RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 SALL2Q9Y467 1007 aaPredicted RBP16.87■□□□□ 0.29
PAAF1-214ENST00000544552 ITSN1Q15811 1721 aa16.86■□□□□ 0.29
PAAF1-214ENST00000544552 ANKARQ7Z5J8 1434 aa16.86■□□□□ 0.29
PAAF1-214ENST00000544552 AATKQ6ZMQ8 1374 aa16.85■□□□□ 0.29
PAAF1-214ENST00000544552 APAF1O14727 1248 aa16.85■□□□□ 0.29
PAAF1-214ENST00000544552 RUNDC1Q96C34 613 aa16.85■□□□□ 0.29
PAAF1-214ENST00000544552 ACEP12821 1306 aa16.84■□□□□ 0.29
PAAF1-214ENST00000544552 COL3A1P02461 1466 aaPredicted RBP16.84■□□□□ 0.29
PAAF1-214ENST00000544552 CCDC146Q8IYE0 955 aa16.84■□□□□ 0.29
PAAF1-214ENST00000544552 CDCA7LQ96GN5 454 aa16.84■□□□□ 0.29
PAAF1-214ENST00000544552 NWD1Q149M9 1564 aa16.83■□□□□ 0.29
PAAF1-214ENST00000544552 GOLGA2Q08379 1002 aa16.82■□□□□ 0.28
PAAF1-214ENST00000544552 NME9Q86XW9 330 aa16.82■□□□□ 0.28
PAAF1-214ENST00000544552 USP6P35125 1406 aa16.82■□□□□ 0.28
PAAF1-214ENST00000544552 COG3Q96JB2 828 aa16.81■□□□□ 0.28
PAAF1-214ENST00000544552 POLKQ9UBT6 870 aa16.81■□□□□ 0.28
PAAF1-214ENST00000544552 TTC21BQ7Z4L5 1316 aa16.81■□□□□ 0.28
PAAF1-214ENST00000544552 SSH2Q76I76 1423 aa16.81■□□□□ 0.28
PAAF1-214ENST00000544552 NKTRP30414 1462 aaKnown RBP16.81■□□□□ 0.28
PAAF1-214ENST00000544552 ZNF335Q9H4Z2 1342 aaPredicted RBP16.81■□□□□ 0.28
PAAF1-214ENST00000544552 NRKQ7Z2Y5 1582 aa16.8■□□□□ 0.28
PAAF1-214ENST00000544552 TRMT2AQ8IZ69 625 aaKnown RBP16.8■□□□□ 0.28
PAAF1-214ENST00000544552 RCAN3Q9UKA8 241 aa16.8■□□□□ 0.28
PAAF1-214ENST00000544552 TTC21AQ8NDW8 1320 aa16.79■□□□□ 0.28
PAAF1-214ENST00000544552 DIAPH1O60610 1272 aaKnown RBP16.79■□□□□ 0.28
PAAF1-214ENST00000544552 U2AF1L5P0DN76 240 aaPredicted RBP16.79■□□□□ 0.28
PAAF1-214ENST00000544552 U2AF1Q01081 240 aaKnown RBP eCLIP16.79■□□□□ 0.28
PAAF1-214ENST00000544552 SLFN5Q08AF3 891 aa16.79■□□□□ 0.28
PAAF1-214ENST00000544552 MAP2P11137 1827 aaKnown RBP16.78■□□□□ 0.28
PAAF1-214ENST00000544552 FMN2Q9NZ56 1722 aa16.78■□□□□ 0.28
PAAF1-214ENST00000544552 NUTM2FA1L443 756 aa16.78■□□□□ 0.28
PAAF1-214ENST00000544552 CCDC27Q2M243 656 aa16.78■□□□□ 0.28
PAAF1-214ENST00000544552 DUSP27Q5VZP5 1158 aa16.78■□□□□ 0.28
PAAF1-214ENST00000544552 PROSER2Q86WR7 435 aaPredicted RBP16.78■□□□□ 0.28
PAAF1-214ENST00000544552 PHF23Q9BUL5 403 aaPredicted RBP16.78■□□□□ 0.28
PAAF1-214ENST00000544552 IQSEC2Q5JU85 1478 aa16.78■□□□□ 0.28
PAAF1-214ENST00000544552 TCP11L2Q8N4U5 519 aa16.78■□□□□ 0.28
PAAF1-214ENST00000544552 PNNQ9H307 717 aaKnown RBP16.78■□□□□ 0.28
PAAF1-214ENST00000544552 E9PSI1 815 aa16.76■□□□□ 0.27
PAAF1-214ENST00000544552 WWC1Q8IX03 1113 aa16.76■□□□□ 0.27
PAAF1-214ENST00000544552 ZRANB1Q9UGI0 708 aa16.76■□□□□ 0.27
PAAF1-214ENST00000544552 CDK12Q9NYV4 1490 aaPredicted RBP16.76■□□□□ 0.27
PAAF1-214ENST00000544552 OVOS2A0A0J9YW53 1432 aa16.76■□□□□ 0.27
PAAF1-214ENST00000544552 OVOS2Q6IE36 1432 aa16.76■□□□□ 0.27
PAAF1-214ENST00000544552 ADGRL3Q9HAR2 1447 aa16.76■□□□□ 0.27
PAAF1-214ENST00000544552 PELP1Q8IZL8 1130 aaKnown RBP16.75■□□□□ 0.27
PAAF1-214ENST00000544552 NGDNQ8NEJ9 315 aaKnown RBP16.75■□□□□ 0.27
PAAF1-214ENST00000544552 PLEKHF1Q96S99 279 aa16.75■□□□□ 0.27
PAAF1-214ENST00000544552 PPP4R2Q9NY27 417 aa16.75■□□□□ 0.27
PAAF1-214ENST00000544552 NCOA3Q9Y6Q9 1424 aa16.75■□□□□ 0.27
PAAF1-214ENST00000544552 RGPD8O14715 1765 aaPredicted RBP16.75■□□□□ 0.27
PAAF1-214ENST00000544552 USP31Q70CQ4 1352 aa16.75■□□□□ 0.27
PAAF1-214ENST00000544552 STRCP1A6NGW2 1772 aa16.74■□□□□ 0.27
PAAF1-214ENST00000544552 FCHSD2O94868 740 aa16.74■□□□□ 0.27
PAAF1-214ENST00000544552 IRX6P78412 446 aaPredicted RBP16.74■□□□□ 0.27
PAAF1-214ENST00000544552 NALCNQ8IZF0 1738 aa16.74■□□□□ 0.27
PAAF1-214ENST00000544552 WDR63Q8IWG1 891 aa16.74■□□□□ 0.27
PAAF1-214ENST00000544552 PMFBP1Q8TBY8 1022 aa16.74■□□□□ 0.27
PAAF1-214ENST00000544552 U2SURPO15042 1029 aaKnown RBP16.73■□□□□ 0.27
PAAF1-214ENST00000544552 TMEM94Q12767 1356 aa16.73■□□□□ 0.27
PAAF1-214ENST00000544552 FBLN1P23142 703 aa16.72■□□□□ 0.27
PAAF1-214ENST00000544552 RRP1P56182 461 aaKnown RBP16.72■□□□□ 0.27
PAAF1-214ENST00000544552 EMILIN1Q9Y6C2 1016 aa16.72■□□□□ 0.27
PAAF1-214ENST00000544552 LRRC7Q96NW7 1537 aa16.71■□□□□ 0.27
PAAF1-214ENST00000544552 LTBP4Q8N2S1 1624 aa16.71■□□□□ 0.27
PAAF1-214ENST00000544552 C14orf37Q86TY3 774 aa16.71■□□□□ 0.27
PAAF1-214ENST00000544552 PPM1GO15355 546 aaPredicted RBP16.7■□□□□ 0.26
PAAF1-214ENST00000544552 IL13P35225 146 aa16.7■□□□□ 0.26
PAAF1-214ENST00000544552 RBM33Q96EV2 1170 aaKnown RBP16.7■□□□□ 0.26
PAAF1-214ENST00000544552 SPINK5Q9NQ38 1064 aaPredicted RBP16.69■□□□□ 0.26
PAAF1-214ENST00000544552 PHF8Q9UPP1 1060 aa16.69■□□□□ 0.26
PAAF1-214ENST00000544552 TMPOP42166 694 aaKnown RBP16.68■□□□□ 0.26
PAAF1-214ENST00000544552 C19orf44Q9H6X5 657 aa16.68■□□□□ 0.26
PAAF1-214ENST00000544552 MAPK8IP3Q9UPT6 1336 aa16.68■□□□□ 0.26
PAAF1-214ENST00000544552 RRS1Q15050 365 aaKnown RBP16.67■□□□□ 0.26
PAAF1-214ENST00000544552 RSPH6AQ9H0K4 717 aa16.67■□□□□ 0.26
PAAF1-214ENST00000544552 NEUROD2Q15784 382 aa16.67■□□□□ 0.26
PAAF1-214ENST00000544552 RRP7AQ9Y3A4 280 aaKnown RBP16.67■□□□□ 0.26
PAAF1-214ENST00000544552 MSH6P52701 1360 aa16.66■□□□□ 0.26
PAAF1-214ENST00000544552 USP54Q70EL1 1684 aa16.66■□□□□ 0.26
PAAF1-214ENST00000544552 NEFMP07197 916 aa16.65■□□□□ 0.26
PAAF1-214ENST00000544552 DCCP43146 1447 aa16.65■□□□□ 0.26
PAAF1-214ENST00000544552 PIK3C2AO00443 1686 aa16.64■□□□□ 0.25
PAAF1-214ENST00000544552 KIF24Q5T7B8 1368 aa16.64■□□□□ 0.25
PAAF1-214ENST00000544552 IL16Q14005 1332 aa16.63■□□□□ 0.25
PAAF1-214ENST00000544552 ATF3P18847 181 aa16.63■□□□□ 0.25
PAAF1-214ENST00000544552 PRKAR2BP31323 418 aa16.63■□□□□ 0.25
PAAF1-214ENST00000544552 NLRP6P59044 892 aa16.63■□□□□ 0.25
PAAF1-214ENST00000544552 CADPS2Q86UW7 1296 aa16.63■□□□□ 0.25
PAAF1-214ENST00000544552 MYH16Q9H6N6 1097 aa16.63■□□□□ 0.25
PAAF1-214ENST00000544552 TRIM35Q9UPQ4 493 aa16.63■□□□□ 0.25
PAAF1-214ENST00000544552 ESCO1Q5FWF5 840 aa16.62■□□□□ 0.25
PAAF1-214ENST00000544552 XIRP1Q702N8 1843 aaKnown RBP16.61■□□□□ 0.25
PAAF1-214ENST00000544552 RIPK4P57078 832 aa16.61■□□□□ 0.25
PAAF1-214ENST00000544552 EIF4A2Q14240 407 aaKnown RBP16.61■□□□□ 0.25
PAAF1-214ENST00000544552 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.61■□□□□ 0.25
PAAF1-214ENST00000544552 SBNO1A3KN83 1393 aa16.61■□□□□ 0.25
PAAF1-214ENST00000544552 MAP3K19Q56UN5 1328 aa16.6■□□□□ 0.25
PAAF1-214ENST00000544552 ABTB2Q8N961 1025 aa16.6■□□□□ 0.25
PAAF1-214ENST00000544552 FLT4P35916 1363 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms