RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 HSPA2P54652 639 aa6.67□□□□□ -1.34
KDM3B-209ENST00000542866 ABCC3O15438 1527 aa6.67□□□□□ -1.34
KDM3B-209ENST00000542866 AGLP35573 1532 aa6.67□□□□□ -1.34
KDM3B-209ENST00000542866 HSP90AB1P08238 724 aaKnown RBP6.67□□□□□ -1.34
KDM3B-209ENST00000542866 NGEFQ8N5V2 710 aa6.67□□□□□ -1.34
KDM3B-209ENST00000542866 ILDR1Q86SU0 546 aaPredicted RBP6.66□□□□□ -1.34
KDM3B-209ENST00000542866 CARD14Q9BXL6 1004 aa6.66□□□□□ -1.34
KDM3B-209ENST00000542866 ADGRF5Q8IZF2 1346 aa6.66□□□□□ -1.34
KDM3B-209ENST00000542866 NOS1P29475 1434 aa6.66□□□□□ -1.34
KDM3B-209ENST00000542866 ITPRIPQ8IWB1 547 aa6.66□□□□□ -1.34
KDM3B-209ENST00000542866 RUNDC1Q96C34 613 aa6.66□□□□□ -1.34
KDM3B-209ENST00000542866 ERBB4Q15303 1308 aa6.66□□□□□ -1.34
KDM3B-209ENST00000542866 DZIP1LQ8IYY4 767 aaKnown RBP6.65□□□□□ -1.34
KDM3B-209ENST00000542866 MVPQ14764 893 aaKnown RBP6.65□□□□□ -1.34
KDM3B-209ENST00000542866 ZKSCAN2Q63HK3 967 aa6.65□□□□□ -1.34
KDM3B-209ENST00000542866 DHX37Q8IY37 1157 aaKnown RBP6.65□□□□□ -1.34
KDM3B-209ENST00000542866 PHF23Q9BUL5 403 aaPredicted RBP6.65□□□□□ -1.34
KDM3B-209ENST00000542866 ARHGAP31Q2M1Z3 1444 aa6.65□□□□□ -1.34
KDM3B-209ENST00000542866 GAS2L3Q86XJ1 694 aa6.65□□□□□ -1.35
KDM3B-209ENST00000542866 TNPO1Q92973 898 aaKnown RBP6.65□□□□□ -1.35
KDM3B-209ENST00000542866 MINK1Q8N4C8 1332 aaPredicted RBP6.65□□□□□ -1.35
KDM3B-209ENST00000542866 GBP4Q96PP9 640 aa6.64□□□□□ -1.35
KDM3B-209ENST00000542866 SMC4Q9NTJ3 1288 aa6.64□□□□□ -1.35
KDM3B-209ENST00000542866 RIMS2Q9UQ26 1411 aa6.64□□□□□ -1.35
KDM3B-209ENST00000542866 EIF2AK4Q9P2K8 1649 aaKnown RBP6.64□□□□□ -1.35
KDM3B-209ENST00000542866 NUTM2FA1L443 756 aa6.64□□□□□ -1.35
KDM3B-209ENST00000542866 ANP32BQ92688 251 aaKnown RBP6.64□□□□□ -1.35
KDM3B-209ENST00000542866 ERVK-7P63135 1459 aa6.64□□□□□ -1.35
KDM3B-209ENST00000542866 RICTORQ6R327 1708 aa6.64□□□□□ -1.35
KDM3B-209ENST00000542866 U2AF1L5P0DN76 240 aaPredicted RBP6.64□□□□□ -1.35
KDM3B-209ENST00000542866 U2AF1Q01081 240 aaKnown RBP eCLIP6.64□□□□□ -1.351e-7■■■□□ 14.6
KDM3B-209ENST00000542866 PROSER2Q86WR7 435 aaPredicted RBP6.64□□□□□ -1.35
KDM3B-209ENST00000542866 TSR2Q969E8 191 aaKnown RBP6.64□□□□□ -1.35
KDM3B-209ENST00000542866 EFCAB6Q5THR3 1501 aa6.63□□□□□ -1.35
KDM3B-209ENST00000542866 SCAF11Q99590 1463 aaKnown RBP6.63□□□□□ -1.35
KDM3B-209ENST00000542866 NCLP19338 710 aaKnown RBP6.63□□□□□ -1.35
KDM3B-209ENST00000542866 MTHFSP49914 203 aa6.63□□□□□ -1.35
KDM3B-209ENST00000542866 WDR63Q8IWG1 891 aa6.63□□□□□ -1.35
KDM3B-209ENST00000542866 PRAM1Q96QH2 718 aa6.63□□□□□ -1.35
KDM3B-209ENST00000542866 LNPKQ9C0E8 428 aa6.63□□□□□ -1.35
KDM3B-209ENST00000542866 NPC1L1Q9UHC9 1359 aa6.63□□□□□ -1.35
KDM3B-209ENST00000542866 EVC2Q86UK5 1308 aa6.63□□□□□ -1.35
KDM3B-209ENST00000542866 LMOD2Q6P5Q4 547 aa6.63□□□□□ -1.35
KDM3B-209ENST00000542866 KIAA1211Q6ZU35 1233 aa6.63□□□□□ -1.35
KDM3B-209ENST00000542866 CFAP53Q96M91 514 aa6.63□□□□□ -1.35
KDM3B-209ENST00000542866 TMEM2Q9UHN6 1383 aa6.62□□□□□ -1.35
KDM3B-209ENST00000542866 C14orf93Q9H972 538 aaKnown RBP6.62□□□□□ -1.35
KDM3B-209ENST00000542866 UNC13BO14795 1591 aa6.62□□□□□ -1.35
KDM3B-209ENST00000542866 FRMPD1Q5SYB0 1578 aa6.62□□□□□ -1.35
KDM3B-209ENST00000542866 PTPRTO14522 1441 aa6.62□□□□□ -1.35
KDM3B-209ENST00000542866 LAMC1P11047 1609 aa6.62□□□□□ -1.35
KDM3B-209ENST00000542866 MSNP26038 577 aaKnown RBP6.62□□□□□ -1.35
KDM3B-209ENST00000542866 EXOSC9Q06265 439 aaKnown RBP6.62□□□□□ -1.35
KDM3B-209ENST00000542866 ZNF692Q9BU19 519 aaPredicted RBP6.62□□□□□ -1.35
KDM3B-209ENST00000542866 SLC12A5Q9H2X9 1139 aa6.62□□□□□ -1.35
KDM3B-209ENST00000542866 ISY1Q9ULR0 285 aaKnown RBP6.62□□□□□ -1.35
KDM3B-209ENST00000542866 IQGAP3Q86VI3 1631 aa6.62□□□□□ -1.35
KDM3B-209ENST00000542866 NCKAP5LQ9HCH0 1330 aa6.62□□□□□ -1.35
KDM3B-209ENST00000542866 TPM2P07951 284 aa6.62□□□□□ -1.35
KDM3B-209ENST00000542866 SKOR2Q2VWA4 1001 aaPredicted RBP6.62□□□□□ -1.35
KDM3B-209ENST00000542866 PAXIP1Q6ZW49 1069 aaPredicted RBP6.62□□□□□ -1.35
KDM3B-209ENST00000542866 CNKSR2Q8WXI2 1034 aa6.62□□□□□ -1.35
KDM3B-209ENST00000542866 VIRMAQ69YN4 1812 aaKnown RBP6.61□□□□□ -1.35
KDM3B-209ENST00000542866 CFAP65Q6ZU64 1925 aaKnown RBP6.61□□□□□ -1.35
KDM3B-209ENST00000542866 TET3O43151 1660 aa6.61□□□□□ -1.35
KDM3B-209ENST00000542866 GOLGA6L22H0YM25 854 aa6.61□□□□□ -1.35
KDM3B-209ENST00000542866 U2SURPO15042 1029 aaKnown RBP6.61□□□□□ -1.35
KDM3B-209ENST00000542866 TRIM27P14373 513 aa6.61□□□□□ -1.35
KDM3B-209ENST00000542866 ATF3P18847 181 aa6.61□□□□□ -1.35
KDM3B-209ENST00000542866 NASPP49321 788 aaPredicted RBP6.61□□□□□ -1.35
KDM3B-209ENST00000542866 HDGFL2Q7Z4V5 671 aaPredicted RBP6.61□□□□□ -1.35
KDM3B-209ENST00000542866 DDX19BQ9UMR2 479 aa6.61□□□□□ -1.35
KDM3B-209ENST00000542866 AMOTL2Q9Y2J4 779 aa6.61□□□□□ -1.35
KDM3B-209ENST00000542866 DDX49Q9Y6V7 483 aaKnown RBP6.61□□□□□ -1.35
KDM3B-209ENST00000542866 POLR3AO14802 1390 aaPredicted RBP6.61□□□□□ -1.35
KDM3B-209ENST00000542866 LMTK2Q8IWU2 1503 aa6.61□□□□□ -1.35
KDM3B-209ENST00000542866 NGDNQ8NEJ9 315 aaKnown RBP6.61□□□□□ -1.35
KDM3B-209ENST00000542866 ARID3AQ99856 593 aa6.61□□□□□ -1.35
KDM3B-209ENST00000542866 NOB1Q9ULX3 412 aaKnown RBP6.61□□□□□ -1.35
KDM3B-209ENST00000542866 SYNMO15061 1565 aa6.61□□□□□ -1.35
KDM3B-209ENST00000542866 HAP1P54257 671 aaPredicted RBP6.61□□□□□ -1.35
KDM3B-209ENST00000542866 TRPM2O94759 1503 aa6.6□□□□□ -1.35
KDM3B-209ENST00000542866 UGGT1Q9NYU2 1555 aa6.6□□□□□ -1.35
KDM3B-209ENST00000542866 SSFA2P28290 1259 aa6.6□□□□□ -1.35
KDM3B-209ENST00000542866 LTKP29376 864 aa6.6□□□□□ -1.35
KDM3B-209ENST00000542866 TMEM57Q8N5G2 664 aa6.6□□□□□ -1.35
KDM3B-209ENST00000542866 SSH1Q8WYL5 1049 aa6.6□□□□□ -1.35
KDM3B-209ENST00000542866 RBM42Q9BTD8 480 aaKnown RBP6.6□□□□□ -1.35
KDM3B-209ENST00000542866 TERF2IPQ9NYB0 399 aa6.6□□□□□ -1.35
KDM3B-209ENST00000542866 CCDC173Q0VFZ6 552 aa6.6□□□□□ -1.35
KDM3B-209ENST00000542866 RAB3GAP1Q15042 981 aa6.6□□□□□ -1.35
KDM3B-209ENST00000542866 ANKRD45Q5TZF3 282 aa6.6□□□□□ -1.35
KDM3B-209ENST00000542866 NSD3Q9BZ95 1437 aa6.6□□□□□ -1.35
KDM3B-209ENST00000542866 HDAC1Q13547 482 aaPredicted RBP6.59□□□□□ -1.35
KDM3B-209ENST00000542866 ATF7IPQ6VMQ6 1270 aa6.59□□□□□ -1.35
KDM3B-209ENST00000542866 SMC5Q8IY18 1101 aa6.59□□□□□ -1.35
KDM3B-209ENST00000542866 PDCL3Q9H2J4 239 aa6.59□□□□□ -1.35
KDM3B-209ENST00000542866 FAM13BQ9NYF5 915 aa6.59□□□□□ -1.35
KDM3B-209ENST00000542866 CIZ1Q9ULV3 898 aaPredicted RBP6.59□□□□□ -1.35
KDM3B-209ENST00000542866 TBX22Q9Y458 520 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms