RNA–Protein interactions for RNA: ENST00000544665.7

ITGAM-202, Transcript of integrin subunit alpha M, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ITGAM, Length 4,718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-202ENST00000544665 IL27Q8NEV9 243 aa17.41■□□□□ 0.38
ITGAM-202ENST00000544665 SSH1Q8WYL5 1049 aa17.41■□□□□ 0.38
ITGAM-202ENST00000544665 WAPLQ7Z5K2 1190 aa17.41■□□□□ 0.38
ITGAM-202ENST00000544665 CLASRPQ8N2M8 674 aaKnown RBP17.41■□□□□ 0.38
ITGAM-202ENST00000544665 RABEP1Q15276 862 aa17.4■□□□□ 0.38
ITGAM-202ENST00000544665 NFE2L2Q16236 605 aa17.4■□□□□ 0.38
ITGAM-202ENST00000544665 HDGFL1Q5TGJ6 251 aa17.4■□□□□ 0.38
ITGAM-202ENST00000544665 NKTRP30414 1462 aaKnown RBP17.39■□□□□ 0.37
ITGAM-202ENST00000544665 BICD2Q8TD16 824 aa17.39■□□□□ 0.37
ITGAM-202ENST00000544665 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.39■□□□□ 0.37
ITGAM-202ENST00000544665 CAVIN1Q6NZI2 390 aaKnown RBP17.39■□□□□ 0.37
ITGAM-202ENST00000544665 CREBRFQ8IUR6 639 aa17.39■□□□□ 0.37
ITGAM-202ENST00000544665 RASSF8Q8NHQ8 419 aa17.39■□□□□ 0.37
ITGAM-202ENST00000544665 RNF214Q8ND24 703 aa17.38■□□□□ 0.37
ITGAM-202ENST00000544665 NASPP49321 788 aaPredicted RBP17.38■□□□□ 0.37
ITGAM-202ENST00000544665 ESCO1Q5FWF5 840 aa17.38■□□□□ 0.37
ITGAM-202ENST00000544665 NEUROD6Q96NK8 337 aa17.38■□□□□ 0.37
ITGAM-202ENST00000544665 CCDC61Q9Y6R9 512 aa17.38■□□□□ 0.37
ITGAM-202ENST00000544665 LRRFIP1Q32MZ4 808 aaKnown RBP17.37■□□□□ 0.37
ITGAM-202ENST00000544665 CNTROBQ8N137 903 aa17.37■□□□□ 0.37
ITGAM-202ENST00000544665 ADGRL1O94910 1474 aa17.37■□□□□ 0.37
ITGAM-202ENST00000544665 SCAF11Q99590 1463 aaKnown RBP17.37■□□□□ 0.37
ITGAM-202ENST00000544665 APPP05067 770 aa17.37■□□□□ 0.37
ITGAM-202ENST00000544665 NUDT16Q96DE0 195 aaKnown RBP17.37■□□□□ 0.37
ITGAM-202ENST00000544665 CHMP4CQ96CF2 233 aa17.36■□□□□ 0.37
ITGAM-202ENST00000544665 NUP153P49790 1475 aaKnown RBP17.36■□□□□ 0.37
ITGAM-202ENST00000544665 CPLX1O14810 134 aa17.36■□□□□ 0.37
ITGAM-202ENST00000544665 FOSBP53539 338 aa17.36■□□□□ 0.37
ITGAM-202ENST00000544665 IDI1Q13907 227 aa17.36■□□□□ 0.37
ITGAM-202ENST00000544665 DCTN1Q14203 1278 aa17.36■□□□□ 0.37
ITGAM-202ENST00000544665 FAM43AQ8N2R8 423 aa17.36■□□□□ 0.37
ITGAM-202ENST00000544665 ZNF428Q96B54 188 aa17.36■□□□□ 0.37
ITGAM-202ENST00000544665 LRPPRCP42704 1394 aaKnown RBP17.36■□□□□ 0.37
ITGAM-202ENST00000544665 PRPF40AO75400 957 aaKnown RBP17.35■□□□□ 0.37
ITGAM-202ENST00000544665 CCT4P50991 539 aaKnown RBP17.35■□□□□ 0.37
ITGAM-202ENST00000544665 SYTL4Q96C24 671 aaPredicted RBP17.35■□□□□ 0.37
ITGAM-202ENST00000544665 CPLX2Q6PUV4 134 aaKnown RBP17.35■□□□□ 0.37
ITGAM-202ENST00000544665 FSD1Q9BTV5 496 aa17.35■□□□□ 0.37
ITGAM-202ENST00000544665 AMER1Q5JTC6 1135 aaPredicted RBP17.34■□□□□ 0.37
ITGAM-202ENST00000544665 GPRASP1Q5JY77 1395 aa17.34■□□□□ 0.37
ITGAM-202ENST00000544665 K7ELQ4 463 aaPredicted RBP17.34■□□□□ 0.37
ITGAM-202ENST00000544665 CD109Q6YHK3 1445 aa17.34■□□□□ 0.37
ITGAM-202ENST00000544665 PLEKHO1Q53GL0 409 aaPredicted RBP17.34■□□□□ 0.37
ITGAM-202ENST00000544665 ATF3P18847 181 aa17.33■□□□□ 0.37
ITGAM-202ENST00000544665 LRRCC1Q9C099 1032 aa17.33■□□□□ 0.37
ITGAM-202ENST00000544665 NOS1P29475 1434 aa17.33■□□□□ 0.36
ITGAM-202ENST00000544665 CCDC27Q2M243 656 aa17.33■□□□□ 0.36
ITGAM-202ENST00000544665 MIS18AQ9NYP9 233 aa17.33■□□□□ 0.36
ITGAM-202ENST00000544665 ATP10BO94823 1461 aa17.33■□□□□ 0.36
ITGAM-202ENST00000544665 NME9Q86XW9 330 aa17.32■□□□□ 0.36
ITGAM-202ENST00000544665 RALGAPBQ86X10 1494 aa17.32■□□□□ 0.36
ITGAM-202ENST00000544665 MCM10Q7L590 875 aa17.32■□□□□ 0.36
ITGAM-202ENST00000544665 EMILIN1Q9Y6C2 1016 aa17.32■□□□□ 0.36
ITGAM-202ENST00000544665 SYNE3Q6ZMZ3 975 aa17.32■□□□□ 0.36
ITGAM-202ENST00000544665 MCM4P33991 863 aa17.32■□□□□ 0.36
ITGAM-202ENST00000544665 FBXO31Q5XUX0 539 aaPredicted RBP17.32■□□□□ 0.36
ITGAM-202ENST00000544665 SRCIN1Q9C0H9 1055 aa17.31■□□□□ 0.36
ITGAM-202ENST00000544665 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.31■□□□□ 0.36
ITGAM-202ENST00000544665 MCM2P49736 904 aa17.31■□□□□ 0.36
ITGAM-202ENST00000544665 TRDNQ13061 729 aa17.31■□□□□ 0.36
ITGAM-202ENST00000544665 AKAP17AQ02040 695 aaKnown RBP17.3■□□□□ 0.36
ITGAM-202ENST00000544665 ZNF530Q6P9A1 599 aaPredicted RBP17.3■□□□□ 0.36
ITGAM-202ENST00000544665 THEMISQ8N1K5 641 aaPredicted RBP17.3■□□□□ 0.36
ITGAM-202ENST00000544665 FAM135AQ9P2D6 1515 aa17.3■□□□□ 0.36
ITGAM-202ENST00000544665 RAPGEF6Q8TEU7 1601 aa17.3■□□□□ 0.36
ITGAM-202ENST00000544665 TRIM27P14373 513 aa17.3■□□□□ 0.36
ITGAM-202ENST00000544665 IGHDP01880 384 aa17.29■□□□□ 0.36
ITGAM-202ENST00000544665 C14orf93Q9H972 538 aaKnown RBP17.29■□□□□ 0.36
ITGAM-202ENST00000544665 MAP4K4O95819 1239 aaPredicted RBP17.29■□□□□ 0.36
ITGAM-202ENST00000544665 RPAP2Q8IXW5 612 aaPredicted RBP17.29■□□□□ 0.36
ITGAM-202ENST00000544665 IL1RAPL2Q9NP60 686 aa17.29■□□□□ 0.36
ITGAM-202ENST00000544665 WASHC4Q2M389 1173 aa17.29■□□□□ 0.36
ITGAM-202ENST00000544665 FBXW7Q969H0 707 aa17.29■□□□□ 0.36
ITGAM-202ENST00000544665 MBD3O95983 291 aa17.29■□□□□ 0.36
ITGAM-202ENST00000544665 ZNF592Q92610 1267 aa17.28■□□□□ 0.36
ITGAM-202ENST00000544665 FAM13BQ9NYF5 915 aa17.28■□□□□ 0.36
ITGAM-202ENST00000544665 EXOC6BQ9Y2D4 811 aa17.28■□□□□ 0.36
ITGAM-202ENST00000544665 TCOF1Q13428 1488 aaKnown RBP17.28■□□□□ 0.36
ITGAM-202ENST00000544665 TRIM29Q14134 588 aa17.28■□□□□ 0.36
ITGAM-202ENST00000544665 ABCC11Q96J66 1382 aa17.28■□□□□ 0.36
ITGAM-202ENST00000544665 SASS6Q6UVJ0 657 aa17.28■□□□□ 0.36
ITGAM-202ENST00000544665 DNAJC2Q99543 621 aaKnown RBP17.28■□□□□ 0.36
ITGAM-202ENST00000544665 FIBPO43427 364 aa17.27■□□□□ 0.36
ITGAM-202ENST00000544665 PSMA5P28066 241 aa17.27■□□□□ 0.36
ITGAM-202ENST00000544665 PRAG1Q86YV5 1406 aa17.27■□□□□ 0.36
ITGAM-202ENST00000544665 CLSTN1O94985 981 aa17.27■□□□□ 0.36
ITGAM-202ENST00000544665 ALDH1L2Q3SY69 923 aa17.27■□□□□ 0.36
ITGAM-202ENST00000544665 PES1O00541 588 aaKnown RBP17.26■□□□□ 0.35
ITGAM-202ENST00000544665 SRGAP3O43295 1099 aa17.26■□□□□ 0.35
ITGAM-202ENST00000544665 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.26■□□□□ 0.35
ITGAM-202ENST00000544665 FANCAO15360 1455 aa17.26■□□□□ 0.35
ITGAM-202ENST00000544665 PARD3Q8TEW0 1356 aa17.26■□□□□ 0.35
ITGAM-202ENST00000544665 TESK2Q96S53 571 aa17.26■□□□□ 0.35
ITGAM-202ENST00000544665 IFT57Q9NWB7 429 aa17.26■□□□□ 0.35
ITGAM-202ENST00000544665 DHX29Q7Z478 1369 aaKnown RBP17.26■□□□□ 0.35
ITGAM-202ENST00000544665 CCDC73Q6ZRK6 1079 aa17.26■□□□□ 0.35
ITGAM-202ENST00000544665 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
ITGAM-202ENST00000544665 SIL1Q9H173 461 aa17.26■□□□□ 0.35
ITGAM-202ENST00000544665 RALYLQ86SE5 291 aaKnown RBP17.26■□□□□ 0.35
ITGAM-202ENST00000544665 NFXL1Q6ZNB6 911 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms