RNA–Protein interactions for RNA: ENST00000544643.5

CCDC189-209, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-209ENST00000544643 ITSN1Q15811 1721 aa26.41■■□□□ 1.82
CCDC189-209ENST00000544643 PNPLA6Q8IY17 1366 aa26.4■■□□□ 1.82
CCDC189-209ENST00000544643 TOPAZ1Q8N9V7 1692 aa26.4■■□□□ 1.82
CCDC189-209ENST00000544643 XRN1Q8IZH2 1706 aaKnown RBP26.4■■□□□ 1.82
CCDC189-209ENST00000544643 E9PSI1 815 aa26.38■■□□□ 1.81
CCDC189-209ENST00000544643 NCKAP5LQ9HCH0 1330 aa26.37■■□□□ 1.81
CCDC189-209ENST00000544643 PLEKHG3A1L390 1219 aa26.37■■□□□ 1.81
CCDC189-209ENST00000544643 U2AF1L5P0DN76 240 aaPredicted RBP26.37■■□□□ 1.81
CCDC189-209ENST00000544643 U2AF1Q01081 240 aaKnown RBP eCLIP26.37■■□□□ 1.81
CCDC189-209ENST00000544643 TCP11L2Q8N4U5 519 aa26.36■■□□□ 1.81
CCDC189-209ENST00000544643 WWC1Q8IX03 1113 aa26.35■■□□□ 1.81
CCDC189-209ENST00000544643 PHF23Q9BUL5 403 aaPredicted RBP26.35■■□□□ 1.81
CCDC189-209ENST00000544643 SETD1BQ9UPS6 1966 aaKnown RBP26.35■■□□□ 1.81
CCDC189-209ENST00000544643 CCDC27Q2M243 656 aa26.35■■□□□ 1.81
CCDC189-209ENST00000544643 ANKLE2Q86XL3 938 aa26.34■■□□□ 1.81
CCDC189-209ENST00000544643 B4GALNT3Q6L9W6 998 aa26.33■■□□□ 1.81
CCDC189-209ENST00000544643 AATKQ6ZMQ8 1374 aa26.33■■□□□ 1.81
CCDC189-209ENST00000544643 NME9Q86XW9 330 aa26.33■■□□□ 1.8
CCDC189-209ENST00000544643 NKTRP30414 1462 aaKnown RBP26.32■■□□□ 1.8
CCDC189-209ENST00000544643 DIAPH1O60610 1272 aaKnown RBP26.32■■□□□ 1.8
CCDC189-209ENST00000544643 TSHZ2Q9NRE2 1034 aa26.32■■□□□ 1.8
CCDC189-209ENST00000544643 POLKQ9UBT6 870 aa26.32■■□□□ 1.8
CCDC189-209ENST00000544643 SPINK5Q9NQ38 1064 aaPredicted RBP26.31■■□□□ 1.8
CCDC189-209ENST00000544643 WDR63Q8IWG1 891 aa26.3■■□□□ 1.8
CCDC189-209ENST00000544643 COG3Q96JB2 828 aa26.3■■□□□ 1.8
CCDC189-209ENST00000544643 NRKQ7Z2Y5 1582 aa26.29■■□□□ 1.8
CCDC189-209ENST00000544643 ACEP12821 1306 aa26.29■■□□□ 1.8
CCDC189-209ENST00000544643 U2SURPO15042 1029 aaKnown RBP26.28■■□□□ 1.8
CCDC189-209ENST00000544643 PLEKHF1Q96S99 279 aa26.28■■□□□ 1.8
CCDC189-209ENST00000544643 PNNQ9H307 717 aaKnown RBP26.28■■□□□ 1.8
CCDC189-209ENST00000544643 MAP2P11137 1827 aaKnown RBP26.28■■□□□ 1.8
CCDC189-209ENST00000544643 DMRT2Q9Y5R5 561 aa26.27■■□□□ 1.8
CCDC189-209ENST00000544643 KCNA6P17658 529 aa26.26■■□□□ 1.79
CCDC189-209ENST00000544643 USP6P35125 1406 aa26.26■■□□□ 1.79
CCDC189-209ENST00000544643 TTC21BQ7Z4L5 1316 aa26.26■■□□□ 1.79
CCDC189-209ENST00000544643 CCDC136Q96JN2 1154 aa26.25■■□□□ 1.79
CCDC189-209ENST00000544643 RRP7AQ9Y3A4 280 aaKnown RBP26.25■■□□□ 1.79
CCDC189-209ENST00000544643 CDK12Q9NYV4 1490 aaPredicted RBP26.25■■□□□ 1.79
CCDC189-209ENST00000544643 ANKARQ7Z5J8 1434 aa26.24■■□□□ 1.79
CCDC189-209ENST00000544643 NEUROD2Q15784 382 aa26.24■■□□□ 1.79
CCDC189-209ENST00000544643 ZRANB1Q9UGI0 708 aa26.24■■□□□ 1.79
CCDC189-209ENST00000544643 CHD2O14647 1828 aaKnown RBP26.24■■□□□ 1.79
CCDC189-209ENST00000544643 EXOC6Q8TAG9 804 aa26.23■■□□□ 1.79
CCDC189-209ENST00000544643 SSH2Q76I76 1423 aa26.22■■□□□ 1.79
CCDC189-209ENST00000544643 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.22■■□□□ 1.79
CCDC189-209ENST00000544643 NUTM2FA1L443 756 aa26.21■■□□□ 1.79
CCDC189-209ENST00000544643 FCHSD2O94868 740 aa26.21■■□□□ 1.79
CCDC189-209ENST00000544643 MAPK8IP3Q9UPT6 1336 aa26.21■■□□□ 1.79
CCDC189-209ENST00000544643 PLIN1O60240 522 aa26.2■■□□□ 1.79
CCDC189-209ENST00000544643 FBLN1P23142 703 aa26.2■■□□□ 1.79
CCDC189-209ENST00000544643 PPM1GO15355 546 aaPredicted RBP26.2■■□□□ 1.78
CCDC189-209ENST00000544643 TTC21AQ8NDW8 1320 aa26.19■■□□□ 1.78
CCDC189-209ENST00000544643 TMPOP42166 694 aaKnown RBP26.19■■□□□ 1.78
CCDC189-209ENST00000544643 EMILIN1Q9Y6C2 1016 aa26.19■■□□□ 1.78
CCDC189-209ENST00000544643 OVOS2A0A0J9YW53 1432 aa26.18■■□□□ 1.78
CCDC189-209ENST00000544643 OVOS2Q6IE36 1432 aa26.18■■□□□ 1.78
CCDC189-209ENST00000544643 FMN2Q9NZ56 1722 aa26.17■■□□□ 1.78
CCDC189-209ENST00000544643 IL13P35225 146 aa26.16■■□□□ 1.78
CCDC189-209ENST00000544643 NPHP4O75161 1426 aaPredicted RBP26.15■■□□□ 1.78
CCDC189-209ENST00000544643 RGPD8O14715 1765 aaPredicted RBP26.15■■□□□ 1.78
CCDC189-209ENST00000544643 NALCNQ8IZF0 1738 aa26.15■■□□□ 1.78
CCDC189-209ENST00000544643 RSPH6AQ9H0K4 717 aa26.15■■□□□ 1.78
CCDC189-209ENST00000544643 MYH16Q9H6N6 1097 aa26.15■■□□□ 1.78
CCDC189-209ENST00000544643 USP31Q70CQ4 1352 aa26.14■■□□□ 1.78
CCDC189-209ENST00000544643 LRRC7Q96NW7 1537 aa26.14■■□□□ 1.78
CCDC189-209ENST00000544643 CRBNQ96SW2 442 aa26.13■■□□□ 1.77
CCDC189-209ENST00000544643 NGDNQ8NEJ9 315 aaKnown RBP26.12■■□□□ 1.77
CCDC189-209ENST00000544643 PMFBP1Q8TBY8 1022 aa26.12■■□□□ 1.77
CCDC189-209ENST00000544643 TRIM35Q9UPQ4 493 aa26.12■■□□□ 1.77
CCDC189-209ENST00000544643 IL16Q14005 1332 aa26.11■■□□□ 1.77
CCDC189-209ENST00000544643 RRS1Q15050 365 aaKnown RBP26.11■■□□□ 1.77
CCDC189-209ENST00000544643 NEFMP07197 916 aa26.1■■□□□ 1.77
CCDC189-209ENST00000544643 PRKAR2BP31323 418 aa26.09■■□□□ 1.77
CCDC189-209ENST00000544643 C20orf194Q5TEA3 1177 aa26.09■■□□□ 1.77
CCDC189-209ENST00000544643 RIPK4P57078 832 aa26.08■■□□□ 1.77
CCDC189-209ENST00000544643 BCAR3O75815 825 aa26.07■■□□□ 1.76
CCDC189-209ENST00000544643 ADGRL3Q9HAR2 1447 aa26.06■■□□□ 1.76
CCDC189-209ENST00000544643 CT47B1P0C2W7 299 aaPredicted RBP26.05■■□□□ 1.76
CCDC189-209ENST00000544643 RARSP54136 660 aaKnown RBP26.03■■□□□ 1.76
CCDC189-209ENST00000544643 NFE2L2Q16236 605 aa26.03■■□□□ 1.76
CCDC189-209ENST00000544643 NWD1Q149M9 1564 aa26.03■■□□□ 1.76
CCDC189-209ENST00000544643 HMOX1P09601 288 aa26.02■■□□□ 1.76
CCDC189-209ENST00000544643 PIK3C2AO00443 1686 aa26.02■■□□□ 1.76
CCDC189-209ENST00000544643 PDE3AQ14432 1141 aa26.02■■□□□ 1.76
CCDC189-209ENST00000544643 FANCIQ9NVI1 1328 aa26.01■■□□□ 1.75
CCDC189-209ENST00000544643 USP54Q70EL1 1684 aa26■■□□□ 1.75
CCDC189-209ENST00000544643 PEAK1Q9H792 1746 aa26■■□□□ 1.75
CCDC189-209ENST00000544643 EIF4A2Q14240 407 aaKnown RBP26■■□□□ 1.75
CCDC189-209ENST00000544643 PHACTR3Q96KR7 559 aa26■■□□□ 1.75
CCDC189-209ENST00000544643 PHF8Q9UPP1 1060 aa25.99■■□□□ 1.75
CCDC189-209ENST00000544643 RBM19Q9Y4C8 960 aaKnown RBP25.97■■□□□ 1.75
CCDC189-209ENST00000544643 CALD1Q05682 793 aaKnown RBP25.96■■□□□ 1.75
CCDC189-209ENST00000544643 SBNO1A3KN83 1393 aa25.96■■□□□ 1.75
CCDC189-209ENST00000544643 MAP3K19Q56UN5 1328 aa25.95■■□□□ 1.75
CCDC189-209ENST00000544643 LMOD3Q0VAK6 560 aa25.95■■□□□ 1.74
CCDC189-209ENST00000544643 TSR2Q969E8 191 aaKnown RBP25.95■■□□□ 1.74
CCDC189-209ENST00000544643 RGPD1P0DJD0 1748 aa25.94■■□□□ 1.74
CCDC189-209ENST00000544643 FLT4P35916 1363 aa25.94■■□□□ 1.74
CCDC189-209ENST00000544643 CANXP27824 592 aaKnown RBP25.93■■□□□ 1.74
CCDC189-209ENST00000544643 NLRP6P59044 892 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms