RNA–Protein interactions for RNA: ENST00000543998.1

TCTN2-204, Transcript of tectonic family member 2, humanhuman

TSL 5

Gene TCTN2, Length 2,918 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN2-204ENST00000543998 SLC34A2O95436 690 aa8.63□□□□□ -1.03
TCTN2-204ENST00000543998 COLQQ9Y215 455 aaPredicted RBP8.63□□□□□ -1.03
TCTN2-204ENST00000543998 NUDT18Q6ZVK8 323 aa8.62□□□□□ -1.03
TCTN2-204ENST00000543998 PCDHGA4Q9Y5G9 962 aa8.62□□□□□ -1.03
TCTN2-204ENST00000543998 PPM1GO15355 546 aaPredicted RBP8.62□□□□□ -1.03
TCTN2-204ENST00000543998 HELBQ8NG08 1087 aaPredicted RBP8.62□□□□□ -1.03
TCTN2-204ENST00000543998 B4GALNT3Q6L9W6 998 aa8.61□□□□□ -1.03
TCTN2-204ENST00000543998 ZDHHC16Q969W1 377 aa8.61□□□□□ -1.03
TCTN2-204ENST00000543998 ERICH3Q5RHP9 1530 aa8.61□□□□□ -1.03
TCTN2-204ENST00000543998 DHX57Q6P158 1386 aaKnown RBP8.61□□□□□ -1.03
TCTN2-204ENST00000543998 SMAPO00193 183 aa8.61□□□□□ -1.03
TCTN2-204ENST00000543998 CRTC2Q53ET0 693 aaPredicted RBP8.61□□□□□ -1.03
TCTN2-204ENST00000543998 TSKSQ9UJT2 592 aa8.61□□□□□ -1.03
TCTN2-204ENST00000543998 CCNB3Q8WWL7 1395 aa8.61□□□□□ -1.03
TCTN2-204ENST00000543998 CCDC125Q86Z20 511 aa8.6□□□□□ -1.03
TCTN2-204ENST00000543998 BIN2Q9UBW5 565 aaPredicted RBP8.6□□□□□ -1.03
TCTN2-204ENST00000543998 ATMINO43313 823 aaPredicted RBP8.6□□□□□ -1.03
TCTN2-204ENST00000543998 SSFA2P28290 1259 aa8.6□□□□□ -1.03
TCTN2-204ENST00000543998 MARSP56192 900 aaKnown RBP8.6□□□□□ -1.03
TCTN2-204ENST00000543998 PER1O15534 1290 aaPredicted RBP8.6□□□□□ -1.03
TCTN2-204ENST00000543998 SYMPKQ92797 1274 aaKnown RBP8.6□□□□□ -1.03
TCTN2-204ENST00000543998 KCNH8Q96L42 1107 aa8.6□□□□□ -1.03
TCTN2-204ENST00000543998 SOWAHDA6NJG2 315 aa8.59□□□□□ -1.03
TCTN2-204ENST00000543998 COL9A1P20849 921 aa8.59□□□□□ -1.03
TCTN2-204ENST00000543998 SIRT1Q96EB6 747 aa8.59□□□□□ -1.03
TCTN2-204ENST00000543998 CCDC136Q96JN2 1154 aa8.59□□□□□ -1.03
TCTN2-204ENST00000543998 TMEM134Q9H6X4 195 aa8.59□□□□□ -1.03
TCTN2-204ENST00000543998 ANKRD33BA6NCL7 494 aa8.59□□□□□ -1.03
TCTN2-204ENST00000543998 MTMR2Q13614 643 aa8.59□□□□□ -1.03
TCTN2-204ENST00000543998 KDM4FA0A1W2PPD8 638 aa8.58□□□□□ -1.04
TCTN2-204ENST00000543998 RAB3GAP2Q9H2M9 1393 aa8.58□□□□□ -1.04
TCTN2-204ENST00000543998 USP17L3A6NCW0 530 aa8.58□□□□□ -1.04
TCTN2-204ENST00000543998 USP17L4A6NCW7 530 aa8.58□□□□□ -1.04
TCTN2-204ENST00000543998 C19orf67A6NJJ6 358 aa8.58□□□□□ -1.04
TCTN2-204ENST00000543998 USP17L2Q6R6M4 530 aa8.58□□□□□ -1.04
TCTN2-204ENST00000543998 USP17L1Q7RTZ2 530 aa8.58□□□□□ -1.04
TCTN2-204ENST00000543998 PRDM2Q13029 1718 aa8.58□□□□□ -1.04
TCTN2-204ENST00000543998 DNAJB2P25686 324 aa8.57□□□□□ -1.04
TCTN2-204ENST00000543998 IER5LQ5T953 404 aa8.57□□□□□ -1.04
TCTN2-204ENST00000543998 RRP7BPQ9NSQ0 103 aa8.57□□□□□ -1.04
TCTN2-204ENST00000543998 SALL2Q9Y467 1007 aaPredicted RBP8.57□□□□□ -1.04
TCTN2-204ENST00000543998 ARID4AP29374 1257 aaPredicted RBP8.57□□□□□ -1.04
TCTN2-204ENST00000543998 NPAS4Q8IUM7 802 aa8.57□□□□□ -1.04
TCTN2-204ENST00000543998 CLSPNQ9HAW4 1339 aa8.57□□□□□ -1.04
TCTN2-204ENST00000543998 PDS5BQ9NTI5 1447 aa8.56□□□□□ -1.04
TCTN2-204ENST00000543998 C6orf229H3BNL8 230 aa8.56□□□□□ -1.04
TCTN2-204ENST00000543998 SOX11P35716 441 aa8.56□□□□□ -1.04
TCTN2-204ENST00000543998 KHSRPQ92945 711 aaKnown RBP eCLIP8.56□□□□□ -1.04
TCTN2-204ENST00000543998 ZNF608Q9ULD9 1512 aaPredicted RBP8.55□□□□□ -1.04
TCTN2-204ENST00000543998 FAM69CQ0P6D2 419 aa8.55□□□□□ -1.04
TCTN2-204ENST00000543998 PNMA3Q9UL41 463 aa8.55□□□□□ -1.04
TCTN2-204ENST00000543998 ELOAQ14241 798 aaKnown RBP8.55□□□□□ -1.04
TCTN2-204ENST00000543998 SEC24BO95487 1268 aa8.54□□□□□ -1.04
TCTN2-204ENST00000543998 DRC1Q96MC2 740 aa8.54□□□□□ -1.04
TCTN2-204ENST00000543998 GAPVD1Q14C86 1478 aa8.54□□□□□ -1.04
TCTN2-204ENST00000543998 DNMBPQ6XZF7 1577 aa8.54□□□□□ -1.04
TCTN2-204ENST00000543998 USP17L5A8MUK1 530 aa8.54□□□□□ -1.04
TCTN2-204ENST00000543998 FBXO45P0C2W1 286 aa8.54□□□□□ -1.04
TCTN2-204ENST00000543998 SKIP12755 728 aa8.54□□□□□ -1.04
TCTN2-204ENST00000543998 DEKP35659 375 aaKnown RBP8.54□□□□□ -1.04
TCTN2-204ENST00000543998 CNGB1Q14028 1251 aaPredicted RBP8.54□□□□□ -1.04
TCTN2-204ENST00000543998 ASTLQ6HA08 431 aaPredicted RBP8.54□□□□□ -1.04
TCTN2-204ENST00000543998 FAM174AQ8TBP5 190 aa8.54□□□□□ -1.04
TCTN2-204ENST00000543998 SREK1Q8WXA9 508 aaKnown RBP8.54□□□□□ -1.04
TCTN2-204ENST00000543998 ANO2Q9NQ90 1003 aa8.54□□□□□ -1.04
TCTN2-204ENST00000543998 KIF21AQ7Z4S6 1674 aa8.54□□□□□ -1.04
TCTN2-204ENST00000543998 NUDT7P0C024 238 aa8.53□□□□□ -1.04
TCTN2-204ENST00000543998 C3orf67Q6ZVT6 689 aa8.53□□□□□ -1.04
TCTN2-204ENST00000543998 PCF11O94913 1555 aaKnown RBP8.53□□□□□ -1.04
TCTN2-204ENST00000543998 USP17L15C9J2P7 530 aa8.53□□□□□ -1.04
TCTN2-204ENST00000543998 USP17L10C9JJH3 530 aa8.53□□□□□ -1.04
TCTN2-204ENST00000543998 USP17L13C9JLJ4 530 aa8.53□□□□□ -1.04
TCTN2-204ENST00000543998 USP17L12C9JPN9 530 aa8.53□□□□□ -1.04
TCTN2-204ENST00000543998 USP17L11C9JVI0 530 aa8.53□□□□□ -1.04
TCTN2-204ENST00000543998 USP17L21D6R901 530 aa8.53□□□□□ -1.04
TCTN2-204ENST00000543998 USP17L18D6R9N7 530 aa8.53□□□□□ -1.04
TCTN2-204ENST00000543998 USP17L22D6RA61 530 aa8.53□□□□□ -1.04
TCTN2-204ENST00000543998 USP17L17D6RBQ6 530 aa8.53□□□□□ -1.04
TCTN2-204ENST00000543998 USP17L19D6RCP7 530 aa8.53□□□□□ -1.04
TCTN2-204ENST00000543998 USP17L20D6RJB6 530 aa8.53□□□□□ -1.04
TCTN2-204ENST00000543998 GCGRP47871 477 aa8.53□□□□□ -1.04
TCTN2-204ENST00000543998 EIF4G2P78344 907 aaKnown RBP eCLIP8.53□□□□□ -1.04
TCTN2-204ENST00000543998 USP17L24Q0WX57 530 aa8.53□□□□□ -1.04
TCTN2-204ENST00000543998 LRRC9Q6ZRR7 1453 aa8.53□□□□□ -1.04
TCTN2-204ENST00000543998 ERCC3P19447 782 aa8.53□□□□□ -1.04
TCTN2-204ENST00000543998 ABCA10Q8WWZ4 1543 aa8.52□□□□□ -1.04
TCTN2-204ENST00000543998 SLF2Q8IX21 1173 aa8.52□□□□□ -1.05
TCTN2-204ENST00000543998 MKRN1Q9UHC7 482 aaKnown RBP8.52□□□□□ -1.05
TCTN2-204ENST00000543998 MTUS2Q5JR59 1369 aa8.52□□□□□ -1.05
TCTN2-204ENST00000543998 ZNF644Q9H582 1327 aaPredicted RBP8.52□□□□□ -1.05
TCTN2-204ENST00000543998 RECKO95980 971 aa8.52□□□□□ -1.05
TCTN2-204ENST00000543998 SLC10A3P09131 477 aa8.52□□□□□ -1.05
TCTN2-204ENST00000543998 ATP2B4P23634 1241 aa8.51□□□□□ -1.05
TCTN2-204ENST00000543998 TATDN2Q93075 761 aa8.51□□□□□ -1.05
TCTN2-204ENST00000543998 RRBP1Q9P2E9 1410 aaKnown RBP8.51□□□□□ -1.05
TCTN2-204ENST00000543998 RASA1P20936 1047 aa8.51□□□□□ -1.05
TCTN2-204ENST00000543998 ABL1P00519 1130 aa8.5□□□□□ -1.05
TCTN2-204ENST00000543998 KCNH2Q12809 1159 aa8.5□□□□□ -1.05
TCTN2-204ENST00000543998 DDX10Q13206 875 aaKnown RBP8.5□□□□□ -1.05
TCTN2-204ENST00000543998 ZNF211Q13398 564 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms