RNA–Protein interactions for RNA: ENST00000542791.1

MRPS35-205, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-205ENST00000542791 ATP7BP35670 1465 aa11.33□□□□□ -0.6
MRPS35-205ENST00000542791 GPRASP1Q5JY77 1395 aa11.33□□□□□ -0.6
MRPS35-205ENST00000542791 ATAD2Q6PL18 1390 aa11.33□□□□□ -0.6
MRPS35-205ENST00000542791 NBPF1Q3BBV0 1214 aa11.33□□□□□ -0.6
MRPS35-205ENST00000542791 RALGAPBQ86X10 1494 aa11.32□□□□□ -0.6
MRPS35-205ENST00000542791 ARHGEF28Q8N1W1 1705 aaKnown RBP11.32□□□□□ -0.6
MRPS35-205ENST00000542791 MARF1Q9Y4F3 1742 aaKnown RBP11.32□□□□□ -0.6
MRPS35-205ENST00000542791 ZBTB22O15209 634 aa11.32□□□□□ -0.6
MRPS35-205ENST00000542791 LMOD2Q6P5Q4 547 aa11.32□□□□□ -0.6
MRPS35-205ENST00000542791 NUDT16Q96DE0 195 aaKnown RBP11.32□□□□□ -0.6
MRPS35-205ENST00000542791 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.32□□□□□ -0.6
MRPS35-205ENST00000542791 KIAA1210Q9ULL0 1709 aa11.32□□□□□ -0.6
MRPS35-205ENST00000542791 FAM83GA6ND36 823 aa11.31□□□□□ -0.6
MRPS35-205ENST00000542791 HAP1P54257 671 aaPredicted RBP11.31□□□□□ -0.6
MRPS35-205ENST00000542791 VPS72Q15906 364 aa11.31□□□□□ -0.6
MRPS35-205ENST00000542791 NGDNQ8NEJ9 315 aaKnown RBP11.31□□□□□ -0.6
MRPS35-205ENST00000542791 CDK19Q9BWU1 502 aa11.31□□□□□ -0.6
MRPS35-205ENST00000542791 TRPM3Q9HCF6 1732 aaPredicted RBP11.31□□□□□ -0.6
MRPS35-205ENST00000542791 POLR3AO14802 1390 aaPredicted RBP11.29□□□□□ -0.6
MRPS35-205ENST00000542791 GLI3P10071 1580 aa11.29□□□□□ -0.6
MRPS35-205ENST00000542791 PLEKHG5O94827 1062 aa11.29□□□□□ -0.6
MRPS35-205ENST00000542791 L3MBTL2Q969R5 705 aa11.29□□□□□ -0.6
MRPS35-205ENST00000542791 CCDC61Q9Y6R9 512 aa11.29□□□□□ -0.6
MRPS35-205ENST00000542791 ALS2Q96Q42 1657 aa11.29□□□□□ -0.6
MRPS35-205ENST00000542791 ABCA3Q99758 1704 aa11.29□□□□□ -0.6
MRPS35-205ENST00000542791 PLEKHG3A1L390 1219 aa11.28□□□□□ -0.6
MRPS35-205ENST00000542791 ONECUT3O60422 494 aaPredicted RBP11.28□□□□□ -0.6
MRPS35-205ENST00000542791 ATXN8OSP0DMR3 200 aa11.28□□□□□ -0.6
MRPS35-205ENST00000542791 CENPJQ9HC77 1338 aaPredicted RBP11.28□□□□□ -0.6
MRPS35-205ENST00000542791 SIN3AQ96ST3 1273 aa11.27□□□□□ -0.61
MRPS35-205ENST00000542791 NWD2Q9ULI1 1742 aa11.26□□□□□ -0.61
MRPS35-205ENST00000542791 PAK3O75914 559 aaPredicted RBP11.26□□□□□ -0.61
MRPS35-205ENST00000542791 NBPF8Q3BBV2 869 aa11.26□□□□□ -0.61
MRPS35-205ENST00000542791 SEPT12Q8IYM1 358 aa11.26□□□□□ -0.61
MRPS35-205ENST00000542791 ACEP12821 1306 aa11.26□□□□□ -0.61
MRPS35-205ENST00000542791 PLCH1Q4KWH8 1693 aa11.25□□□□□ -0.61
MRPS35-205ENST00000542791 TOPAZ1Q8N9V7 1692 aa11.25□□□□□ -0.61
MRPS35-205ENST00000542791 CCDC125Q86Z20 511 aa11.25□□□□□ -0.61
MRPS35-205ENST00000542791 RBM42Q9BTD8 480 aaKnown RBP11.25□□□□□ -0.61
MRPS35-205ENST00000542791 BTG4Q9NY30 223 aa11.25□□□□□ -0.61
MRPS35-205ENST00000542791 ITSN1Q15811 1721 aa11.24□□□□□ -0.61
MRPS35-205ENST00000542791 ATF5Q9Y2D1 282 aaPredicted RBP11.24□□□□□ -0.61
MRPS35-205ENST00000542791 CRYBG1Q9Y4K1 1723 aa11.23□□□□□ -0.61
MRPS35-205ENST00000542791 SRPK2P78362 688 aaKnown RBP11.23□□□□□ -0.61
MRPS35-205ENST00000542791 CABP2Q9NPB3 220 aa11.23□□□□□ -0.61
MRPS35-205ENST00000542791 PRDM11Q9NQV5 511 aa11.23□□□□□ -0.61
MRPS35-205ENST00000542791 ZBTB12Q9Y330 459 aaPredicted RBP11.23□□□□□ -0.61
MRPS35-205ENST00000542791 KIAA0232Q92628 1395 aa11.23□□□□□ -0.61
MRPS35-205ENST00000542791 PPIP5K1Q6PFW1 1433 aa11.23□□□□□ -0.61
MRPS35-205ENST00000542791 COL14A1Q05707 1796 aaKnown RBP11.23□□□□□ -0.61
MRPS35-205ENST00000542791 USP19O94966 1318 aa11.22□□□□□ -0.61
MRPS35-205ENST00000542791 BLMP54132 1417 aaPredicted RBP11.22□□□□□ -0.61
MRPS35-205ENST00000542791 NEUROD1Q13562 356 aa11.22□□□□□ -0.61
MRPS35-205ENST00000542791 SPATA31A5Q5VU36 1347 aa11.22□□□□□ -0.61
MRPS35-205ENST00000542791 NRAPQ86VF7 1730 aa11.22□□□□□ -0.61
MRPS35-205ENST00000542791 SPATA31A7Q8IWB4 1347 aa11.22□□□□□ -0.61
MRPS35-205ENST00000542791 CCDC9Q9Y3X0 531 aaKnown RBP11.22□□□□□ -0.61
MRPS35-205ENST00000542791 BRD4O60885 1362 aaPredicted RBP11.21□□□□□ -0.61
MRPS35-205ENST00000542791 ROCK2O75116 1388 aaKnown RBP11.21□□□□□ -0.61
MRPS35-205ENST00000542791 FAM98CQ17RN3 349 aaKnown RBP11.21□□□□□ -0.61
MRPS35-205ENST00000542791 KRT27Q7Z3Y8 459 aa11.21□□□□□ -0.61
MRPS35-205ENST00000542791 CPDO75976 1380 aa11.2□□□□□ -0.62
MRPS35-205ENST00000542791 NUTM2GQ5VZR2 741 aa11.2□□□□□ -0.62
MRPS35-205ENST00000542791 ABTB2Q8N961 1025 aa11.2□□□□□ -0.62
MRPS35-205ENST00000542791 CABP1Q9NZU7 370 aa11.2□□□□□ -0.62
MRPS35-205ENST00000542791 TRPM1Q7Z4N2 1603 aa11.2□□□□□ -0.62
MRPS35-205ENST00000542791 EVC2Q86UK5 1308 aa11.19□□□□□ -0.62
MRPS35-205ENST00000542791 ZC3H6P61129 1189 aaKnown RBP11.19□□□□□ -0.62
MRPS35-205ENST00000542791 CHRNA2Q15822 529 aa11.19□□□□□ -0.62
MRPS35-205ENST00000542791 USP6P35125 1406 aa11.18□□□□□ -0.62
MRPS35-205ENST00000542791 SSH2Q76I76 1423 aa11.18□□□□□ -0.62
MRPS35-205ENST00000542791 QRICH2Q9H0J4 1663 aa11.18□□□□□ -0.62
MRPS35-205ENST00000542791 SPATA31A1Q5TZJ5 1347 aa11.18□□□□□ -0.62
MRPS35-205ENST00000542791 PHRF1Q9P1Y6 1649 aaKnown RBP11.18□□□□□ -0.62
MRPS35-205ENST00000542791 NRKQ7Z2Y5 1582 aa11.18□□□□□ -0.62
MRPS35-205ENST00000542791 SBNO2Q9Y2G9 1366 aa11.17□□□□□ -0.62
MRPS35-205ENST00000542791 BRWD3Q6RI45 1802 aa11.17□□□□□ -0.62
MRPS35-205ENST00000542791 GCP02774 474 aa11.17□□□□□ -0.62
MRPS35-205ENST00000542791 NLRP13Q86W25 1043 aa11.17□□□□□ -0.62
MRPS35-205ENST00000542791 A0A0G2JS52 829 aa11.16□□□□□ -0.62
MRPS35-205ENST00000542791 MYT1Q01538 1121 aa11.16□□□□□ -0.62
MRPS35-205ENST00000542791 DEFB132Q7Z7B7 95 aa11.16□□□□□ -0.62
MRPS35-205ENST00000542791 STRN4Q9NRL3 753 aa11.16□□□□□ -0.62
MRPS35-205ENST00000542791 ZRANB1Q9UGI0 708 aa11.16□□□□□ -0.62
MRPS35-205ENST00000542791 THSD7AQ9UPZ6 1657 aa11.16□□□□□ -0.62
MRPS35-205ENST00000542791 CAMTA1Q9Y6Y1 1673 aa11.15□□□□□ -0.62
MRPS35-205ENST00000542791 NLRP6P59044 892 aa11.14□□□□□ -0.63
MRPS35-205ENST00000542791 SF3B2Q13435 895 aaKnown RBP11.14□□□□□ -0.63
MRPS35-205ENST00000542791 BARGINQ6ZT62 677 aa11.14□□□□□ -0.63
MRPS35-205ENST00000542791 SLIT3O75094 1523 aa11.14□□□□□ -0.63
MRPS35-205ENST00000542791 LMO7Q8WWI1 1683 aa11.14□□□□□ -0.63
MRPS35-205ENST00000542791 CPSF1Q10570 1443 aaKnown RBP11.13□□□□□ -0.63
MRPS35-205ENST00000542791 LARP1Q6PKG0 1096 aaKnown RBP11.13□□□□□ -0.63
MRPS35-205ENST00000542791 ZNF692Q9BU19 519 aaPredicted RBP11.13□□□□□ -0.63
MRPS35-205ENST00000542791 CARD11Q9BXL7 1154 aa11.13□□□□□ -0.63
MRPS35-205ENST00000542791 AATKQ6ZMQ8 1374 aa11.13□□□□□ -0.63
MRPS35-205ENST00000542791 TONSLQ96HA7 1378 aa11.13□□□□□ -0.63
MRPS35-205ENST00000542791 COL5A2P05997 1499 aaPredicted RBP11.12□□□□□ -0.63
MRPS35-205ENST00000542791 TTC21BQ7Z4L5 1316 aa11.12□□□□□ -0.63
MRPS35-205ENST00000542791 EVA1CP58658 441 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms