RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 MEX3CQ5U5Q3 659 aaKnown RBP25.06■■□□□ 1.6
TSFM-208ENST00000543727 NUTM2BA6NNL0 878 aaPredicted RBP25.04■■□□□ 1.6
TSFM-208ENST00000543727 NUTM2EB1AL46 878 aaPredicted RBP25.04■■□□□ 1.6
TSFM-208ENST00000543727 NUTM2AQ8IVF1 878 aaPredicted RBP25.04■■□□□ 1.6
TSFM-208ENST00000543727 PHRF1Q9P1Y6 1649 aaKnown RBP25.04■■□□□ 1.6
TSFM-208ENST00000543727 SSH2Q76I76 1423 aa25.02■■□□□ 1.6
TSFM-208ENST00000543727 PAK3O75914 559 aaPredicted RBP25.01■■□□□ 1.59
TSFM-208ENST00000543727 LMOD2Q6P5Q4 547 aa25.01■■□□□ 1.59
TSFM-208ENST00000543727 MYOM1P52179 1685 aa25.01■■□□□ 1.59
TSFM-208ENST00000543727 CD163L1Q9NR16 1453 aa25■■□□□ 1.59
TSFM-208ENST00000543727 PIK3C2AO00443 1686 aa25■■□□□ 1.59
TSFM-208ENST00000543727 USP54Q70EL1 1684 aa25■■□□□ 1.59
TSFM-208ENST00000543727 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.99■■□□□ 1.59
TSFM-208ENST00000543727 TERF2IPQ9NYB0 399 aa24.99■■□□□ 1.59
TSFM-208ENST00000543727 NWD2Q9ULI1 1742 aa24.99■■□□□ 1.59
TSFM-208ENST00000543727 KTN1Q86UP2 1357 aaKnown RBP24.98■■□□□ 1.59
TSFM-208ENST00000543727 TTC21AQ8NDW8 1320 aa24.97■■□□□ 1.59
TSFM-208ENST00000543727 HDGFL2Q7Z4V5 671 aaPredicted RBP24.97■■□□□ 1.59
TSFM-208ENST00000543727 HAP1P54257 671 aaPredicted RBP24.96■■□□□ 1.59
TSFM-208ENST00000543727 ZNF772Q68DY9 489 aaPredicted RBP24.96■■□□□ 1.59
TSFM-208ENST00000543727 TMC1Q8TDI8 760 aa24.96■■□□□ 1.59
TSFM-208ENST00000543727 EDC4Q6P2E9 1401 aaKnown RBP24.95■■□□□ 1.59
TSFM-208ENST00000543727 PLCH1Q4KWH8 1693 aa24.95■■□□□ 1.58
TSFM-208ENST00000543727 HSPA5P11021 654 aaKnown RBP24.95■■□□□ 1.58
TSFM-208ENST00000543727 COL14A1Q05707 1796 aaKnown RBP24.95■■□□□ 1.58
TSFM-208ENST00000543727 ANKRD36BQ8N2N9 1353 aa24.94■■□□□ 1.58
TSFM-208ENST00000543727 ADAMTS2O95450 1211 aa24.94■■□□□ 1.58
TSFM-208ENST00000543727 ABTB2Q8N961 1025 aa24.94■■□□□ 1.58
TSFM-208ENST00000543727 A0A1W2PP64 1363 aa24.93■■□□□ 1.58
TSFM-208ENST00000543727 C8orf37Q96NL8 207 aa24.93■■□□□ 1.58
TSFM-208ENST00000543727 USP19O94966 1318 aa24.92■■□□□ 1.58
TSFM-208ENST00000543727 NLRP13Q86W25 1043 aa24.92■■□□□ 1.58
TSFM-208ENST00000543727 SLC12A5Q9H2X9 1139 aa24.92■■□□□ 1.58
TSFM-208ENST00000543727 RGS17Q9UGC6 210 aaPredicted RBP24.92■■□□□ 1.58
TSFM-208ENST00000543727 SLIT3O75094 1523 aa24.91■■□□□ 1.58
TSFM-208ENST00000543727 AFF2P51816 1311 aa24.91■■□□□ 1.58
TSFM-208ENST00000543727 TTC21BQ7Z4L5 1316 aa24.91■■□□□ 1.58
TSFM-208ENST00000543727 NGLY1Q96IV0 654 aa24.91■■□□□ 1.58
TSFM-208ENST00000543727 FNBP4Q8N3X1 1017 aaPredicted RBP24.9■■□□□ 1.58
TSFM-208ENST00000543727 SLIT2O94813 1529 aa24.9■■□□□ 1.58
TSFM-208ENST00000543727 CABLES1Q8TDN4 633 aa24.89■■□□□ 1.58
TSFM-208ENST00000543727 KIF20BQ96Q89 1820 aa24.86■■□□□ 1.57
TSFM-208ENST00000543727 NRAPQ86VF7 1730 aa24.86■■□□□ 1.57
TSFM-208ENST00000543727 CPDO75976 1380 aa24.85■■□□□ 1.57
TSFM-208ENST00000543727 USP31Q70CQ4 1352 aa24.85■■□□□ 1.57
TSFM-208ENST00000543727 NLRP6P59044 892 aa24.84■■□□□ 1.57
TSFM-208ENST00000543727 BCL9LQ86UU0 1499 aa24.83■■□□□ 1.57
TSFM-208ENST00000543727 USP21Q9UK80 565 aa24.83■■□□□ 1.57
TSFM-208ENST00000543727 NUTM2GQ5VZR2 741 aa24.82■■□□□ 1.56
TSFM-208ENST00000543727 CDK12Q9NYV4 1490 aaPredicted RBP24.82■■□□□ 1.56
TSFM-208ENST00000543727 ABCC6O95255 1503 aa24.81■■□□□ 1.56
TSFM-208ENST00000543727 ATRNO75882 1429 aa24.81■■□□□ 1.56
TSFM-208ENST00000543727 KCNH5Q8NCM2 988 aa24.81■■□□□ 1.56
TSFM-208ENST00000543727 LMO7Q8WWI1 1683 aa24.81■■□□□ 1.56
TSFM-208ENST00000543727 GCP02774 474 aa24.8■■□□□ 1.56
TSFM-208ENST00000543727 POTEAQ6S8J7 498 aa24.8■■□□□ 1.56
TSFM-208ENST00000543727 TRPC5Q9UL62 973 aaPredicted RBP24.8■■□□□ 1.56
TSFM-208ENST00000543727 KIAA0232Q92628 1395 aa24.8■■□□□ 1.56
TSFM-208ENST00000543727 UNC5CLQ8IV45 518 aa24.79■■□□□ 1.56
TSFM-208ENST00000543727 PRDM11Q9NQV5 511 aa24.79■■□□□ 1.56
TSFM-208ENST00000543727 NFAT5O94916 1531 aa24.79■■□□□ 1.56
TSFM-208ENST00000543727 OVOS2A0A0J9YW53 1432 aa24.78■■□□□ 1.56
TSFM-208ENST00000543727 OVOS2Q6IE36 1432 aa24.78■■□□□ 1.56
TSFM-208ENST00000543727 PLEKHG5O94827 1062 aa24.78■■□□□ 1.56
TSFM-208ENST00000543727 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.78■■□□□ 1.56
TSFM-208ENST00000543727 FAM83GA6ND36 823 aa24.77■■□□□ 1.56
TSFM-208ENST00000543727 LTN1O94822 1766 aa24.77■■□□□ 1.56
TSFM-208ENST00000543727 QTRT2Q9H974 415 aaKnown RBP24.76■■□□□ 1.55
TSFM-208ENST00000543727 ANKRD26Q9UPS8 1709 aa24.75■■□□□ 1.55
TSFM-208ENST00000543727 COL18A1P39060 1754 aa24.75■■□□□ 1.55
TSFM-208ENST00000543727 RXRBP28702 533 aa24.74■■□□□ 1.55
TSFM-208ENST00000543727 ZEB1P37275 1124 aaPredicted RBP24.74■■□□□ 1.55
TSFM-208ENST00000543727 RBM6P78332 1123 aaKnown RBP24.74■■□□□ 1.55
TSFM-208ENST00000543727 ZC3H6P61129 1189 aaKnown RBP24.73■■□□□ 1.55
TSFM-208ENST00000543727 ILDR2Q71H61 639 aa24.73■■□□□ 1.55
TSFM-208ENST00000543727 NME9Q86XW9 330 aa24.73■■□□□ 1.55
TSFM-208ENST00000543727 NSD3Q9BZ95 1437 aa24.71■■□□□ 1.55
TSFM-208ENST00000543727 AATKQ6ZMQ8 1374 aa24.71■■□□□ 1.55
TSFM-208ENST00000543727 KIF7Q2M1P5 1343 aa24.71■■□□□ 1.55
TSFM-208ENST00000543727 POLR3GLQ9BT43 218 aa24.71■■□□□ 1.55
TSFM-208ENST00000543727 BTG4Q9NY30 223 aa24.71■■□□□ 1.55
TSFM-208ENST00000543727 VPS72Q15906 364 aa24.7■■□□□ 1.54
TSFM-208ENST00000543727 GLI3P10071 1580 aa24.7■■□□□ 1.54
TSFM-208ENST00000543727 CAMTA1Q9Y6Y1 1673 aa24.69■■□□□ 1.54
TSFM-208ENST00000543727 C11orf95C9JLR9 678 aaPredicted RBP24.69■■□□□ 1.54
TSFM-208ENST00000543727 COG3Q96JB2 828 aa24.69■■□□□ 1.54
TSFM-208ENST00000543727 RGPD5Q99666 1765 aa24.68■■□□□ 1.54
TSFM-208ENST00000543727 CGNL1Q0VF96 1302 aa24.67■■□□□ 1.54
TSFM-208ENST00000543727 ARHGEF25Q86VW2 580 aa24.67■■□□□ 1.54
TSFM-208ENST00000543727 GJD4Q96KN9 370 aaPredicted RBP24.67■■□□□ 1.54
TSFM-208ENST00000543727 CARD14Q9BXL6 1004 aa24.67■■□□□ 1.54
TSFM-208ENST00000543727 COL5A2P05997 1499 aaPredicted RBP24.66■■□□□ 1.54
TSFM-208ENST00000543727 FYB1O15117 783 aa24.66■■□□□ 1.54
TSFM-208ENST00000543727 CHRNA2Q15822 529 aa24.66■■□□□ 1.54
TSFM-208ENST00000543727 CCDC7Q96M83 1385 aa24.66■■□□□ 1.54
TSFM-208ENST00000543727 ZRANB1Q9UGI0 708 aa24.64■■□□□ 1.54
TSFM-208ENST00000543727 FAM208AQ9UK61 1670 aaKnown RBP24.64■■□□□ 1.53
TSFM-208ENST00000543727 NSD2O96028 1365 aa24.64■■□□□ 1.53
TSFM-208ENST00000543727 RGS12O14924 1447 aa24.62■■□□□ 1.53
TSFM-208ENST00000543727 PANK3Q9H999 370 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms