENST00000544800 ARHGEF28Q8N1W1 1705 aaKnown RBP10.89□□□□□ -0.67
CIT-215ENST00000544800 KIAA1210Q9ULL0 1709 aa10.89□□□□□ -0.67
CIT-215ENST00000544800 ANKRD30AQ9BXX3 1397 aa10.89□□□□□ -0.67
CIT-215ENST00000544800 TULP4Q9NRJ4 1543 aa10.89□□□□□ -0.67
CIT-215ENST00000544800 PDE4DIPQ5VU43 2346 aa10.89□□□□□ -0.67
CIT-215ENST00000544800 CHRNA2Q15822 529 aa10.88□□□□□ -0.67
CIT-215ENST00000544800 FOXN1O15353 648 aa10.87□□□□□ -0.67
CIT-215ENST00000544800 LARP1Q6PKG0 1096 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms