RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF2H3-212	ENST00000543341	TMF1	P82094	1093 aa		10.13	□□□□□ -0.79
GTF2H3-212	ENST00000543341	WAPL	Q7Z5K2	1190 aa		10.13	□□□□□ -0.79
GTF2H3-212	ENST00000543341		A0A1W2PP64	1363 aa		10.13	□□□□□ -0.79
GTF2H3-212	ENST00000543341	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.12	□□□□□ -0.79
GTF2H3-212	ENST00000543341	PHLPP1	O60346	1717 aa		10.12	□□□□□ -0.79
GTF2H3-212	ENST00000543341	NRAP	Q86VF7	1730 aa		10.12	□□□□□ -0.79
GTF2H3-212	ENST00000543341	PLCH1	Q4KWH8	1693 aa		10.12	□□□□□ -0.79
GTF2H3-212	ENST00000543341	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	10.11	□□□□□ -0.79
GTF2H3-212	ENST00000543341	CDCA8	Q53HL2	280 aa		10.11	□□□□□ -0.79
GTF2H3-212	ENST00000543341	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.11	□□□□□ -0.79
GTF2H3-212	ENST00000543341	MAP2	P11137	1827 aa	Known RBP	10.11	□□□□□ -0.79
GTF2H3-212	ENST00000543341	INSR	P06213	1382 aa		10.09	□□□□□ -0.79
GTF2H3-212	ENST00000543341	CDK19	Q9BWU1	502 aa		10.09	□□□□□ -0.79
GTF2H3-212	ENST00000543341	SBNO1	A3KN83	1393 aa		10.09	□□□□□ -0.79
GTF2H3-212	ENST00000543341	CARD14	Q9BXL6	1004 aa		10.09	□□□□□ -0.79
GTF2H3-212	ENST00000543341	NCAPD2	Q15021	1401 aa		10.08	□□□□□ -0.8
GTF2H3-212	ENST00000543341	NWD2	Q9ULI1	1742 aa		10.08	□□□□□ -0.8
GTF2H3-212	ENST00000543341	PRKCSH	P14314	528 aa	Predicted RBP	10.08	□□□□□ -0.8
GTF2H3-212	ENST00000543341	C19orf44	Q9H6X5	657 aa		10.08	□□□□□ -0.8
GTF2H3-212	ENST00000543341	ADAMTS7	Q9UKP4	1686 aa		10.06	□□□□□ -0.8
GTF2H3-212	ENST00000543341	AATK	Q6ZMQ8	1374 aa		10.06	□□□□□ -0.8
GTF2H3-212	ENST00000543341	MSH6	P52701	1360 aa		10.05	□□□□□ -0.8
GTF2H3-212	ENST00000543341	PNPLA6	Q8IY17	1366 aa		10.05	□□□□□ -0.8
GTF2H3-212	ENST00000543341	RGPD5	Q99666	1765 aa		10.05	□□□□□ -0.8
GTF2H3-212	ENST00000543341	ANP32C	O43423	234 aa		10.05	□□□□□ -0.8
GTF2H3-212	ENST00000543341	NSD3	Q9BZ95	1437 aa		10.05	□□□□□ -0.8
GTF2H3-212	ENST00000543341	USP19	O94966	1318 aa		10.05	□□□□□ -0.8
GTF2H3-212	ENST00000543341	SHANK3	Q9BYB0	1731 aa		10.05	□□□□□ -0.8
GTF2H3-212	ENST00000543341	NUDT16	Q96DE0	195 aa	Known RBP	10.05	□□□□□ -0.8
GTF2H3-212	ENST00000543341	STK26	Q9P289	416 aa		10.05	□□□□□ -0.8
GTF2H3-212	ENST00000543341	CCDC61	Q9Y6R9	512 aa		10.05	□□□□□ -0.8
GTF2H3-212	ENST00000543341	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.04	□□□□□ -0.8
GTF2H3-212	ENST00000543341	COL14A1	Q05707	1796 aa	Known RBP	10.04	□□□□□ -0.8
GTF2H3-212	ENST00000543341	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.04	□□□□□ -0.8
GTF2H3-212	ENST00000543341	SOS2	Q07890	1332 aa	Predicted RBP	10.04	□□□□□ -0.8
GTF2H3-212	ENST00000543341	TTC21A	Q8NDW8	1320 aa		10.03	□□□□□ -0.8
GTF2H3-212	ENST00000543341	TNS3	Q68CZ2	1445 aa		10.03	□□□□□ -0.8
GTF2H3-212	ENST00000543341	PKD1L3	Q7Z443	1732 aa		10.03	□□□□□ -0.8
GTF2H3-212	ENST00000543341	CABP2	Q9NPB3	220 aa		10.02	□□□□□ -0.8
GTF2H3-212	ENST00000543341	KIF24	Q5T7B8	1368 aa		10.02	□□□□□ -0.8
GTF2H3-212	ENST00000543341	VIRMA	Q69YN4	1812 aa	Known RBP	10.02	□□□□□ -0.81
GTF2H3-212	ENST00000543341	POGK	Q9P215	609 aa		10.02	□□□□□ -0.81
GTF2H3-212	ENST00000543341	PLEKHG2	Q9H7P9	1386 aa		10.01	□□□□□ -0.81
GTF2H3-212	ENST00000543341	RGPD2	P0DJD1	1756 aa		10.01	□□□□□ -0.81
GTF2H3-212	ENST00000543341	ZNF692	Q9BU19	519 aa	Predicted RBP	10.01	□□□□□ -0.81
GTF2H3-212	ENST00000543341	PARP4	Q9UKK3	1724 aa	Known RBP	10.01	□□□□□ -0.81
GTF2H3-212	ENST00000543341	CADPS2	Q86UW7	1296 aa		10.01	□□□□□ -0.81
GTF2H3-212	ENST00000543341	LRRC37A3	O60309	1634 aa		10.01	□□□□□ -0.81
GTF2H3-212	ENST00000543341	PROSER2	Q86WR7	435 aa	Predicted RBP	10	□□□□□ -0.81
GTF2H3-212	ENST00000543341	SLC12A5	Q9H2X9	1139 aa		10	□□□□□ -0.81
GTF2H3-212	ENST00000543341	RBM19	Q9Y4C8	960 aa	Known RBP	10	□□□□□ -0.81
GTF2H3-212	ENST00000543341	ACE	P12821	1306 aa		10	□□□□□ -0.81
GTF2H3-212	ENST00000543341	PANK3	Q9H999	370 aa		9.99	□□□□□ -0.81
GTF2H3-212	ENST00000543341	BRINP3	Q76B58	766 aa		9.99	□□□□□ -0.81
GTF2H3-212	ENST00000543341	CPD	O75976	1380 aa		9.98	□□□□□ -0.81
GTF2H3-212	ENST00000543341	SIPA1L3	O60292	1781 aa	Predicted RBP	9.98	□□□□□ -0.81
GTF2H3-212	ENST00000543341	CABP1	Q9NZU7	370 aa		9.98	□□□□□ -0.81
GTF2H3-212	ENST00000543341	RTL1	A6NKG5	1358 aa		9.98	□□□□□ -0.81
GTF2H3-212	ENST00000543341	CGNL1	Q0VF96	1302 aa		9.97	□□□□□ -0.81
GTF2H3-212	ENST00000543341	TTC21B	Q7Z4L5	1316 aa		9.97	□□□□□ -0.81
GTF2H3-212	ENST00000543341	BLM	P54132	1417 aa	Predicted RBP	9.97	□□□□□ -0.81
GTF2H3-212	ENST00000543341	PRKRIP1	Q9H875	184 aa	Predicted RBP	9.97	□□□□□ -0.81
GTF2H3-212	ENST00000543341	FYB1	O15117	783 aa		9.97	□□□□□ -0.81
GTF2H3-212	ENST00000543341	CNGB1	Q14028	1251 aa	Predicted RBP	9.96	□□□□□ -0.82
GTF2H3-212	ENST00000543341	TERF2IP	Q9NYB0	399 aa		9.96	□□□□□ -0.82
GTF2H3-212	ENST00000543341	PHF8	Q9UPP1	1060 aa		9.95	□□□□□ -0.82
GTF2H3-212	ENST00000543341	DLG5	Q8TDM6	1919 aa		9.95	□□□□□ -0.82
GTF2H3-212	ENST00000543341	SPATA31A3	Q5VYP0	1347 aa		9.95	□□□□□ -0.82
GTF2H3-212	ENST00000543341	CCER2	I3L3R5	266 aa		9.95	□□□□□ -0.82
GTF2H3-212	ENST00000543341	RALBP1	Q15311	655 aa		9.95	□□□□□ -0.82
GTF2H3-212	ENST00000543341	SLAIN2	Q9P270	581 aa		9.95	□□□□□ -0.82
GTF2H3-212	ENST00000543341	CIC	Q96RK0	1608 aa	Predicted RBP	9.95	□□□□□ -0.82
GTF2H3-212	ENST00000543341	THSD7A	Q9UPZ6	1657 aa		9.94	□□□□□ -0.82
GTF2H3-212	ENST00000543341	ARHGEF10	O15013	1369 aa		9.94	□□□□□ -0.82
GTF2H3-212	ENST00000543341	SRPK2	P78362	688 aa	Known RBP	9.94	□□□□□ -0.82
GTF2H3-212	ENST00000543341	NCBP3	Q53F19	620 aa	Known RBP	9.94	□□□□□ -0.82
GTF2H3-212	ENST00000543341	HNRNPU	Q00839	825 aa	Known RBP eCLIP	9.94	□□□□□ -0.82
GTF2H3-212	ENST00000543341	ORAI2	Q96SN7	254 aa		9.94	□□□□□ -0.82
GTF2H3-212	ENST00000543341	PAPPA	Q13219	1627 aa		9.93	□□□□□ -0.82
GTF2H3-212	ENST00000543341	IRX6	P78412	446 aa	Predicted RBP	9.93	□□□□□ -0.82
GTF2H3-212	ENST00000543341	SAFB2	Q14151	953 aa	Known RBP eCLIP	9.93	□□□□□ -0.82
GTF2H3-212	ENST00000543341	CERK	Q8TCT0	537 aa		9.93	□□□□□ -0.82
GTF2H3-212	ENST00000543341	MYBBP1A	Q9BQG0	1328 aa	Known RBP	9.93	□□□□□ -0.82
GTF2H3-212	ENST00000543341	NPHP3	Q7Z494	1330 aa		9.92	□□□□□ -0.82
GTF2H3-212	ENST00000543341	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	9.91	□□□□□ -0.82
GTF2H3-212	ENST00000543341	LRP6	O75581	1613 aa		9.91	□□□□□ -0.82
GTF2H3-212	ENST00000543341	SLIT2	O94813	1529 aa		9.91	□□□□□ -0.82
GTF2H3-212	ENST00000543341	ATF3	P18847	181 aa		9.9	□□□□□ -0.82
GTF2H3-212	ENST00000543341	POLR3GL	Q9BT43	218 aa		9.9	□□□□□ -0.82
GTF2H3-212	ENST00000543341	RBM33	Q96EV2	1170 aa	Known RBP	9.9	□□□□□ -0.82
GTF2H3-212	ENST00000543341	KDR	P35968	1356 aa		9.9	□□□□□ -0.82
GTF2H3-212	ENST00000543341	ZNF831	Q5JPB2	1677 aa		9.89	□□□□□ -0.83
GTF2H3-212	ENST00000543341	SCN11A	Q9UI33	1791 aa		9.89	□□□□□ -0.83
GTF2H3-212	ENST00000543341	PPP2R1A	P30153	589 aa		9.89	□□□□□ -0.83
GTF2H3-212	ENST00000543341	SENP3	Q9H4L4	574 aa	Predicted RBP	9.89	□□□□□ -0.83
GTF2H3-212	ENST00000543341	GLI3	P10071	1580 aa		9.88	□□□□□ -0.83
GTF2H3-212	ENST00000543341	UBR2	Q8IWV8	1755 aa		9.87	□□□□□ -0.83
GTF2H3-212	ENST00000543341	COL5A2	P05997	1499 aa	Predicted RBP	9.87	□□□□□ -0.83
GTF2H3-212	ENST00000543341	KDM3B	Q7LBC6	1761 aa		9.87	□□□□□ -0.83
GTF2H3-212	ENST00000543341	TOGARAM1	Q9Y4F4	1720 aa		9.87	□□□□□ -0.83

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms