RNA–Protein interactions for RNA: ENST00000543120.5

PTPN6-221, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-221ENST00000543120 CABP1Q9NZU7 370 aa23.71■■□□□ 1.39
PTPN6-221ENST00000543120 CARD11Q9BXL7 1154 aa23.69■■□□□ 1.38
PTPN6-221ENST00000543120 PPIP5K1Q6PFW1 1433 aa23.68■■□□□ 1.38
PTPN6-221ENST00000543120 EVC2Q86UK5 1308 aa23.67■■□□□ 1.38
PTPN6-221ENST00000543120 ALS2Q96Q42 1657 aa23.67■■□□□ 1.38
PTPN6-221ENST00000543120 MARF1Q9Y4F3 1742 aaKnown RBP23.65■■□□□ 1.38
PTPN6-221ENST00000543120 QRICH2Q9H0J4 1663 aa23.64■■□□□ 1.38
PTPN6-221ENST00000543120 VPS72Q15906 364 aa23.64■■□□□ 1.37
PTPN6-221ENST00000543120 PCGF6Q9BYE7 350 aa23.64■■□□□ 1.37
PTPN6-221ENST00000543120 TOPAZ1Q8N9V7 1692 aa23.64■■□□□ 1.37
PTPN6-221ENST00000543120 ABTB2Q8N961 1025 aa23.63■■□□□ 1.37
PTPN6-221ENST00000543120 BTG4Q9NY30 223 aa23.62■■□□□ 1.37
PTPN6-221ENST00000543120 RALGAPBQ86X10 1494 aa23.62■■□□□ 1.37
PTPN6-221ENST00000543120 ITSN1Q15811 1721 aa23.62■■□□□ 1.37
PTPN6-221ENST00000543120 ABCA3Q99758 1704 aa23.6■■□□□ 1.37
PTPN6-221ENST00000543120 ZC3H6P61129 1189 aaKnown RBP23.59■■□□□ 1.37
PTPN6-221ENST00000543120 CHRNA2Q15822 529 aa23.58■■□□□ 1.37
PTPN6-221ENST00000543120 PRDM11Q9NQV5 511 aa23.58■■□□□ 1.37
PTPN6-221ENST00000543120 CCDC9Q9Y3X0 531 aaKnown RBP23.58■■□□□ 1.37
PTPN6-221ENST00000543120 KIAA0232Q92628 1395 aa23.57■■□□□ 1.36
PTPN6-221ENST00000543120 ONECUT3O60422 494 aaPredicted RBP23.56■■□□□ 1.36
PTPN6-221ENST00000543120 GLI3P10071 1580 aa23.56■■□□□ 1.36
PTPN6-221ENST00000543120 SEPT12Q8IYM1 358 aa23.55■■□□□ 1.36
PTPN6-221ENST00000543120 USP6P35125 1406 aa23.55■■□□□ 1.36
PTPN6-221ENST00000543120 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.54■■□□□ 1.36
PTPN6-221ENST00000543120 SSH2Q76I76 1423 aa23.54■■□□□ 1.36
PTPN6-221ENST00000543120 NLRP13Q86W25 1043 aa23.54■■□□□ 1.36
PTPN6-221ENST00000543120 USP19O94966 1318 aa23.54■■□□□ 1.36
PTPN6-221ENST00000543120 SBNO2Q9Y2G9 1366 aa23.53■■□□□ 1.36
PTPN6-221ENST00000543120 GCP02774 474 aa23.53■■□□□ 1.36
PTPN6-221ENST00000543120 CRYBG1Q9Y4K1 1723 aa23.53■■□□□ 1.36
PTPN6-221ENST00000543120 ST20-MTHFSA0A0A6YYL1 179 aa23.52■■□□□ 1.36
PTPN6-221ENST00000543120 NLRP6P59044 892 aa23.52■■□□□ 1.36
PTPN6-221ENST00000543120 ZNF692Q9BU19 519 aaPredicted RBP23.52■■□□□ 1.36
PTPN6-221ENST00000543120 BRD4O60885 1362 aaPredicted RBP23.52■■□□□ 1.36
PTPN6-221ENST00000543120 ATAD2Q6PL18 1390 aa23.52■■□□□ 1.36
PTPN6-221ENST00000543120 PLCH1Q4KWH8 1693 aa23.51■■□□□ 1.35
PTPN6-221ENST00000543120 TESK2Q96S53 571 aa23.51■■□□□ 1.35
PTPN6-221ENST00000543120 TTC21BQ7Z4L5 1316 aa23.5■■□□□ 1.35
PTPN6-221ENST00000543120 FAM98CQ17RN3 349 aaKnown RBP23.49■■□□□ 1.35
PTPN6-221ENST00000543120 SLC12A5Q9H2X9 1139 aa23.49■■□□□ 1.35
PTPN6-221ENST00000543120 NWD2Q9ULI1 1742 aa23.49■■□□□ 1.35
PTPN6-221ENST00000543120 SPATA31A5Q5VU36 1347 aa23.49■■□□□ 1.35
PTPN6-221ENST00000543120 SPATA31A7Q8IWB4 1347 aa23.49■■□□□ 1.35
PTPN6-221ENST00000543120 CPSF1Q10570 1443 aaKnown RBP23.49■■□□□ 1.35
PTPN6-221ENST00000543120 COL14A1Q05707 1796 aaKnown RBP23.48■■□□□ 1.35
PTPN6-221ENST00000543120 STRN4Q9NRL3 753 aa23.48■■□□□ 1.35
PTPN6-221ENST00000543120 CPDO75976 1380 aa23.46■■□□□ 1.35
PTPN6-221ENST00000543120 TMC1Q8TDI8 760 aa23.46■■□□□ 1.35
PTPN6-221ENST00000543120 NRAPQ86VF7 1730 aa23.45■■□□□ 1.34
PTPN6-221ENST00000543120 PHRF1Q9P1Y6 1649 aaKnown RBP23.44■■□□□ 1.34
PTPN6-221ENST00000543120 KTN1Q86UP2 1357 aaKnown RBP23.44■■□□□ 1.34
PTPN6-221ENST00000543120 EVA1CP58658 441 aa23.44■■□□□ 1.34
PTPN6-221ENST00000543120 ZRANB1Q9UGI0 708 aa23.44■■□□□ 1.34
PTPN6-221ENST00000543120 SPATA31A1Q5TZJ5 1347 aa23.43■■□□□ 1.34
PTPN6-221ENST00000543120 CLSPNQ9HAW4 1339 aa23.43■■□□□ 1.34
PTPN6-221ENST00000543120 KRT27Q7Z3Y8 459 aa23.43■■□□□ 1.34
PTPN6-221ENST00000543120 PUS7Q96PZ0 661 aaKnown RBP23.43■■□□□ 1.34
PTPN6-221ENST00000543120 TIMELESSQ9UNS1 1208 aa23.43■■□□□ 1.34
PTPN6-221ENST00000543120 NRKQ7Z2Y5 1582 aa23.43■■□□□ 1.34
PTPN6-221ENST00000543120 LARP1Q6PKG0 1096 aaKnown RBP23.42■■□□□ 1.34
PTPN6-221ENST00000543120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.42■■□□□ 1.34
PTPN6-221ENST00000543120 CD163L1Q9NR16 1453 aa23.42■■□□□ 1.34
PTPN6-221ENST00000543120 CAMTA1Q9Y6Y1 1673 aa23.41■■□□□ 1.34
PTPN6-221ENST00000543120 A0A0G2JS52 829 aa23.41■■□□□ 1.34
PTPN6-221ENST00000543120 ZBTB7CA1YPR0 619 aa23.41■■□□□ 1.34
PTPN6-221ENST00000543120 MYT1Q01538 1121 aa23.41■■□□□ 1.34
PTPN6-221ENST00000543120 TTC21AQ8NDW8 1320 aa23.4■■□□□ 1.34
PTPN6-221ENST00000543120 USP35Q9P2H5 1018 aa23.4■■□□□ 1.34
PTPN6-221ENST00000543120 EP400Q96L91 3159 aa23.39■■□□□ 1.33
PTPN6-221ENST00000543120 SOX12O15370 315 aa23.38■■□□□ 1.33
PTPN6-221ENST00000543120 NME9Q86XW9 330 aa23.38■■□□□ 1.33
PTPN6-221ENST00000543120 AXIN2Q9Y2T1 843 aa23.38■■□□□ 1.33
PTPN6-221ENST00000543120 USP47Q96K76 1375 aa23.38■■□□□ 1.33
PTPN6-221ENST00000543120 FAM182BQ5T319 152 aa23.37■■□□□ 1.33
PTPN6-221ENST00000543120 HDGFL2Q7Z4V5 671 aaPredicted RBP23.37■■□□□ 1.33
PTPN6-221ENST00000543120 CCDC125Q86Z20 511 aa23.37■■□□□ 1.33
PTPN6-221ENST00000543120 CCER1Q8TC90 406 aaPredicted RBP23.37■■□□□ 1.33
PTPN6-221ENST00000543120 PIK3C2AO00443 1686 aa23.37■■□□□ 1.33
PTPN6-221ENST00000543120 SLIT3O75094 1523 aa23.37■■□□□ 1.33
PTPN6-221ENST00000543120 ARHGEF25Q86VW2 580 aa23.36■■□□□ 1.33
PTPN6-221ENST00000543120 AATKQ6ZMQ8 1374 aa23.36■■□□□ 1.33
PTPN6-221ENST00000543120 BRWD3Q6RI45 1802 aa23.34■■□□□ 1.33
PTPN6-221ENST00000543120 KCNH5Q8NCM2 988 aa23.34■■□□□ 1.33
PTPN6-221ENST00000543120 TERF2IPQ9NYB0 399 aa23.34■■□□□ 1.33
PTPN6-221ENST00000543120 A0A1W2PP64 1363 aa23.34■■□□□ 1.33
PTPN6-221ENST00000543120 AKAP12Q02952 1782 aa23.34■■□□□ 1.33
PTPN6-221ENST00000543120 LMO7Q8WWI1 1683 aa23.33■■□□□ 1.33
PTPN6-221ENST00000543120 BARGINQ6ZT62 677 aa23.33■■□□□ 1.33
PTPN6-221ENST00000543120 USP31Q70CQ4 1352 aa23.32■■□□□ 1.32
PTPN6-221ENST00000543120 SLC24A1O60721 1099 aa23.32■■□□□ 1.32
PTPN6-221ENST00000543120 TCP11L2Q8N4U5 519 aa23.32■■□□□ 1.32
PTPN6-221ENST00000543120 COL5A2P05997 1499 aaPredicted RBP23.31■■□□□ 1.32
PTPN6-221ENST00000543120 TMF1P82094 1093 aa23.31■■□□□ 1.32
PTPN6-221ENST00000543120 DEFB132Q7Z7B7 95 aa23.31■■□□□ 1.32
PTPN6-221ENST00000543120 BLMP54132 1417 aaPredicted RBP23.3■■□□□ 1.32
PTPN6-221ENST00000543120 EDC4Q6P2E9 1401 aaKnown RBP23.28■■□□□ 1.32
PTPN6-221ENST00000543120 THRAP3Q9Y2W1 955 aaKnown RBP23.27■■□□□ 1.32
PTPN6-221ENST00000543120 THSD7AQ9UPZ6 1657 aa23.27■■□□□ 1.32
PTPN6-221ENST00000543120 MON2Q7Z3U7 1717 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms