RNA–Protein interactions for RNA: ENST00000543005.5

GTF2H3-210, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 3

Gene GTF2H3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-210ENST00000543005 C6orf229H3BNL8 230 aa8.84□□□□□ -0.99
GTF2H3-210ENST00000543005 PPFIA3O75145 1194 aa8.84□□□□□ -0.99
GTF2H3-210ENST00000543005 LINC01559Q495D7 138 aa8.84□□□□□ -0.99
GTF2H3-210ENST00000543005 DESI1Q6ICB0 168 aa8.84□□□□□ -0.99
GTF2H3-210ENST00000543005 CDK15Q96Q40 435 aa8.84□□□□□ -0.99
GTF2H3-210ENST00000543005 TMEM151AQ8N4L1 468 aa8.83□□□□□ -1
GTF2H3-210ENST00000543005 RASSF7Q02833 373 aa8.82□□□□□ -1
GTF2H3-210ENST00000543005 MAN1A2O60476 641 aa8.81□□□□□ -1
GTF2H3-210ENST00000543005 FAM174AQ8TBP5 190 aa8.81□□□□□ -1
GTF2H3-210ENST00000543005 GDF11O95390 407 aa8.8□□□□□ -1
GTF2H3-210ENST00000543005 CCDC102AQ96A19 550 aa8.8□□□□□ -1
GTF2H3-210ENST00000543005 RNF225M0QZC1 329 aaPredicted RBP8.79□□□□□ -1
GTF2H3-210ENST00000543005 SPDYE5A6NIY4 337 aa8.78□□□□□ -1
GTF2H3-210ENST00000543005 ZIC2O95409 532 aaPredicted RBP8.78□□□□□ -1
GTF2H3-210ENST00000543005 KRT76Q01546 638 aa8.78□□□□□ -1
GTF2H3-210ENST00000543005 NR5A1Q13285 461 aa8.78□□□□□ -1
GTF2H3-210ENST00000543005 PRR7Q8TB68 274 aa8.78□□□□□ -1
GTF2H3-210ENST00000543005 SPIRE2Q8WWL2 714 aa8.77□□□□□ -1.01
GTF2H3-210ENST00000543005 ITPKCQ96DU7 683 aa8.77□□□□□ -1.01
GTF2H3-210ENST00000543005 ZFAND3Q9H8U3 227 aa8.77□□□□□ -1.01
GTF2H3-210ENST00000543005 ADAMTS8Q9UP79 889 aa8.77□□□□□ -1.01
GTF2H3-210ENST00000543005 SOS2Q07890 1332 aaPredicted RBP8.76□□□□□ -1.01
GTF2H3-210ENST00000543005 NR3C2P08235 984 aa8.75□□□□□ -1.01
GTF2H3-210ENST00000543005 MTMR2Q13614 643 aa8.75□□□□□ -1.01
GTF2H3-210ENST00000543005 C6orf118Q5T5N4 469 aa8.75□□□□□ -1.01
GTF2H3-210ENST00000543005 LYPD8Q6UX82 237 aa8.75□□□□□ -1.01
GTF2H3-210ENST00000543005 MEIOBQ8N635 442 aa8.75□□□□□ -1.01
GTF2H3-210ENST00000543005 GRM5P41594 1212 aa8.74□□□□□ -1.01
GTF2H3-210ENST00000543005 LINC00528Q8N1L1 170 aa8.74□□□□□ -1.01
GTF2H3-210ENST00000543005 GPR161Q8N6U8 529 aaKnown RBP8.74□□□□□ -1.01
GTF2H3-210ENST00000543005 DNMT3LQ9UJW3 386 aa8.74□□□□□ -1.01
GTF2H3-210ENST00000543005 MOXD2PA6NHM9 499 aa8.73□□□□□ -1.01
GTF2H3-210ENST00000543005 SPTLC1O15269 473 aa8.73□□□□□ -1.01
GTF2H3-210ENST00000543005 UPP2O95045 317 aa8.73□□□□□ -1.01
GTF2H3-210ENST00000543005 NDUFV2P19404 249 aa8.73□□□□□ -1.01
GTF2H3-210ENST00000543005 GJA5P36382 358 aa8.73□□□□□ -1.01
GTF2H3-210ENST00000543005 BMP2P12643 396 aa8.72□□□□□ -1.01
GTF2H3-210ENST00000543005 NANOS1Q8WY41 292 aaKnown RBP8.72□□□□□ -1.01
GTF2H3-210ENST00000543005 FOXJ1Q92949 421 aa8.72□□□□□ -1.01
GTF2H3-210ENST00000543005 F12P00748 615 aaPredicted RBP8.71□□□□□ -1.02
GTF2H3-210ENST00000543005 IGHA1P01876 353 aa8.71□□□□□ -1.02
GTF2H3-210ENST00000543005 SSTR3P32745 418 aaPredicted RBP8.71□□□□□ -1.02
GTF2H3-210ENST00000543005 CNTNAP3BQ96NU0 1288 aa8.71□□□□□ -1.02
GTF2H3-210ENST00000543005 CNTNAP3Q9BZ76 1288 aa8.71□□□□□ -1.02
GTF2H3-210ENST00000543005 DNMT3AQ9Y6K1 912 aaPredicted RBP8.71□□□□□ -1.02
GTF2H3-210ENST00000543005 ARID5BQ14865 1188 aa8.7□□□□□ -1.02
GTF2H3-210ENST00000543005 C4orf48Q5BLP8 95 aa8.7□□□□□ -1.02
GTF2H3-210ENST00000543005 ZNF385CQ66K41 422 aaPredicted RBP8.7□□□□□ -1.02
GTF2H3-210ENST00000543005 KRI1Q8N9T8 703 aaKnown RBP8.7□□□□□ -1.02
GTF2H3-210ENST00000543005 CTHP32929 405 aa8.69□□□□□ -1.02
GTF2H3-210ENST00000543005 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.69□□□□□ -1.02
GTF2H3-210ENST00000543005 TSEN34Q9BSV6 310 aaKnown RBP8.68□□□□□ -1.02
GTF2H3-210ENST00000543005 TULP1O00294 542 aaPredicted RBP8.67□□□□□ -1.02
GTF2H3-210ENST00000543005 ARHGEF15O94989 841 aa8.67□□□□□ -1.02
GTF2H3-210ENST00000543005 SLURP2P0DP57 97 aa8.67□□□□□ -1.02
GTF2H3-210ENST00000543005 BPHLQ86WA6 291 aaPredicted RBP8.67□□□□□ -1.02
GTF2H3-210ENST00000543005 C1QTNF2Q9BXJ5 285 aa8.67□□□□□ -1.02
GTF2H3-210ENST00000543005 COL25A1Q9BXS0 654 aaPredicted RBP8.67□□□□□ -1.02
GTF2H3-210ENST00000543005 FOXK2Q01167 660 aa8.66□□□□□ -1.02
GTF2H3-210ENST00000543005 PTSQ03393 145 aa8.66□□□□□ -1.02
GTF2H3-210ENST00000543005 MAP4K5Q9Y4K4 846 aa8.66□□□□□ -1.02
GTF2H3-210ENST00000543005 KANK3Q6NY19 840 aa8.65□□□□□ -1.02
GTF2H3-210ENST00000543005 MAP10Q9P2G4 905 aa8.65□□□□□ -1.02
GTF2H3-210ENST00000543005 TTLL8A6PVC2 850 aa8.64□□□□□ -1.03
GTF2H3-210ENST00000543005 CFAP99D6REC4 459 aa8.64□□□□□ -1.03
GTF2H3-210ENST00000543005 RNFT1Q5M7Z0 435 aa8.64□□□□□ -1.03
GTF2H3-210ENST00000543005 SVOPQ8N4V2 548 aa8.64□□□□□ -1.03
GTF2H3-210ENST00000543005 SLC24A1O60721 1099 aa8.63□□□□□ -1.03
GTF2H3-210ENST00000543005 GPAT2Q6NUI2 795 aa8.63□□□□□ -1.03
GTF2H3-210ENST00000543005 RSBN1LQ6PCB5 846 aaPredicted RBP8.63□□□□□ -1.03
GTF2H3-210ENST00000543005 SH3RF1Q7Z6J0 888 aa8.63□□□□□ -1.03
GTF2H3-210ENST00000543005 TRMT44Q8IYL2 757 aaKnown RBP8.63□□□□□ -1.03
GTF2H3-210ENST00000543005 EMILIN1Q9Y6C2 1016 aa8.63□□□□□ -1.03
GTF2H3-210ENST00000543005 PLCB2Q00722 1185 aa8.62□□□□□ -1.03
GTF2H3-210ENST00000543005 AGERQ15109 404 aa8.62□□□□□ -1.03
GTF2H3-210ENST00000543005 CCDC155Q8N6L0 562 aa8.62□□□□□ -1.03
GTF2H3-210ENST00000543005 SLC35F4A4IF30 521 aa8.61□□□□□ -1.03
GTF2H3-210ENST00000543005 IRS1P35568 1242 aa8.61□□□□□ -1.03
GTF2H3-210ENST00000543005 DIXDC1Q155Q3 683 aa8.61□□□□□ -1.03
GTF2H3-210ENST00000543005 AMHR2Q16671 573 aa8.61□□□□□ -1.03
GTF2H3-210ENST00000543005 WHAMMQ8TF30 809 aa8.61□□□□□ -1.03
GTF2H3-210ENST00000543005 FSHRP23945 695 aa8.6□□□□□ -1.03
GTF2H3-210ENST00000543005 PRPF38BQ5VTL8 546 aaKnown RBP8.6□□□□□ -1.03
GTF2H3-210ENST00000543005 PCDHB15Q9Y5E8 787 aa8.6□□□□□ -1.03
GTF2H3-210ENST00000543005 SPINT1O43278 529 aa8.59□□□□□ -1.03
GTF2H3-210ENST00000543005 HRCP23327 699 aa8.59□□□□□ -1.03
GTF2H3-210ENST00000543005 Q6ZVU0 165 aa8.59□□□□□ -1.03
GTF2H3-210ENST00000543005 CCDC116Q8IYX3 515 aa8.59□□□□□ -1.03
GTF2H3-210ENST00000543005 ARMC2Q8NEN0 867 aa8.59□□□□□ -1.03
GTF2H3-210ENST00000543005 SCARF2Q96GP6 870 aaPredicted RBP8.59□□□□□ -1.03
GTF2H3-210ENST00000543005 TBC1D2Q9BYX2 928 aa8.59□□□□□ -1.03
GTF2H3-210ENST00000543005 ZBTB3Q9H5J0 574 aa8.59□□□□□ -1.03
GTF2H3-210ENST00000543005 BEGAINQ9BUH8 593 aa8.58□□□□□ -1.04
GTF2H3-210ENST00000543005 ITGA6P23229 1130 aa8.57□□□□□ -1.04
GTF2H3-210ENST00000543005 VASH1Q7L8A9 365 aaPredicted RBP8.57□□□□□ -1.04
GTF2H3-210ENST00000543005 SH3BP5LQ7L8J4 393 aa8.57□□□□□ -1.04
GTF2H3-210ENST00000543005 PER1O15534 1290 aaPredicted RBP8.56□□□□□ -1.04
GTF2H3-210ENST00000543005 MARSP56192 900 aaKnown RBP8.56□□□□□ -1.04
GTF2H3-210ENST00000543005 TTLL12Q14166 644 aaPredicted RBP8.56□□□□□ -1.04
GTF2H3-210ENST00000543005 XP32Q5T750 250 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms