RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 PAK3O75914 559 aaPredicted RBP16.25■□□□□ 0.19
DDB1-223ENST00000543658 DIEXFQ68CQ4 756 aaKnown RBP16.25■□□□□ 0.19
DDB1-223ENST00000543658 AHDC1Q5TGY3 1603 aaPredicted RBP16.25■□□□□ 0.19
DDB1-223ENST00000543658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.24■□□□□ 0.19
DDB1-223ENST00000543658 TTC21AQ8NDW8 1320 aa16.23■□□□□ 0.19
DDB1-223ENST00000543658 KRT28Q7Z3Y7 464 aa16.23■□□□□ 0.19
DDB1-223ENST00000543658 PIK3C2AO00443 1686 aa16.23■□□□□ 0.19
DDB1-223ENST00000543658 ALS2Q96Q42 1657 aa16.23■□□□□ 0.19
DDB1-223ENST00000543658 NSD2O96028 1365 aa16.23■□□□□ 0.19
DDB1-223ENST00000543658 XPCQ01831 940 aaPredicted RBP16.22■□□□□ 0.19
DDB1-223ENST00000543658 CNGB1Q14028 1251 aaPredicted RBP16.22■□□□□ 0.19
DDB1-223ENST00000543658 CARD14Q9BXL6 1004 aa16.22■□□□□ 0.19
DDB1-223ENST00000543658 PXDNQ92626 1479 aa16.22■□□□□ 0.19
DDB1-223ENST00000543658 TTC21BQ7Z4L5 1316 aa16.21■□□□□ 0.19
DDB1-223ENST00000543658 USP54Q70EL1 1684 aa16.21■□□□□ 0.19
DDB1-223ENST00000543658 ANP32CO43423 234 aa16.21■□□□□ 0.19
DDB1-223ENST00000543658 LMOD2Q6P5Q4 547 aa16.2■□□□□ 0.18
DDB1-223ENST00000543658 TNS3Q68CZ2 1445 aa16.19■□□□□ 0.18
DDB1-223ENST00000543658 SBNO1A3KN83 1393 aa16.19■□□□□ 0.18
DDB1-223ENST00000543658 PER1O15534 1290 aaPredicted RBP16.19■□□□□ 0.18
DDB1-223ENST00000543658 CC2D1BQ5T0F9 858 aaKnown RBP16.19■□□□□ 0.18
DDB1-223ENST00000543658 DDX17Q92841 729 aaKnown RBP16.19■□□□□ 0.18
DDB1-223ENST00000543658 NPC1L1Q9UHC9 1359 aa16.18■□□□□ 0.18
DDB1-223ENST00000543658 ABTB2Q8N961 1025 aa16.18■□□□□ 0.18
DDB1-223ENST00000543658 COL16A1Q07092 1604 aaPredicted RBP16.18■□□□□ 0.18
DDB1-223ENST00000543658 SSH2Q76I76 1423 aa16.18■□□□□ 0.18
DDB1-223ENST00000543658 ARHGEF10O15013 1369 aa16.17■□□□□ 0.18
DDB1-223ENST00000543658 COG3Q96JB2 828 aa16.17■□□□□ 0.18
DDB1-223ENST00000543658 GGNBP2Q9H3C7 697 aa16.17■□□□□ 0.18
DDB1-223ENST00000543658 SOS2Q07890 1332 aaPredicted RBP16.17■□□□□ 0.18
DDB1-223ENST00000543658 MARF1Q9Y4F3 1742 aaKnown RBP16.16■□□□□ 0.18
DDB1-223ENST00000543658 AMER1Q5JTC6 1135 aaPredicted RBP16.16■□□□□ 0.18
DDB1-223ENST00000543658 NME9Q86XW9 330 aa16.16■□□□□ 0.18
DDB1-223ENST00000543658 MAP2P11137 1827 aaKnown RBP16.16■□□□□ 0.18
DDB1-223ENST00000543658 PHRF1Q9P1Y6 1649 aaKnown RBP16.16■□□□□ 0.18
DDB1-223ENST00000543658 NLRP6P59044 892 aa16.15■□□□□ 0.18
DDB1-223ENST00000543658 MORC1Q86VD1 984 aa16.15■□□□□ 0.18
DDB1-223ENST00000543658 FYB1O15117 783 aa16.14■□□□□ 0.17
DDB1-223ENST00000543658 NLRP13Q86W25 1043 aa16.14■□□□□ 0.17
DDB1-223ENST00000543658 SPATA31A3Q5VYP0 1347 aa16.14■□□□□ 0.17
DDB1-223ENST00000543658 ABCA3Q99758 1704 aa16.14■□□□□ 0.17
DDB1-223ENST00000543658 MED1Q15648 1581 aaPredicted RBP16.13■□□□□ 0.17
DDB1-223ENST00000543658 LTN1O94822 1766 aa16.13■□□□□ 0.17
DDB1-223ENST00000543658 OVOS2A0A0J9YW53 1432 aa16.13■□□□□ 0.17
DDB1-223ENST00000543658 OVOS2Q6IE36 1432 aa16.13■□□□□ 0.17
DDB1-223ENST00000543658 RALBP1Q15311 655 aa16.13■□□□□ 0.17
DDB1-223ENST00000543658 NUTM2GQ5VZR2 741 aa16.13■□□□□ 0.17
DDB1-223ENST00000543658 LRRC59Q96AG4 307 aaKnown RBP16.13■□□□□ 0.17
DDB1-223ENST00000543658 CRYBG1Q9Y4K1 1723 aa16.13■□□□□ 0.17
DDB1-223ENST00000543658 USP31Q70CQ4 1352 aa16.13■□□□□ 0.17
DDB1-223ENST00000543658 SHPRHQ149N8 1683 aa16.12■□□□□ 0.17
DDB1-223ENST00000543658 COL22A1Q8NFW1 1626 aaPredicted RBP16.12■□□□□ 0.17
DDB1-223ENST00000543658 HAP1P54257 671 aaPredicted RBP16.11■□□□□ 0.17
DDB1-223ENST00000543658 PARD3Q8TEW0 1356 aa16.11■□□□□ 0.17
DDB1-223ENST00000543658 PLEKHG5O94827 1062 aa16.1■□□□□ 0.17
DDB1-223ENST00000543658 PRKRIP1Q9H875 184 aaPredicted RBP16.1■□□□□ 0.17
DDB1-223ENST00000543658 SLIT3O75094 1523 aa16.09■□□□□ 0.17
DDB1-223ENST00000543658 TNNT2P45379 298 aaPredicted RBP16.09■□□□□ 0.17
DDB1-223ENST00000543658 ZRANB1Q9UGI0 708 aa16.09■□□□□ 0.17
DDB1-223ENST00000543658 SOX12O15370 315 aa16.08■□□□□ 0.16
DDB1-223ENST00000543658 KCNH5Q8NCM2 988 aa16.08■□□□□ 0.16
DDB1-223ENST00000543658 MYBBP1AQ9BQG0 1328 aaKnown RBP16.08■□□□□ 0.16
DDB1-223ENST00000543658 PNPLA6Q8IY17 1366 aa16.06■□□□□ 0.16
DDB1-223ENST00000543658 USP19O94966 1318 aa16.06■□□□□ 0.16
DDB1-223ENST00000543658 JCADQ9P266 1359 aa16.05■□□□□ 0.16
DDB1-223ENST00000543658 NFAT5O94916 1531 aa16.04■□□□□ 0.16
DDB1-223ENST00000543658 AATKQ6ZMQ8 1374 aa16.04■□□□□ 0.16
DDB1-223ENST00000543658 FBXO41Q8TF61 875 aa16.04■□□□□ 0.16
DDB1-223ENST00000543658 ZBTB7CA1YPR0 619 aa16.03■□□□□ 0.16
DDB1-223ENST00000543658 HSPA1LP34931 641 aa16.03■□□□□ 0.16
DDB1-223ENST00000543658 GCP02774 474 aa16.02■□□□□ 0.16
DDB1-223ENST00000543658 PPP2R1AP30153 589 aa16.02■□□□□ 0.16
DDB1-223ENST00000543658 CFAP53Q96M91 514 aa16.02■□□□□ 0.16
DDB1-223ENST00000543658 RGPD5Q99666 1765 aa16.02■□□□□ 0.15
DDB1-223ENST00000543658 PPM1GO15355 546 aaPredicted RBP16.01■□□□□ 0.15
DDB1-223ENST00000543658 AMPHP49418 695 aa16.01■□□□□ 0.15
DDB1-223ENST00000543658 MIER1Q8N108 512 aa16.01■□□□□ 0.15
DDB1-223ENST00000543658 CABLES1Q8TDN4 633 aa16.01■□□□□ 0.15
DDB1-223ENST00000543658 PEAK1Q9H792 1746 aa16■□□□□ 0.15
DDB1-223ENST00000543658 CDK12Q9NYV4 1490 aaPredicted RBP16■□□□□ 0.15
DDB1-223ENST00000543658 RRS1Q15050 365 aaKnown RBP16■□□□□ 0.15
DDB1-223ENST00000543658 SMG6Q86US8 1419 aaKnown RBP16■□□□□ 0.15
DDB1-223ENST00000543658 RTL1A6NKG5 1358 aa16■□□□□ 0.15
DDB1-223ENST00000543658 ABCC6O95255 1503 aa15.99■□□□□ 0.15
DDB1-223ENST00000543658 COL14A1Q05707 1796 aaKnown RBP15.99■□□□□ 0.15
DDB1-223ENST00000543658 FLT4P35916 1363 aa15.99■□□□□ 0.15
DDB1-223ENST00000543658 MAP3K19Q56UN5 1328 aa15.98■□□□□ 0.15
DDB1-223ENST00000543658 SPATA31A6Q5VVP1 1343 aa15.98■□□□□ 0.15
DDB1-223ENST00000543658 MTHFSP49914 203 aa15.98■□□□□ 0.15
DDB1-223ENST00000543658 ZC3H6P61129 1189 aaKnown RBP15.98■□□□□ 0.15
DDB1-223ENST00000543658 PLCH1Q4KWH8 1693 aa15.98■□□□□ 0.15
DDB1-223ENST00000543658 KIF24Q5T7B8 1368 aa15.98■□□□□ 0.15
DDB1-223ENST00000543658 NUTM2BA6NNL0 878 aaPredicted RBP15.97■□□□□ 0.15
DDB1-223ENST00000543658 NUTM2EB1AL46 878 aaPredicted RBP15.97■□□□□ 0.15
DDB1-223ENST00000543658 CCER2I3L3R5 266 aa15.97■□□□□ 0.15
DDB1-223ENST00000543658 FBLN1P23142 703 aa15.97■□□□□ 0.15
DDB1-223ENST00000543658 NUTM2AQ8IVF1 878 aaPredicted RBP15.97■□□□□ 0.15
DDB1-223ENST00000543658 MRS2Q9HD23 443 aa15.97■□□□□ 0.15
DDB1-223ENST00000543658 PRDM11Q9NQV5 511 aa15.97■□□□□ 0.15
DDB1-223ENST00000543658 POLKQ9UBT6 870 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms