RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 TERF2IPQ9NYB0 399 aa19.59■□□□□ 0.73
CHFR-223ENST00000544268 XRN1Q8IZH2 1706 aaKnown RBP19.59■□□□□ 0.73
CHFR-223ENST00000544268 CGNL1Q0VF96 1302 aa19.59■□□□□ 0.73
CHFR-223ENST00000544268 DUSP27Q5VZP5 1158 aa19.59■□□□□ 0.73
CHFR-223ENST00000544268 KCNA6P17658 529 aa19.57■□□□□ 0.72
CHFR-223ENST00000544268 PIK3R4Q99570 1358 aa19.57■□□□□ 0.72
CHFR-223ENST00000544268 DMRT2Q9Y5R5 561 aa19.57■□□□□ 0.72
CHFR-223ENST00000544268 ADGRB2O60241 1585 aa19.57■□□□□ 0.72
CHFR-223ENST00000544268 NUDT16Q96DE0 195 aaKnown RBP19.57■□□□□ 0.72
CHFR-223ENST00000544268 NCKAP5LQ9HCH0 1330 aa19.56■□□□□ 0.72
CHFR-223ENST00000544268 APAF1O14727 1248 aa19.56■□□□□ 0.72
CHFR-223ENST00000544268 NPHP4O75161 1426 aaPredicted RBP19.56■□□□□ 0.72
CHFR-223ENST00000544268 HDGFL2Q7Z4V5 671 aaPredicted RBP19.55■□□□□ 0.72
CHFR-223ENST00000544268 NPM2Q86SE8 214 aaKnown RBP19.55■□□□□ 0.72
CHFR-223ENST00000544268 PPIP5K1Q6PFW1 1433 aa19.55■□□□□ 0.72
CHFR-223ENST00000544268 PRR36Q9H6K5 1346 aa19.55■□□□□ 0.72
CHFR-223ENST00000544268 ZNF521Q96K83 1311 aa19.54■□□□□ 0.72
CHFR-223ENST00000544268 MORC1Q86VD1 984 aa19.54■□□□□ 0.72
CHFR-223ENST00000544268 ATP7BP35670 1465 aa19.53■□□□□ 0.72
CHFR-223ENST00000544268 CCDC61Q9Y6R9 512 aa19.53■□□□□ 0.72
CHFR-223ENST00000544268 CHD2O14647 1828 aaKnown RBP19.53■□□□□ 0.72
CHFR-223ENST00000544268 NUTM2FA1L443 756 aa19.52■□□□□ 0.71
CHFR-223ENST00000544268 NSD2O96028 1365 aa19.52■□□□□ 0.71
CHFR-223ENST00000544268 GOLGA2Q08379 1002 aa19.51■□□□□ 0.71
CHFR-223ENST00000544268 INSRP06213 1382 aa19.51■□□□□ 0.71
CHFR-223ENST00000544268 NEFMP07197 916 aa19.51■□□□□ 0.71
CHFR-223ENST00000544268 FYB1O15117 783 aa19.5■□□□□ 0.71
CHFR-223ENST00000544268 GGNBP2Q9H3C7 697 aa19.5■□□□□ 0.71
CHFR-223ENST00000544268 CPSF1Q10570 1443 aaKnown RBP19.49■□□□□ 0.71
CHFR-223ENST00000544268 CDC42BPGQ6DT37 1551 aa19.48■□□□□ 0.71
CHFR-223ENST00000544268 SLFN5Q08AF3 891 aa19.48■□□□□ 0.71
CHFR-223ENST00000544268 PDE4AP27815 886 aa19.47■□□□□ 0.71
CHFR-223ENST00000544268 BCAR3O75815 825 aa19.47■□□□□ 0.71
CHFR-223ENST00000544268 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.47■□□□□ 0.71
CHFR-223ENST00000544268 PPM1GO15355 546 aaPredicted RBP19.46■□□□□ 0.71
CHFR-223ENST00000544268 NEUROD2Q15784 382 aa19.46■□□□□ 0.71
CHFR-223ENST00000544268 RBM33Q96EV2 1170 aaKnown RBP19.46■□□□□ 0.71
CHFR-223ENST00000544268 RRP7AQ9Y3A4 280 aaKnown RBP19.46■□□□□ 0.71
CHFR-223ENST00000544268 TOPAZ1Q8N9V7 1692 aa19.45■□□□□ 0.7
CHFR-223ENST00000544268 HSPA2P54652 639 aa19.45■□□□□ 0.7
CHFR-223ENST00000544268 KIF20BQ96Q89 1820 aa19.44■□□□□ 0.7
CHFR-223ENST00000544268 EDC4Q6P2E9 1401 aaKnown RBP19.44■□□□□ 0.7
CHFR-223ENST00000544268 ANKRD26Q9UPS8 1709 aa19.43■□□□□ 0.7
CHFR-223ENST00000544268 AKAP12Q02952 1782 aa19.43■□□□□ 0.7
CHFR-223ENST00000544268 NKTRP30414 1462 aaKnown RBP19.43■□□□□ 0.7
CHFR-223ENST00000544268 TCERG1O14776 1098 aaKnown RBP19.43■□□□□ 0.7
CHFR-223ENST00000544268 ITSN1Q15811 1721 aa19.43■□□□□ 0.7
CHFR-223ENST00000544268 MON2Q7Z3U7 1717 aa19.43■□□□□ 0.7
CHFR-223ENST00000544268 PLEKHG3A1L390 1219 aa19.42■□□□□ 0.7
CHFR-223ENST00000544268 MTHFSP49914 203 aa19.42■□□□□ 0.7
CHFR-223ENST00000544268 POLR3AO14802 1390 aaPredicted RBP19.42■□□□□ 0.7
CHFR-223ENST00000544268 ACEP12821 1306 aa19.42■□□□□ 0.7
CHFR-223ENST00000544268 BACH2Q9BYV9 841 aa19.42■□□□□ 0.7
CHFR-223ENST00000544268 RGPD8O14715 1765 aaPredicted RBP19.42■□□□□ 0.7
CHFR-223ENST00000544268 NALCNQ8IZF0 1738 aa19.42■□□□□ 0.7
CHFR-223ENST00000544268 TRMT2AQ8IZ69 625 aaKnown RBP19.41■□□□□ 0.7
CHFR-223ENST00000544268 ZNF692Q9BU19 519 aaPredicted RBP19.41■□□□□ 0.7
CHFR-223ENST00000544268 LAS1LQ9Y4W2 734 aaKnown RBP19.41■□□□□ 0.7
CHFR-223ENST00000544268 NME9Q86XW9 330 aa19.4■□□□□ 0.7
CHFR-223ENST00000544268 PMFBP1Q8TBY8 1022 aa19.39■□□□□ 0.69
CHFR-223ENST00000544268 BRPF3Q9ULD4 1205 aa19.39■□□□□ 0.69
CHFR-223ENST00000544268 LMTK3Q96Q04 1460 aa19.38■□□□□ 0.69
CHFR-223ENST00000544268 NWD1Q149M9 1564 aa19.38■□□□□ 0.69
CHFR-223ENST00000544268 KDM2BQ8NHM5 1336 aa19.38■□□□□ 0.69
CHFR-223ENST00000544268 FMN2Q9NZ56 1722 aa19.38■□□□□ 0.69
CHFR-223ENST00000544268 ZRANB1Q9UGI0 708 aa19.37■□□□□ 0.69
CHFR-223ENST00000544268 GSE1Q14687 1217 aa19.36■□□□□ 0.69
CHFR-223ENST00000544268 ANKARQ7Z5J8 1434 aa19.36■□□□□ 0.69
CHFR-223ENST00000544268 ADGRL3Q9HAR2 1447 aa19.36■□□□□ 0.69
CHFR-223ENST00000544268 WWC1Q8IX03 1113 aa19.36■□□□□ 0.69
CHFR-223ENST00000544268 SHPRHQ149N8 1683 aa19.35■□□□□ 0.69
CHFR-223ENST00000544268 USP6P35125 1406 aa19.35■□□□□ 0.69
CHFR-223ENST00000544268 NRKQ7Z2Y5 1582 aa19.35■□□□□ 0.69
CHFR-223ENST00000544268 FBLN1P23142 703 aa19.35■□□□□ 0.69
CHFR-223ENST00000544268 CFAP53Q96M91 514 aa19.34■□□□□ 0.69
CHFR-223ENST00000544268 TTC21BQ7Z4L5 1316 aa19.34■□□□□ 0.69
CHFR-223ENST00000544268 C14orf37Q86TY3 774 aa19.33■□□□□ 0.69
CHFR-223ENST00000544268 NGDNQ8NEJ9 315 aaKnown RBP19.33■□□□□ 0.69
CHFR-223ENST00000544268 PROSER2Q86WR7 435 aaPredicted RBP19.33■□□□□ 0.68
CHFR-223ENST00000544268 RSPH6AQ9H0K4 717 aa19.33■□□□□ 0.68
CHFR-223ENST00000544268 TNNQ9UQP3 1299 aa19.32■□□□□ 0.68
CHFR-223ENST00000544268 E9PSI1 815 aa19.32■□□□□ 0.68
CHFR-223ENST00000544268 RGS3P49796 1198 aa19.32■□□□□ 0.68
CHFR-223ENST00000544268 TCP11L2Q8N4U5 519 aa19.31■□□□□ 0.68
CHFR-223ENST00000544268 PANK1Q8TE04 598 aa19.31■□□□□ 0.68
CHFR-223ENST00000544268 COG3Q96JB2 828 aa19.31■□□□□ 0.68
CHFR-223ENST00000544268 BCL2L13Q9BXK5 485 aa19.31■□□□□ 0.68
CHFR-223ENST00000544268 SSH2Q76I76 1423 aa19.31■□□□□ 0.68
CHFR-223ENST00000544268 MS4A1P11836 297 aa19.31■□□□□ 0.68
CHFR-223ENST00000544268 STRCP1A6NGW2 1772 aa19.3■□□□□ 0.68
CHFR-223ENST00000544268 POLKQ9UBT6 870 aa19.3■□□□□ 0.68
CHFR-223ENST00000544268 STRCQ7RTU9 1775 aa19.29■□□□□ 0.68
CHFR-223ENST00000544268 COL3A1P02461 1466 aaPredicted RBP19.29■□□□□ 0.68
CHFR-223ENST00000544268 IGHDP01880 384 aa19.29■□□□□ 0.68
CHFR-223ENST00000544268 FRAT1Q92837 279 aaPredicted RBP19.29■□□□□ 0.68
CHFR-223ENST00000544268 MAP2P11137 1827 aaKnown RBP19.28■□□□□ 0.68
CHFR-223ENST00000544268 COG6Q9Y2V7 657 aa19.28■□□□□ 0.68
CHFR-223ENST00000544268 CENPQQ7L2Z9 268 aaPredicted RBP19.27■□□□□ 0.68
CHFR-223ENST00000544268 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.27■□□□□ 0.68
CHFR-223ENST00000544268 SLC4A3P48751 1232 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms