RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 C22orf23Q9BZE7 217 aa23.89■■□□□ 1.42
BPTF-208ENST00000544778 RUNDC1Q96C34 613 aa23.89■■□□□ 1.42
BPTF-208ENST00000544778 ABCC8Q09428 1581 aa23.89■■□□□ 1.41
BPTF-208ENST00000544778 NACADO15069 1562 aa23.89■■□□□ 1.41
BPTF-208ENST00000544778 CENPHQ9H3R5 247 aa23.89■■□□□ 1.41
BPTF-208ENST00000544778 PRDM2Q13029 1718 aa23.88■■□□□ 1.41
BPTF-208ENST00000544778 TAX1BP1Q86VP1 789 aa23.88■■□□□ 1.41
BPTF-208ENST00000544778 GNL3LQ9NVN8 582 aaKnown RBP23.88■■□□□ 1.41
BPTF-208ENST00000544778 NUTM2BA6NNL0 878 aaPredicted RBP23.87■■□□□ 1.41
BPTF-208ENST00000544778 NUTM2EB1AL46 878 aaPredicted RBP23.87■■□□□ 1.41
BPTF-208ENST00000544778 CCDC181Q5TID7 509 aa23.87■■□□□ 1.41
BPTF-208ENST00000544778 NUTM2AQ8IVF1 878 aaPredicted RBP23.87■■□□□ 1.41
BPTF-208ENST00000544778 PDS5BQ9NTI5 1447 aa23.87■■□□□ 1.41
BPTF-208ENST00000544778 NASPP49321 788 aaPredicted RBP23.86■■□□□ 1.41
BPTF-208ENST00000544778 SPC24Q8NBT2 197 aa23.86■■□□□ 1.41
BPTF-208ENST00000544778 GBP2P32456 591 aaPredicted RBP23.85■■□□□ 1.41
BPTF-208ENST00000544778 CCDC158Q5M9N0 1113 aa23.85■■□□□ 1.41
BPTF-208ENST00000544778 LEKR1Q6ZMV7 388 aa23.85■■□□□ 1.41
BPTF-208ENST00000544778 CLASRPQ8N2M8 674 aaKnown RBP23.85■■□□□ 1.41
BPTF-208ENST00000544778 SERPINC1P01008 464 aa23.84■■□□□ 1.41
BPTF-208ENST00000544778 ZSCAN29Q8IWY8 852 aaPredicted RBP23.84■■□□□ 1.41
BPTF-208ENST00000544778 SURF6O75683 361 aaKnown RBP23.84■■□□□ 1.41
BPTF-208ENST00000544778 BAZ1AQ9NRL2 1556 aaPredicted RBP23.84■■□□□ 1.41
BPTF-208ENST00000544778 CHMP4BP1P59074 171 aa23.84■■□□□ 1.41
BPTF-208ENST00000544778 ZNF396Q96N95 335 aaPredicted RBP23.84■■□□□ 1.41
BPTF-208ENST00000544778 STK3Q13188 491 aa23.83■■□□□ 1.41
BPTF-208ENST00000544778 CCDC69A6NI79 296 aa23.83■■□□□ 1.41
BPTF-208ENST00000544778 CDC45O75419 566 aa23.83■■□□□ 1.41
BPTF-208ENST00000544778 LETM1O95202 739 aaPredicted RBP23.83■■□□□ 1.41
BPTF-208ENST00000544778 ABTB2Q8N961 1025 aa23.83■■□□□ 1.41
BPTF-208ENST00000544778 STIM1Q13586 685 aa23.82■■□□□ 1.4
BPTF-208ENST00000544778 STK38Q15208 465 aa23.82■■□□□ 1.4
BPTF-208ENST00000544778 SSR1P43307 286 aaKnown RBP23.82■■□□□ 1.4
BPTF-208ENST00000544778 NUP133Q8WUM0 1156 aa23.82■■□□□ 1.4
BPTF-208ENST00000544778 USP47Q96K76 1375 aa23.82■■□□□ 1.4
BPTF-208ENST00000544778 CCP110O43303 1012 aa23.81■■□□□ 1.4
BPTF-208ENST00000544778 CCDC30Q5VVM6 783 aa23.81■■□□□ 1.4
BPTF-208ENST00000544778 DESP17661 470 aa23.81■■□□□ 1.4
BPTF-208ENST00000544778 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.81■■□□□ 1.49e-7■■■■□ 21.2
BPTF-208ENST00000544778 FHOD3Q2V2M9 1422 aa23.81■■□□□ 1.4
BPTF-208ENST00000544778 NLRP6P59044 892 aa23.81■■□□□ 1.4
BPTF-208ENST00000544778 EZRP15311 586 aaKnown RBP23.81■■□□□ 1.4
BPTF-208ENST00000544778 CAVIN1Q6NZI2 390 aaKnown RBP23.81■■□□□ 1.4
BPTF-208ENST00000544778 ESCO1Q5FWF5 840 aa23.8■■□□□ 1.4
BPTF-208ENST00000544778 SOGA3Q5TF21 947 aa23.8■■□□□ 1.4
BPTF-208ENST00000544778 PANK1Q8TE04 598 aa23.8■■□□□ 1.4
BPTF-208ENST00000544778 PPFIBP1Q86W92 1011 aa23.8■■□□□ 1.4
BPTF-208ENST00000544778 LUC7LQ9NQ29 371 aaKnown RBP23.8■■□□□ 1.4
BPTF-208ENST00000544778 SSBP05455 408 aaKnown RBP eCLIP23.79■■□□□ 1.4
BPTF-208ENST00000544778 ZNF76P36508 570 aa23.79■■□□□ 1.4
BPTF-208ENST00000544778 FAM177A1Q8N128 213 aaPredicted RBP23.79■■□□□ 1.4
BPTF-208ENST00000544778 FAM193AP78312 1265 aa23.79■■□□□ 1.4
BPTF-208ENST00000544778 TSPY26PQ9H489 355 aa23.79■■□□□ 1.4
BPTF-208ENST00000544778 PIP4K2AP48426 406 aaPredicted RBP23.79■■□□□ 1.4
BPTF-208ENST00000544778 ERC1Q8IUD2 1116 aa23.79■■□□□ 1.4
BPTF-208ENST00000544778 CABP2Q9NPB3 220 aa23.78■■□□□ 1.4
BPTF-208ENST00000544778 MAP4K4O95819 1239 aaPredicted RBP23.78■■□□□ 1.4
BPTF-208ENST00000544778 SIL1Q9H173 461 aa23.78■■□□□ 1.4
BPTF-208ENST00000544778 HIP1O00291 1037 aa23.77■■□□□ 1.4
BPTF-208ENST00000544778 GGNBP2Q9H3C7 697 aa23.77■■□□□ 1.4
BPTF-208ENST00000544778 PIBF1Q8WXW3 757 aa23.77■■□□□ 1.4
BPTF-208ENST00000544778 CECR2Q9BXF3 1484 aa23.77■■□□□ 1.4
BPTF-208ENST00000544778 SPDYE4A6NLX3 237 aa23.76■■□□□ 1.39
BPTF-208ENST00000544778 MIA2Q96PC5 1412 aa23.76■■□□□ 1.39
BPTF-208ENST00000544778 DDX54Q8TDD1 881 aaKnown RBP23.76■■□□□ 1.39
BPTF-208ENST00000544778 KIAA0754O94854 1291 aa23.76■■□□□ 1.39
BPTF-208ENST00000544778 SMG6Q86US8 1419 aaKnown RBP23.76■■□□□ 1.39
BPTF-208ENST00000544778 FIBPO43427 364 aa23.75■■□□□ 1.39
BPTF-208ENST00000544778 JPH4Q96JJ6 628 aa23.75■■□□□ 1.39
BPTF-208ENST00000544778 KIF7Q2M1P5 1343 aa23.75■■□□□ 1.39
BPTF-208ENST00000544778 TRIM22Q8IYM9 498 aa23.75■■□□□ 1.39
BPTF-208ENST00000544778 GPRASP1Q5JY77 1395 aa23.74■■□□□ 1.39
BPTF-208ENST00000544778 MYCNP04198 464 aaPredicted RBP23.74■■□□□ 1.39
BPTF-208ENST00000544778 TRIM21P19474 475 aaKnown RBP23.74■■□□□ 1.39
BPTF-208ENST00000544778 CABP4P57796 275 aa23.74■■□□□ 1.39
BPTF-208ENST00000544778 PRPF40AO75400 957 aaKnown RBP23.73■■□□□ 1.39
BPTF-208ENST00000544778 NEK4P51957 841 aa23.73■■□□□ 1.39
BPTF-208ENST00000544778 NACAP1Q9BZK3 213 aa23.73■■□□□ 1.39
BPTF-208ENST00000544778 GOLGA6L7A0A1B0GV03 622 aa23.73■■□□□ 1.39
BPTF-208ENST00000544778 MYL6BP14649 208 aa23.73■■□□□ 1.39
BPTF-208ENST00000544778 SPINK5Q9NQ38 1064 aaPredicted RBP23.73■■□□□ 1.39
BPTF-208ENST00000544778 ZBED9Q6R2W3 1325 aa23.73■■□□□ 1.39
BPTF-208ENST00000544778 USP5P45974 858 aa23.73■■□□□ 1.39
BPTF-208ENST00000544778 CCDC112Q8NEF3 446 aa23.73■■□□□ 1.39
BPTF-208ENST00000544778 C1orf115Q9H7X2 142 aa23.73■■□□□ 1.39
BPTF-208ENST00000544778 PLEKHO1Q53GL0 409 aaPredicted RBP23.72■■□□□ 1.39
BPTF-208ENST00000544778 MPHOSPH8Q99549 860 aa23.72■■□□□ 1.39
BPTF-208ENST00000544778 DACH1Q9UI36 760 aa23.72■■□□□ 1.39
BPTF-208ENST00000544778 DHX57Q6P158 1386 aaKnown RBP23.72■■□□□ 1.39
BPTF-208ENST00000544778 ME1P48163 572 aa23.71■■□□□ 1.39
BPTF-208ENST00000544778 FKBP4Q02790 459 aaKnown RBP eCLIP23.71■■□□□ 1.39
BPTF-208ENST00000544778 PDCP20941 246 aa23.71■■□□□ 1.39
BPTF-208ENST00000544778 LRRFIP2Q9Y608 721 aaKnown RBP23.71■■□□□ 1.39
BPTF-208ENST00000544778 JMYQ8N9B5 988 aa23.7■■□□□ 1.39
BPTF-208ENST00000544778 FAM69CQ0P6D2 419 aa23.7■■□□□ 1.38
BPTF-208ENST00000544778 TXLNBQ8N3L3 684 aa23.7■■□□□ 1.38
BPTF-208ENST00000544778 PIP4K2BP78356 416 aa23.69■■□□□ 1.38
BPTF-208ENST00000544778 HMGN5P82970 282 aaKnown RBP23.69■■□□□ 1.38
BPTF-208ENST00000544778 SCLT1Q96NL6 688 aa23.69■■□□□ 1.38
BPTF-208ENST00000544778 RABEP1Q15276 862 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms