RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 TMEM2Q9UHN6 1383 aa21.69■■□□□ 1.06
NELFA-216ENST00000542778 IGHDP01880 384 aa21.68■■□□□ 1.06
NELFA-216ENST00000542778 GOLGA2Q08379 1002 aa21.67■■□□□ 1.06
NELFA-216ENST00000542778 NPC1L1Q9UHC9 1359 aa21.66■■□□□ 1.06
NELFA-216ENST00000542778 CDK19Q9BWU1 502 aa21.66■■□□□ 1.06
NELFA-216ENST00000542778 MAPK8IP3Q9UPT6 1336 aa21.66■■□□□ 1.06
NELFA-216ENST00000542778 MCM4P33991 863 aa21.65■■□□□ 1.06
NELFA-216ENST00000542778 A0A1W2PP64 1363 aa21.64■■□□□ 1.06
NELFA-216ENST00000542778 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.64■■□□□ 1.05
NELFA-216ENST00000542778 GZF1Q9H116 711 aaPredicted RBP21.64■■□□□ 1.05
NELFA-216ENST00000542778 SLC26A8Q96RN1 970 aa21.64■■□□□ 1.05
NELFA-216ENST00000542778 TBC1D2Q9BYX2 928 aa21.64■■□□□ 1.05
NELFA-216ENST00000542778 SLFN5Q08AF3 891 aa21.63■■□□□ 1.05
NELFA-216ENST00000542778 NCKAP5LQ9HCH0 1330 aa21.62■■□□□ 1.05
NELFA-216ENST00000542778 MRE11P49959 708 aa21.62■■□□□ 1.05
NELFA-216ENST00000542778 ANKRD36BQ8N2N9 1353 aa21.62■■□□□ 1.05
NELFA-216ENST00000542778 MORC1Q86VD1 984 aa21.62■■□□□ 1.05
NELFA-216ENST00000542778 CCDC146Q8IYE0 955 aa21.61■■□□□ 1.05
NELFA-216ENST00000542778 CD163L1Q9NR16 1453 aa21.61■■□□□ 1.05
NELFA-216ENST00000542778 CABP1Q9NZU7 370 aa21.61■■□□□ 1.05
NELFA-216ENST00000542778 ADAMTS13Q76LX8 1427 aa21.6■■□□□ 1.05
NELFA-216ENST00000542778 ESPNB1AK53 854 aa21.6■■□□□ 1.05
NELFA-216ENST00000542778 TRMT2AQ8IZ69 625 aaKnown RBP21.6■■□□□ 1.05
NELFA-216ENST00000542778 TBC1D32Q96NH3 1257 aa21.6■■□□□ 1.05
NELFA-216ENST00000542778 ABCC11Q96J66 1382 aa21.6■■□□□ 1.05
NELFA-216ENST00000542778 ERBB4Q15303 1308 aa21.59■■□□□ 1.05
NELFA-216ENST00000542778 WDR43Q15061 677 aaKnown RBP eCLIP21.58■■□□□ 1.05
NELFA-216ENST00000542778 BCAR3O75815 825 aa21.58■■□□□ 1.05
NELFA-216ENST00000542778 GGNBP2Q9H3C7 697 aa21.58■■□□□ 1.05
NELFA-216ENST00000542778 NKTRP30414 1462 aaKnown RBP21.57■■□□□ 1.04
NELFA-216ENST00000542778 TRAK2O60296 914 aa21.57■■□□□ 1.04
NELFA-216ENST00000542778 PUS7Q96PZ0 661 aaKnown RBP21.57■■□□□ 1.04
NELFA-216ENST00000542778 DLC1Q96QB1 1528 aa21.57■■□□□ 1.04
NELFA-216ENST00000542778 MYH16Q9H6N6 1097 aa21.56■■□□□ 1.04
NELFA-216ENST00000542778 UPF2Q9HAU5 1272 aaKnown RBP21.56■■□□□ 1.04
NELFA-216ENST00000542778 CGNL1Q0VF96 1302 aa21.56■■□□□ 1.04
NELFA-216ENST00000542778 RIMS1Q86UR5 1692 aaKnown RBP21.56■■□□□ 1.04
NELFA-216ENST00000542778 ROBO2Q9HCK4 1378 aa21.56■■□□□ 1.04
NELFA-216ENST00000542778 GRPEL1Q9HAV7 217 aa21.55■■□□□ 1.04
NELFA-216ENST00000542778 HDGFP51858 240 aaKnown RBP21.54■■□□□ 1.04
NELFA-216ENST00000542778 TPM2P07951 284 aa21.54■■□□□ 1.04
NELFA-216ENST00000542778 ATAD2Q6PL18 1390 aa21.53■■□□□ 1.04
NELFA-216ENST00000542778 CLUAP1Q96AJ1 413 aa21.53■■□□□ 1.04
NELFA-216ENST00000542778 SPINK5Q9NQ38 1064 aaPredicted RBP21.53■■□□□ 1.04
NELFA-216ENST00000542778 NUTM2FA1L443 756 aa21.53■■□□□ 1.04
NELFA-216ENST00000542778 FBLN1P23142 703 aa21.53■■□□□ 1.04
NELFA-216ENST00000542778 MTHFSP49914 203 aa21.53■■□□□ 1.04
NELFA-216ENST00000542778 USP32Q8NFA0 1604 aa21.53■■□□□ 1.04
NELFA-216ENST00000542778 PTPRUQ92729 1446 aa21.53■■□□□ 1.04
NELFA-216ENST00000542778 SPRYD3Q8NCJ5 442 aa21.52■■□□□ 1.04
NELFA-216ENST00000542778 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.51■■□□□ 1.032e-6■■■□□ 15.3
NELFA-216ENST00000542778 PDCL3Q9H2J4 239 aa21.51■■□□□ 1.03
NELFA-216ENST00000542778 PLEKHG1Q9ULL1 1385 aa21.51■■□□□ 1.03
NELFA-216ENST00000542778 WASLO00401 505 aaPredicted RBP21.51■■□□□ 1.03
NELFA-216ENST00000542778 FYB1O15117 783 aa21.51■■□□□ 1.03
NELFA-216ENST00000542778 PDE3AQ14432 1141 aa21.51■■□□□ 1.03
NELFA-216ENST00000542778 CHMP5Q9NZZ3 219 aa21.51■■□□□ 1.03
NELFA-216ENST00000542778 ISY1Q9ULR0 285 aaKnown RBP21.51■■□□□ 1.03
NELFA-216ENST00000542778 EID1Q9Y6B2 187 aa21.49■■□□□ 1.03
NELFA-216ENST00000542778 SHPRHQ149N8 1683 aa21.49■■□□□ 1.03
NELFA-216ENST00000542778 KNDC1Q76NI1 1749 aa21.48■■□□□ 1.03
NELFA-216ENST00000542778 TERF2IPQ9NYB0 399 aa21.48■■□□□ 1.03
NELFA-216ENST00000542778 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.48■■□□□ 1.03
NELFA-216ENST00000542778 ARHGAP23Q9P227 1491 aa21.48■■□□□ 1.03
NELFA-216ENST00000542778 NINLQ9Y2I6 1382 aa21.48■■□□□ 1.03
NELFA-216ENST00000542778 APAF1O14727 1248 aa21.47■■□□□ 1.03
NELFA-216ENST00000542778 SLIT1O75093 1534 aa21.47■■□□□ 1.03
NELFA-216ENST00000542778 CPS1P31327 1500 aa21.47■■□□□ 1.03
NELFA-216ENST00000542778 TECPR2O15040 1411 aa21.47■■□□□ 1.03
NELFA-216ENST00000542778 PRR36Q9H6K5 1346 aa21.46■■□□□ 1.03
NELFA-216ENST00000542778 MED14O60244 1454 aa21.46■■□□□ 1.03
NELFA-216ENST00000542778 COG6Q9Y2V7 657 aa21.46■■□□□ 1.03
NELFA-216ENST00000542778 POLR3AO14802 1390 aaPredicted RBP21.46■■□□□ 1.03
NELFA-216ENST00000542778 NUDT16Q96DE0 195 aaKnown RBP21.46■■□□□ 1.03
NELFA-216ENST00000542778 TRIM44Q96DX7 344 aaPredicted RBP21.46■■□□□ 1.03
NELFA-216ENST00000542778 ZRANB1Q9UGI0 708 aa21.46■■□□□ 1.03
NELFA-216ENST00000542778 DDX11L8A8MPP1 907 aa21.45■■□□□ 1.02
NELFA-216ENST00000542778 THEMISQ8N1K5 641 aaPredicted RBP21.45■■□□□ 1.02
NELFA-216ENST00000542778 PANK1Q8TE04 598 aa21.45■■□□□ 1.02
NELFA-216ENST00000542778 PPIP5K1Q6PFW1 1433 aa21.45■■□□□ 1.02
NELFA-216ENST00000542778 E9PSI1 815 aa21.45■■□□□ 1.02
NELFA-216ENST00000542778 HDGFL2Q7Z4V5 671 aaPredicted RBP21.45■■□□□ 1.02
NELFA-216ENST00000542778 PODXL2Q9NZ53 605 aa21.44■■□□□ 1.02
NELFA-216ENST00000542778 AMOTL2Q9Y2J4 779 aa21.44■■□□□ 1.02
NELFA-216ENST00000542778 FAM135BQ49AJ0 1406 aa21.44■■□□□ 1.02
NELFA-216ENST00000542778 DMRT2Q9Y5R5 561 aa21.43■■□□□ 1.02
NELFA-216ENST00000542778 CEP170BQ9Y4F5 1589 aaPredicted RBP21.42■■□□□ 1.02
NELFA-216ENST00000542778 CALD1Q05682 793 aaKnown RBP21.42■■□□□ 1.02
NELFA-216ENST00000542778 PMFBP1Q8TBY8 1022 aa21.41■■□□□ 1.02
NELFA-216ENST00000542778 RRP7AQ9Y3A4 280 aaKnown RBP21.41■■□□□ 1.02
NELFA-216ENST00000542778 CANXP27824 592 aaKnown RBP21.4■■□□□ 1.02
NELFA-216ENST00000542778 ZNF692Q9BU19 519 aaPredicted RBP21.4■■□□□ 1.02
NELFA-216ENST00000542778 PDZRN3Q9UPQ7 1066 aa21.4■■□□□ 1.02
NELFA-216ENST00000542778 ADAMTSL3P82987 1691 aa21.4■■□□□ 1.02
NELFA-216ENST00000542778 NSD2O96028 1365 aa21.4■■□□□ 1.02
NELFA-216ENST00000542778 NEUROD2Q15784 382 aa21.39■■□□□ 1.02
NELFA-216ENST00000542778 KIAA1211Q6ZU35 1233 aa21.39■■□□□ 1.02
NELFA-216ENST00000542778 NME9Q86XW9 330 aa21.39■■□□□ 1.02
NELFA-216ENST00000542778 RBM33Q96EV2 1170 aaKnown RBP21.39■■□□□ 1.02
NELFA-216ENST00000542778 KIF20BQ96Q89 1820 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms