RNA–Protein interactions for RNA: ENST00000543364.1

RAB35-205, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 3

Gene RAB35, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-205ENST00000543364 ALS2Q96Q42 1657 aa21.55■■□□□ 1.04
RAB35-205ENST00000543364 FNBP4Q8N3X1 1017 aaPredicted RBP21.52■■□□□ 1.04
RAB35-205ENST00000543364 QTRT2Q9H974 415 aaKnown RBP21.52■■□□□ 1.04
RAB35-205ENST00000543364 USP21Q9UK80 565 aa21.52■■□□□ 1.04
RAB35-205ENST00000543364 ATAD2Q6PL18 1390 aa21.51■■□□□ 1.03
RAB35-205ENST00000543364 TMC1Q8TDI8 760 aa21.51■■□□□ 1.03
RAB35-205ENST00000543364 ABTB2Q8N961 1025 aa21.5■■□□□ 1.03
RAB35-205ENST00000543364 SOCS7O14512 581 aa21.49■■□□□ 1.03
RAB35-205ENST00000543364 SLC12A5Q9H2X9 1139 aa21.49■■□□□ 1.03
RAB35-205ENST00000543364 MARF1Q9Y4F3 1742 aaKnown RBP21.49■■□□□ 1.03
RAB35-205ENST00000543364 USP6P35125 1406 aa21.48■■□□□ 1.03
RAB35-205ENST00000543364 FAM83GA6ND36 823 aa21.48■■□□□ 1.03
RAB35-205ENST00000543364 RXRBP28702 533 aa21.48■■□□□ 1.03
RAB35-205ENST00000543364 ABCA3Q99758 1704 aa21.48■■□□□ 1.03
RAB35-205ENST00000543364 ZNF692Q9BU19 519 aaPredicted RBP21.47■■□□□ 1.03
RAB35-205ENST00000543364 BCL9LQ86UU0 1499 aa21.45■■□□□ 1.03
RAB35-205ENST00000543364 PUS7Q96PZ0 661 aaKnown RBP21.45■■□□□ 1.02
RAB35-205ENST00000543364 CPSF1Q10570 1443 aaKnown RBP21.45■■□□□ 1.02
RAB35-205ENST00000543364 SSH2Q76I76 1423 aa21.45■■□□□ 1.02
RAB35-205ENST00000543364 TMF1P82094 1093 aa21.44■■□□□ 1.02
RAB35-205ENST00000543364 TTC21BQ7Z4L5 1316 aa21.44■■□□□ 1.02
RAB35-205ENST00000543364 KTN1Q86UP2 1357 aaKnown RBP21.44■■□□□ 1.02
RAB35-205ENST00000543364 SLC24A1O60721 1099 aa21.43■■□□□ 1.02
RAB35-205ENST00000543364 ZC3H6P61129 1189 aaKnown RBP21.43■■□□□ 1.02
RAB35-205ENST00000543364 TRPC5Q9UL62 973 aaPredicted RBP21.43■■□□□ 1.02
RAB35-205ENST00000543364 BRD4O60885 1362 aaPredicted RBP21.43■■□□□ 1.02
RAB35-205ENST00000543364 SLIT2O94813 1529 aa21.43■■□□□ 1.02
RAB35-205ENST00000543364 CRYBG1Q9Y4K1 1723 aa21.43■■□□□ 1.02
RAB35-205ENST00000543364 NLRP6P59044 892 aa21.42■■□□□ 1.02
RAB35-205ENST00000543364 RBM6P78332 1123 aaKnown RBP21.42■■□□□ 1.02
RAB35-205ENST00000543364 AKAP12Q02952 1782 aa21.42■■□□□ 1.02
RAB35-205ENST00000543364 NLRP13Q86W25 1043 aa21.42■■□□□ 1.02
RAB35-205ENST00000543364 UNC5CLQ8IV45 518 aa21.42■■□□□ 1.02
RAB35-205ENST00000543364 CD163L1Q9NR16 1453 aa21.42■■□□□ 1.02
RAB35-205ENST00000543364 ATRNO75882 1429 aa21.41■■□□□ 1.02
RAB35-205ENST00000543364 HSPA5P11021 654 aaKnown RBP21.41■■□□□ 1.02
RAB35-205ENST00000543364 CHRNA2Q15822 529 aa21.4■■□□□ 1.02
RAB35-205ENST00000543364 HDGFL2Q7Z4V5 671 aaPredicted RBP21.4■■□□□ 1.02
RAB35-205ENST00000543364 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.4■■□□□ 1.02
RAB35-205ENST00000543364 KIAA0232Q92628 1395 aa21.39■■□□□ 1.02
RAB35-205ENST00000543364 USP19O94966 1318 aa21.39■■□□□ 1.01
RAB35-205ENST00000543364 GCP02774 474 aa21.39■■□□□ 1.01
RAB35-205ENST00000543364 EIF4G2P78344 907 aaKnown RBP eCLIP21.39■■□□□ 1.01
RAB35-205ENST00000543364 PRDM11Q9NQV5 511 aa21.39■■□□□ 1.01
RAB35-205ENST00000543364 BTG4Q9NY30 223 aa21.39■■□□□ 1.01
RAB35-205ENST00000543364 ZRANB1Q9UGI0 708 aa21.39■■□□□ 1.01
RAB35-205ENST00000543364 PHRF1Q9P1Y6 1649 aaKnown RBP21.38■■□□□ 1.01
RAB35-205ENST00000543364 TERF2IPQ9NYB0 399 aa21.37■■□□□ 1.01
RAB35-205ENST00000543364 A0A1W2PP64 1363 aa21.36■■□□□ 1.01
RAB35-205ENST00000543364 TTC21AQ8NDW8 1320 aa21.36■■□□□ 1.01
RAB35-205ENST00000543364 GJD4Q96KN9 370 aaPredicted RBP21.36■■□□□ 1.01
RAB35-205ENST00000543364 PIK3C2AO00443 1686 aa21.36■■□□□ 1.01
RAB35-205ENST00000543364 PLCH1Q4KWH8 1693 aa21.36■■□□□ 1.01
RAB35-205ENST00000543364 NME9Q86XW9 330 aa21.35■■□□□ 1.01
RAB35-205ENST00000543364 MON2Q7Z3U7 1717 aa21.35■■□□□ 1.01
RAB35-205ENST00000543364 ZBTB7CA1YPR0 619 aa21.34■■□□□ 1.01
RAB35-205ENST00000543364 CCDC9Q9Y3X0 531 aaKnown RBP21.34■■□□□ 1.01
RAB35-205ENST00000543364 NRKQ7Z2Y5 1582 aa21.34■■□□□ 1.01
RAB35-205ENST00000543364 RGS12O14924 1447 aa21.33■■□□□ 1.01
RAB35-205ENST00000543364 SOX12O15370 315 aa21.33■■□□□ 1.01
RAB35-205ENST00000543364 VPS72Q15906 364 aa21.33■■□□□ 1.01
RAB35-205ENST00000543364 CDCA8Q53HL2 280 aa21.33■■□□□ 1.01
RAB35-205ENST00000543364 COL14A1Q05707 1796 aaKnown RBP21.33■■□□□ 1
RAB35-205ENST00000543364 POLR3GLQ9BT43 218 aa21.32■■□□□ 1
RAB35-205ENST00000543364 NINLQ9Y2I6 1382 aa21.32■■□□□ 1
RAB35-205ENST00000543364 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.32■■□□□ 1
RAB35-205ENST00000543364 NWD2Q9ULI1 1742 aa21.31■■□□□ 1
RAB35-205ENST00000543364 CDK12Q9NYV4 1490 aaPredicted RBP21.31■■□□□ 1
RAB35-205ENST00000543364 EDC4Q6P2E9 1401 aaKnown RBP21.3■■□□□ 1
RAB35-205ENST00000543364 CPDO75976 1380 aa21.3■■□□□ 1
RAB35-205ENST00000543364 SLIT3O75094 1523 aa21.29■■□□□ 1
RAB35-205ENST00000543364 GLI3P10071 1580 aa21.29■■□□□ 1
RAB35-205ENST00000543364 STRN4Q9NRL3 753 aa21.29■■□□□ 1
RAB35-205ENST00000543364 ANKRD36BQ8N2N9 1353 aa21.28■■□□□ 1
RAB35-205ENST00000543364 NRAPQ86VF7 1730 aa21.28■■□□□ 1
RAB35-205ENST00000543364 USP31Q70CQ4 1352 aa21.27■■□□□ 1
RAB35-205ENST00000543364 C11orf95C9JLR9 678 aaPredicted RBP21.27■■□□□ 1
RAB35-205ENST00000543364 CAMTA1Q9Y6Y1 1673 aa21.26■□□□□ 0.99
RAB35-205ENST00000543364 EVA1CP58658 441 aa21.26■□□□□ 0.99
RAB35-205ENST00000543364 KCNH5Q8NCM2 988 aa21.26■□□□□ 0.99
RAB35-205ENST00000543364 ARHGEF25Q86VW2 580 aa21.24■□□□□ 0.99
RAB35-205ENST00000543364 CARD14Q9BXL6 1004 aa21.24■□□□□ 0.99
RAB35-205ENST00000543364 AXIN2Q9Y2T1 843 aa21.24■□□□□ 0.99
RAB35-205ENST00000543364 SPATA31A5Q5VU36 1347 aa21.24■□□□□ 0.99
RAB35-205ENST00000543364 SPATA31A7Q8IWB4 1347 aa21.24■□□□□ 0.99
RAB35-205ENST00000543364 FAM98CQ17RN3 349 aaKnown RBP21.23■□□□□ 0.99
RAB35-205ENST00000543364 SEPT12Q8IYM1 358 aa21.23■□□□□ 0.99
RAB35-205ENST00000543364 LARP1Q6PKG0 1096 aaKnown RBP21.22■□□□□ 0.99
RAB35-205ENST00000543364 AATKQ6ZMQ8 1374 aa21.22■□□□□ 0.99
RAB35-205ENST00000543364 MYOM1P52179 1685 aa21.21■□□□□ 0.99
RAB35-205ENST00000543364 LMO7Q8WWI1 1683 aa21.21■□□□□ 0.99
RAB35-205ENST00000543364 NFAT5O94916 1531 aa21.21■□□□□ 0.99
RAB35-205ENST00000543364 FYB1O15117 783 aa21.21■□□□□ 0.99
RAB35-205ENST00000543364 ONECUT3O60422 494 aaPredicted RBP21.21■□□□□ 0.99
RAB35-205ENST00000543364 FBLN1P23142 703 aa21.2■□□□□ 0.98
RAB35-205ENST00000543364 GGNBP2Q9H3C7 697 aa21.2■□□□□ 0.98
RAB35-205ENST00000543364 USP35Q9P2H5 1018 aa21.2■□□□□ 0.98
RAB35-205ENST00000543364 SPATA31A1Q5TZJ5 1347 aa21.2■□□□□ 0.98
RAB35-205ENST00000543364 OVOS2A0A0J9YW53 1432 aa21.2■□□□□ 0.98
RAB35-205ENST00000543364 OVOS2Q6IE36 1432 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms