RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 TBX22Q9Y458 520 aa18.63■□□□□ 0.57
LDB3-207ENST00000542786 EID1Q9Y6B2 187 aa18.63■□□□□ 0.57
LDB3-207ENST00000542786 NRKQ7Z2Y5 1582 aa18.63■□□□□ 0.57
LDB3-207ENST00000542786 CCDC27Q2M243 656 aa18.63■□□□□ 0.57
LDB3-207ENST00000542786 CCDC61Q9Y6R9 512 aa18.63■□□□□ 0.57
LDB3-207ENST00000542786 NCKAP5LQ9HCH0 1330 aa18.62■□□□□ 0.57
LDB3-207ENST00000542786 ITSN1Q15811 1721 aa18.62■□□□□ 0.57
LDB3-207ENST00000542786 RIMS1Q86UR5 1692 aaKnown RBP18.62■□□□□ 0.57
LDB3-207ENST00000542786 ADAMTSL3P82987 1691 aa18.61■□□□□ 0.57
LDB3-207ENST00000542786 PLIN1O60240 522 aa18.61■□□□□ 0.57
LDB3-207ENST00000542786 THEMISQ8N1K5 641 aaPredicted RBP18.61■□□□□ 0.57
LDB3-207ENST00000542786 CCDC136Q96JN2 1154 aa18.6■□□□□ 0.57
LDB3-207ENST00000542786 SLC26A8Q96RN1 970 aa18.6■□□□□ 0.57
LDB3-207ENST00000542786 PLEKHF1Q96S99 279 aa18.6■□□□□ 0.57
LDB3-207ENST00000542786 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.6■□□□□ 0.57
LDB3-207ENST00000542786 U2AF1L5P0DN76 240 aaPredicted RBP18.59■□□□□ 0.57
LDB3-207ENST00000542786 U2AF1Q01081 240 aaKnown RBP eCLIP18.59■□□□□ 0.57
LDB3-207ENST00000542786 ZNF142P52746 1687 aaPredicted RBP18.59■□□□□ 0.57
LDB3-207ENST00000542786 POLKQ9UBT6 870 aa18.58■□□□□ 0.57
LDB3-207ENST00000542786 RRP7AQ9Y3A4 280 aaKnown RBP18.58■□□□□ 0.57
LDB3-207ENST00000542786 AATKQ6ZMQ8 1374 aa18.58■□□□□ 0.57
LDB3-207ENST00000542786 C20orf194Q5TEA3 1177 aa18.57■□□□□ 0.56
LDB3-207ENST00000542786 NME9Q86XW9 330 aa18.57■□□□□ 0.56
LDB3-207ENST00000542786 WDR63Q8IWG1 891 aa18.57■□□□□ 0.56
LDB3-207ENST00000542786 CRBNQ96SW2 442 aa18.56■□□□□ 0.56
LDB3-207ENST00000542786 RBM19Q9Y4C8 960 aaKnown RBP18.56■□□□□ 0.56
LDB3-207ENST00000542786 CDK12Q9NYV4 1490 aaPredicted RBP18.56■□□□□ 0.56
LDB3-207ENST00000542786 PLEKHG3A1L390 1219 aa18.56■□□□□ 0.56
LDB3-207ENST00000542786 AMOTL2Q9Y2J4 779 aa18.56■□□□□ 0.56
LDB3-207ENST00000542786 SSH2Q76I76 1423 aa18.54■□□□□ 0.56
LDB3-207ENST00000542786 ZRANB1Q9UGI0 708 aa18.54■□□□□ 0.56
LDB3-207ENST00000542786 MAP2P11137 1827 aaKnown RBP18.54■□□□□ 0.56
LDB3-207ENST00000542786 LRRC7Q96NW7 1537 aa18.54■□□□□ 0.56
LDB3-207ENST00000542786 PIK3R4Q99570 1358 aa18.54■□□□□ 0.56
LDB3-207ENST00000542786 DIAPH1O60610 1272 aaKnown RBP18.54■□□□□ 0.56
LDB3-207ENST00000542786 PLPPR3Q6T4P5 718 aa18.54■□□□□ 0.56
LDB3-207ENST00000542786 ZNF692Q9BU19 519 aaPredicted RBP18.54■□□□□ 0.56
LDB3-207ENST00000542786 FBLN1P23142 703 aa18.53■□□□□ 0.56
LDB3-207ENST00000542786 USP6P35125 1406 aa18.52■□□□□ 0.56
LDB3-207ENST00000542786 NALCNQ8IZF0 1738 aa18.52■□□□□ 0.55
LDB3-207ENST00000542786 OVOS2A0A0J9YW53 1432 aa18.51■□□□□ 0.55
LDB3-207ENST00000542786 OVOS2Q6IE36 1432 aa18.51■□□□□ 0.55
LDB3-207ENST00000542786 U2SURPO15042 1029 aaKnown RBP18.51■□□□□ 0.55
LDB3-207ENST00000542786 NEUROD2Q15784 382 aa18.51■□□□□ 0.55
LDB3-207ENST00000542786 TMPOP42166 694 aaKnown RBP18.5■□□□□ 0.55
LDB3-207ENST00000542786 TRIM35Q9UPQ4 493 aa18.5■□□□□ 0.55
LDB3-207ENST00000542786 ACEP12821 1306 aa18.5■□□□□ 0.55
LDB3-207ENST00000542786 TTC21BQ7Z4L5 1316 aa18.5■□□□□ 0.55
LDB3-207ENST00000542786 EMILIN1Q9Y6C2 1016 aa18.5■□□□□ 0.55
LDB3-207ENST00000542786 BCAR3O75815 825 aa18.49■□□□□ 0.55
LDB3-207ENST00000542786 RSPH6AQ9H0K4 717 aa18.48■□□□□ 0.55
LDB3-207ENST00000542786 FCHSD2O94868 740 aa18.48■□□□□ 0.55
LDB3-207ENST00000542786 IL13P35225 146 aa18.48■□□□□ 0.55
LDB3-207ENST00000542786 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.48■□□□□ 0.55
LDB3-207ENST00000542786 COG3Q96JB2 828 aa18.47■□□□□ 0.55
LDB3-207ENST00000542786 ANKARQ7Z5J8 1434 aa18.47■□□□□ 0.55
LDB3-207ENST00000542786 FMN2Q9NZ56 1722 aa18.46■□□□□ 0.55
LDB3-207ENST00000542786 USP31Q70CQ4 1352 aa18.46■□□□□ 0.55
LDB3-207ENST00000542786 IL16Q14005 1332 aa18.45■□□□□ 0.54
LDB3-207ENST00000542786 CHD2O14647 1828 aaKnown RBP18.45■□□□□ 0.54
LDB3-207ENST00000542786 KCNA6P17658 529 aa18.45■□□□□ 0.54
LDB3-207ENST00000542786 RGPD8O14715 1765 aaPredicted RBP18.44■□□□□ 0.54
LDB3-207ENST00000542786 RARSP54136 660 aaKnown RBP18.44■□□□□ 0.54
LDB3-207ENST00000542786 KDM2BQ8NHM5 1336 aa18.44■□□□□ 0.54
LDB3-207ENST00000542786 MAPK8IP3Q9UPT6 1336 aa18.44■□□□□ 0.54
LDB3-207ENST00000542786 PEAK1Q9H792 1746 aa18.44■□□□□ 0.54
LDB3-207ENST00000542786 MYH16Q9H6N6 1097 aa18.43■□□□□ 0.54
LDB3-207ENST00000542786 PNNQ9H307 717 aaKnown RBP18.43■□□□□ 0.54
LDB3-207ENST00000542786 NUTM2FA1L443 756 aa18.42■□□□□ 0.54
LDB3-207ENST00000542786 FANCIQ9NVI1 1328 aa18.42■□□□□ 0.54
LDB3-207ENST00000542786 SETD1BQ9UPS6 1966 aaKnown RBP18.42■□□□□ 0.54
LDB3-207ENST00000542786 PPM1GO15355 546 aaPredicted RBP18.41■□□□□ 0.54
LDB3-207ENST00000542786 PRKAR2BP31323 418 aa18.41■□□□□ 0.54
LDB3-207ENST00000542786 PDE3AQ14432 1141 aa18.41■□□□□ 0.54
LDB3-207ENST00000542786 RRS1Q15050 365 aaKnown RBP18.41■□□□□ 0.54
LDB3-207ENST00000542786 ANKLE2Q86XL3 938 aa18.41■□□□□ 0.54
LDB3-207ENST00000542786 TTC21AQ8NDW8 1320 aa18.41■□□□□ 0.54
LDB3-207ENST00000542786 PIK3C2AO00443 1686 aa18.4■□□□□ 0.54
LDB3-207ENST00000542786 USP54Q70EL1 1684 aa18.4■□□□□ 0.54
LDB3-207ENST00000542786 RGPD1P0DJD0 1748 aa18.4■□□□□ 0.54
LDB3-207ENST00000542786 RIPK4P57078 832 aa18.39■□□□□ 0.54
LDB3-207ENST00000542786 PHACTR3Q96KR7 559 aa18.39■□□□□ 0.54
LDB3-207ENST00000542786 CT47B1P0C2W7 299 aaPredicted RBP18.39■□□□□ 0.53
LDB3-207ENST00000542786 MARF1Q9Y4F3 1742 aaKnown RBP18.39■□□□□ 0.53
LDB3-207ENST00000542786 NFE2L2Q16236 605 aa18.37■□□□□ 0.53
LDB3-207ENST00000542786 TSR2Q969E8 191 aaKnown RBP18.37■□□□□ 0.53
LDB3-207ENST00000542786 HMOX1P09601 288 aa18.36■□□□□ 0.53
LDB3-207ENST00000542786 PMFBP1Q8TBY8 1022 aa18.35■□□□□ 0.53
LDB3-207ENST00000542786 NPHP4O75161 1426 aaPredicted RBP18.34■□□□□ 0.53
LDB3-207ENST00000542786 TCERG1O14776 1098 aaKnown RBP18.34■□□□□ 0.53
LDB3-207ENST00000542786 EXOSC9Q06265 439 aaKnown RBP18.34■□□□□ 0.53
LDB3-207ENST00000542786 EIF4A2Q14240 407 aaKnown RBP18.34■□□□□ 0.53
LDB3-207ENST00000542786 NWD1Q149M9 1564 aa18.34■□□□□ 0.53
LDB3-207ENST00000542786 CENPQQ7L2Z9 268 aaPredicted RBP18.33■□□□□ 0.53
LDB3-207ENST00000542786 PANK1Q8TE04 598 aa18.33■□□□□ 0.53
LDB3-207ENST00000542786 ADGRL3Q9HAR2 1447 aa18.33■□□□□ 0.53
LDB3-207ENST00000542786 DLG5Q8TDM6 1919 aa18.32■□□□□ 0.52
LDB3-207ENST00000542786 RLBP1P12271 317 aa18.32■□□□□ 0.52
LDB3-207ENST00000542786 TNNQ9UQP3 1299 aa18.32■□□□□ 0.52
LDB3-207ENST00000542786 NGDNQ8NEJ9 315 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms