RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 EHBP1Q8NDI1 1231 aa11.36□□□□□ -0.59
XRCC4-206ENST00000542685 MAP10Q9P2G4 905 aa11.36□□□□□ -0.59
XRCC4-206ENST00000542685 SMPD1P17405 629 aa11.35□□□□□ -0.59
XRCC4-206ENST00000542685 AAASQ9NRG9 546 aa11.35□□□□□ -0.59
XRCC4-206ENST00000542685 PLEKHG3A1L390 1219 aa11.34□□□□□ -0.59
XRCC4-206ENST00000542685 SKIV2LQ15477 1246 aaKnown RBP11.34□□□□□ -0.59
XRCC4-206ENST00000542685 SH3D19Q5HYK7 790 aa11.33□□□□□ -0.6
XRCC4-206ENST00000542685 HELBQ8NG08 1087 aaPredicted RBP11.33□□□□□ -0.6
XRCC4-206ENST00000542685 ALDH1A1P00352 501 aa11.32□□□□□ -0.6
XRCC4-206ENST00000542685 F12P00748 615 aaPredicted RBP11.32□□□□□ -0.6
XRCC4-206ENST00000542685 AVPP01185 164 aa11.32□□□□□ -0.6
XRCC4-206ENST00000542685 ZNF511Q8NB15 262 aa11.32□□□□□ -0.6
XRCC4-206ENST00000542685 PROCA1Q8NCQ7 364 aaPredicted RBP11.32□□□□□ -0.6
XRCC4-206ENST00000542685 AXIN1O15169 862 aa11.31□□□□□ -0.6
XRCC4-206ENST00000542685 NEUROD2Q15784 382 aa11.31□□□□□ -0.6
XRCC4-206ENST00000542685 SIAH2O43255 324 aa11.3□□□□□ -0.6
XRCC4-206ENST00000542685 TPRNQ4KMQ1 711 aa11.29□□□□□ -0.6
XRCC4-206ENST00000542685 CRIPAKQ8N1N5 446 aa11.29□□□□□ -0.6
XRCC4-206ENST00000542685 HPS1Q92902 700 aa11.29□□□□□ -0.6
XRCC4-206ENST00000542685 DACH1Q9UI36 760 aa11.29□□□□□ -0.6
XRCC4-206ENST00000542685 POTECB2RU33 542 aa11.28□□□□□ -0.6
XRCC4-206ENST00000542685 CTC1Q2NKJ3 1217 aa11.28□□□□□ -0.6
XRCC4-206ENST00000542685 CTDSPL2Q05D32 466 aa11.27□□□□□ -0.61
XRCC4-206ENST00000542685 FBXO31Q5XUX0 539 aaPredicted RBP11.27□□□□□ -0.61
XRCC4-206ENST00000542685 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.26□□□□□ -0.61
XRCC4-206ENST00000542685 VARSP26640 1264 aaKnown RBP11.25□□□□□ -0.61
XRCC4-206ENST00000542685 SMCPP49901 116 aaPredicted RBP11.25□□□□□ -0.61
XRCC4-206ENST00000542685 FOXJ1Q92949 421 aa11.25□□□□□ -0.61
XRCC4-206ENST00000542685 TLL2Q9Y6L7 1015 aa11.25□□□□□ -0.61
XRCC4-206ENST00000542685 WASF2Q9Y6W5 498 aa11.25□□□□□ -0.61
XRCC4-206ENST00000542685 AGERQ15109 404 aa11.24□□□□□ -0.61
XRCC4-206ENST00000542685 IL27Q8NEV9 243 aa11.24□□□□□ -0.61
XRCC4-206ENST00000542685 BRPF1P55201 1214 aaPredicted RBP11.21□□□□□ -0.61
XRCC4-206ENST00000542685 PPP2R2DQ66LE6 453 aa11.21□□□□□ -0.61
XRCC4-206ENST00000542685 ARMC2Q8NEN0 867 aa11.21□□□□□ -0.61
XRCC4-206ENST00000542685 LRRN4Q8WUT4 740 aa11.21□□□□□ -0.61
XRCC4-206ENST00000542685 AP1G2O75843 785 aa11.2□□□□□ -0.62
XRCC4-206ENST00000542685 FAM174AQ8TBP5 190 aa11.2□□□□□ -0.62
XRCC4-206ENST00000542685 GMPR2Q9P2T1 348 aaKnown RBP11.2□□□□□ -0.62
XRCC4-206ENST00000542685 ARID5BQ14865 1188 aa11.19□□□□□ -0.62
XRCC4-206ENST00000542685 C4orf48Q5BLP8 95 aa11.19□□□□□ -0.62
XRCC4-206ENST00000542685 BPHLQ86WA6 291 aaPredicted RBP11.19□□□□□ -0.62
XRCC4-206ENST00000542685 NBPF14Q5TI25 921 aa11.18□□□□□ -0.62
XRCC4-206ENST00000542685 PCMTD1Q96MG8 357 aaPredicted RBP11.17□□□□□ -0.62
XRCC4-206ENST00000542685 ATP13A2Q9NQ11 1180 aa11.17□□□□□ -0.62
XRCC4-206ENST00000542685 C11orf95C9JLR9 678 aaPredicted RBP11.16□□□□□ -0.62
XRCC4-206ENST00000542685 MAGEB6P1A0A0J9YX57 407 aa11.15□□□□□ -0.62
XRCC4-206ENST00000542685 NNTQ13423 1086 aa11.15□□□□□ -0.62
XRCC4-206ENST00000542685 NR6A1Q15406 480 aa11.15□□□□□ -0.62
XRCC4-206ENST00000542685 MPNDQ8N594 471 aa11.15□□□□□ -0.62
XRCC4-206ENST00000542685 ZNF775Q96BV0 537 aaPredicted RBP11.15□□□□□ -0.62
XRCC4-206ENST00000542685 GOPCQ9HD26 462 aa11.15□□□□□ -0.62
XRCC4-206ENST00000542685 CAPN5O15484 640 aaPredicted RBP11.14□□□□□ -0.63
XRCC4-206ENST00000542685 RFC5P40937 340 aa11.14□□□□□ -0.63
XRCC4-206ENST00000542685 ADH1CP00326 375 aa11.13□□□□□ -0.63
XRCC4-206ENST00000542685 SH3BP5LQ7L8J4 393 aa11.13□□□□□ -0.63
XRCC4-206ENST00000542685 CARD14Q9BXL6 1004 aa11.13□□□□□ -0.63
XRCC4-206ENST00000542685 SH3RF1Q7Z6J0 888 aa11.12□□□□□ -0.63
XRCC4-206ENST00000542685 CDK15Q96Q40 435 aa11.12□□□□□ -0.63
XRCC4-206ENST00000542685 FKBPLQ9UIM3 349 aa11.12□□□□□ -0.63
XRCC4-206ENST00000542685 USP17L8P0C7I0 530 aa11.11□□□□□ -0.63
XRCC4-206ENST00000542685 GPKOWQ92917 476 aaPredicted RBP eCLIP11.11□□□□□ -0.63
XRCC4-206ENST00000542685 BMP1P13497 986 aa11.1□□□□□ -0.63
XRCC4-206ENST00000542685 EPS8L1Q8TE68 723 aa11.1□□□□□ -0.63
XRCC4-206ENST00000542685 HMX1Q9NP08 348 aaPredicted RBP11.1□□□□□ -0.63
XRCC4-206ENST00000542685 C1QTNF2Q9BXJ5 285 aa11.09□□□□□ -0.63
XRCC4-206ENST00000542685 SNRPBP14678 240 aaKnown RBP11.08□□□□□ -0.64
XRCC4-206ENST00000542685 WDR4P57081 412 aaKnown RBP11.08□□□□□ -0.64
XRCC4-206ENST00000542685 ARHGAP9Q9BRR9 750 aa11.08□□□□□ -0.64
XRCC4-206ENST00000542685 SENP2Q9HC62 589 aa11.08□□□□□ -0.64
XRCC4-206ENST00000542685 GRM5P41594 1212 aa11.07□□□□□ -0.64
XRCC4-206ENST00000542685 PDXDC2PQ6P474 469 aa11.07□□□□□ -0.64
XRCC4-206ENST00000542685 VASH1Q7L8A9 365 aaPredicted RBP11.07□□□□□ -0.64
XRCC4-206ENST00000542685 NR3C2P08235 984 aa11.06□□□□□ -0.64
XRCC4-206ENST00000542685 TIMP2P16035 220 aa11.06□□□□□ -0.64
XRCC4-206ENST00000542685 NR5A1Q13285 461 aa11.06□□□□□ -0.64
XRCC4-206ENST00000542685 TRIM46Q7Z4K8 759 aa11.06□□□□□ -0.64
XRCC4-206ENST00000542685 TRIM47Q96LD4 638 aa11.06□□□□□ -0.64
XRCC4-206ENST00000542685 FSHRP23945 695 aa11.05□□□□□ -0.64
XRCC4-206ENST00000542685 ERFEQ4G0M1 354 aa11.05□□□□□ -0.64
XRCC4-206ENST00000542685 TMEM259Q4ZIN3 620 aa11.05□□□□□ -0.64
XRCC4-206ENST00000542685 TRMT44Q8IYL2 757 aaKnown RBP11.05□□□□□ -0.64
XRCC4-206ENST00000542685 PRKCSHP14314 528 aaPredicted RBP11.04□□□□□ -0.64
XRCC4-206ENST00000542685 ZBTB33Q86T24 672 aa11.04□□□□□ -0.64
XRCC4-206ENST00000542685 KIFC2Q96AC6 838 aa11.04□□□□□ -0.64
XRCC4-206ENST00000542685 KLF16Q9BXK1 252 aaPredicted RBP11.04□□□□□ -0.64
XRCC4-206ENST00000542685 ZC3H4Q9UPT8 1303 aaKnown RBP11.04□□□□□ -0.64
XRCC4-206ENST00000542685 ZIC2O95409 532 aaPredicted RBP11.03□□□□□ -0.64
XRCC4-206ENST00000542685 PTK2Q05397 1052 aa11.03□□□□□ -0.64
XRCC4-206ENST00000542685 PNMA1Q8ND90 353 aa11.03□□□□□ -0.64
XRCC4-206ENST00000542685 ITPKCQ96DU7 683 aa11.03□□□□□ -0.64
XRCC4-206ENST00000542685 MAP4K5Q9Y4K4 846 aa11.03□□□□□ -0.64
XRCC4-206ENST00000542685 ZFAND3Q9H8U3 227 aa11.02□□□□□ -0.65
XRCC4-206ENST00000542685 SLC10A4Q96EP9 437 aa11.01□□□□□ -0.65
XRCC4-206ENST00000542685 MRPL14Q6P1L8 145 aaKnown RBP11□□□□□ -0.65
XRCC4-206ENST00000542685 ZFP42Q96MM3 310 aa11□□□□□ -0.65
XRCC4-206ENST00000542685 OCSTAMPQ9BR26 566 aa11□□□□□ -0.65
XRCC4-206ENST00000542685 TRIM34Q9BYJ4 488 aa10.99□□□□□ -0.65
XRCC4-206ENST00000542685 SCARF1Q14162 830 aa10.98□□□□□ -0.65
XRCC4-206ENST00000542685 CCDC116Q8IYX3 515 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms