RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 TNNQ9UQP3 1299 aa12.72□□□□□ -0.37
TOP3A-208ENST00000542570 PTCD1O75127 700 aaKnown RBP12.71□□□□□ -0.38
TOP3A-208ENST00000542570 MYL6BP14649 208 aa12.71□□□□□ -0.38
TOP3A-208ENST00000542570 PPP6R1Q9UPN7 881 aa12.71□□□□□ -0.38
TOP3A-208ENST00000542570 FCHSD2O94868 740 aa12.7□□□□□ -0.38
TOP3A-208ENST00000542570 ANXA1P04083 346 aa12.7□□□□□ -0.38
TOP3A-208ENST00000542570 HSP90AB1P08238 724 aaKnown RBP12.7□□□□□ -0.38
TOP3A-208ENST00000542570 CENPQQ7L2Z9 268 aaPredicted RBP12.7□□□□□ -0.38
TOP3A-208ENST00000542570 KRT28Q7Z3Y7 464 aa12.7□□□□□ -0.38
TOP3A-208ENST00000542570 SSH1Q8WYL5 1049 aa12.7□□□□□ -0.38
TOP3A-208ENST00000542570 DDRGK1Q96HY6 314 aa12.7□□□□□ -0.38
TOP3A-208ENST00000542570 POLKQ9UBT6 870 aa12.7□□□□□ -0.38
TOP3A-208ENST00000542570 PLEKHH1Q9ULM0 1364 aa12.7□□□□□ -0.38
TOP3A-208ENST00000542570 KRT24Q2M2I5 525 aa12.7□□□□□ -0.38
TOP3A-208ENST00000542570 PHACTR3Q96KR7 559 aa12.7□□□□□ -0.38
TOP3A-208ENST00000542570 RBM42Q9BTD8 480 aaKnown RBP12.7□□□□□ -0.38
TOP3A-208ENST00000542570 DMRT2Q9Y5R5 561 aa12.7□□□□□ -0.38
TOP3A-208ENST00000542570 FGD1P98174 961 aa12.7□□□□□ -0.38
TOP3A-208ENST00000542570 LRRC59Q96AG4 307 aaKnown RBP12.7□□□□□ -0.38
TOP3A-208ENST00000542570 GTF2E1P29083 439 aaPredicted RBP12.69□□□□□ -0.38
TOP3A-208ENST00000542570 DDX19BQ9UMR2 479 aa12.69□□□□□ -0.38
TOP3A-208ENST00000542570 TAF7LQ5H9L4 462 aa12.69□□□□□ -0.38
TOP3A-208ENST00000542570 DUSP27Q5VZP5 1158 aa12.69□□□□□ -0.38
TOP3A-208ENST00000542570 F6X3S4 739 aa12.69□□□□□ -0.38
TOP3A-208ENST00000542570 HDGFL1Q5TGJ6 251 aa12.69□□□□□ -0.38
TOP3A-208ENST00000542570 NFE2L2Q16236 605 aa12.69□□□□□ -0.38
TOP3A-208ENST00000542570 PLA2R1Q13018 1463 aa12.68□□□□□ -0.38
TOP3A-208ENST00000542570 TTC21BQ7Z4L5 1316 aa12.68□□□□□ -0.38
TOP3A-208ENST00000542570 GORABQ5T7V8 394 aa12.68□□□□□ -0.38
TOP3A-208ENST00000542570 ATP10AO60312 1499 aa12.67□□□□□ -0.38
TOP3A-208ENST00000542570 ZCCHC11Q5TAX3 1644 aaKnown RBP12.67□□□□□ -0.38
TOP3A-208ENST00000542570 MSH5O43196 834 aa12.67□□□□□ -0.38
TOP3A-208ENST00000542570 FOXD4L5Q5VV16 416 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-208ENST00000542570 GAS2L2Q8NHY3 880 aa12.67□□□□□ -0.38
TOP3A-208ENST00000542570 FOXD4L4Q8WXT5 416 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-208ENST00000542570 A0A1W2PP64 1363 aa12.67□□□□□ -0.38
TOP3A-208ENST00000542570 HMMRO75330 724 aa12.67□□□□□ -0.38
TOP3A-208ENST00000542570 PLEKHO1Q53GL0 409 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-208ENST00000542570 MEX3CQ5U5Q3 659 aaKnown RBP12.67□□□□□ -0.38
TOP3A-208ENST00000542570 RIC3Q7Z5B4 369 aa12.67□□□□□ -0.38
TOP3A-208ENST00000542570 API5Q9BZZ5 524 aaKnown RBP12.66□□□□□ -0.38
TOP3A-208ENST00000542570 TMEM57Q8N5G2 664 aa12.66□□□□□ -0.38
TOP3A-208ENST00000542570 CCDC85AQ96PX6 553 aaPredicted RBP12.66□□□□□ -0.38
TOP3A-208ENST00000542570 PIP4K2AP48426 406 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-208ENST00000542570 PPIP5K1Q6PFW1 1433 aa12.65□□□□□ -0.38
TOP3A-208ENST00000542570 TATP17735 454 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-208ENST00000542570 RARSP54136 660 aaKnown RBP12.65□□□□□ -0.38
TOP3A-208ENST00000542570 FOXD4L6Q3SYB3 417 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-208ENST00000542570 FOXD4L3Q6VB84 417 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-208ENST00000542570 ATF7IPQ6VMQ6 1270 aa12.64□□□□□ -0.39
TOP3A-208ENST00000542570 ANP32EQ9BTT0 268 aa12.64□□□□□ -0.39
TOP3A-208ENST00000542570 YTHDC2Q9H6S0 1430 aaKnown RBP12.64□□□□□ -0.39
TOP3A-208ENST00000542570 WDR63Q8IWG1 891 aa12.64□□□□□ -0.39
TOP3A-208ENST00000542570 KIF16BQ96L93 1317 aa12.64□□□□□ -0.39
TOP3A-208ENST00000542570 FANCIQ9NVI1 1328 aa12.64□□□□□ -0.39
TOP3A-208ENST00000542570 GZF1Q9H116 711 aaPredicted RBP12.64□□□□□ -0.39
TOP3A-208ENST00000542570 PDZRN3Q9UPQ7 1066 aa12.64□□□□□ -0.39
TOP3A-208ENST00000542570 NEXNQ0ZGT2 675 aa12.63□□□□□ -0.39
TOP3A-208ENST00000542570 EIF4A2Q14240 407 aaKnown RBP12.63□□□□□ -0.39
TOP3A-208ENST00000542570 JARID2Q92833 1246 aaPredicted RBP12.63□□□□□ -0.39
TOP3A-208ENST00000542570 BTBD11A6QL63 1104 aa12.62□□□□□ -0.39
TOP3A-208ENST00000542570 HSCBQ8IWL3 235 aa12.62□□□□□ -0.39
TOP3A-208ENST00000542570 METP08581 1390 aa12.62□□□□□ -0.39
TOP3A-208ENST00000542570 SMG6Q86US8 1419 aaKnown RBP12.62□□□□□ -0.39
TOP3A-208ENST00000542570 FAM161AQ3B820 660 aa12.62□□□□□ -0.39
TOP3A-208ENST00000542570 PARD3Q8TEW0 1356 aa12.62□□□□□ -0.39
TOP3A-208ENST00000542570 CABP4P57796 275 aa12.62□□□□□ -0.39
TOP3A-208ENST00000542570 TSPYL6Q8N831 410 aa12.62□□□□□ -0.39
TOP3A-208ENST00000542570 SIL1Q9H173 461 aa12.62□□□□□ -0.39
TOP3A-208ENST00000542570 GNAT3A8MTJ3 354 aa12.61□□□□□ -0.39
TOP3A-208ENST00000542570 KIAA1211Q6ZU35 1233 aa12.61□□□□□ -0.39
TOP3A-208ENST00000542570 ANKRD36BQ8N2N9 1353 aa12.61□□□□□ -0.39
TOP3A-208ENST00000542570 MYO5CQ9NQX4 1742 aa12.61□□□□□ -0.39
TOP3A-208ENST00000542570 SURF6O75683 361 aaKnown RBP12.61□□□□□ -0.39
TOP3A-208ENST00000542570 SLC39A6Q13433 755 aa12.61□□□□□ -0.39
TOP3A-208ENST00000542570 SPATA31E1Q6ZUB1 1445 aa12.61□□□□□ -0.39
TOP3A-208ENST00000542570 IPO9Q96P70 1041 aaKnown RBP12.6□□□□□ -0.39
TOP3A-208ENST00000542570 UBTFL1P0CB47 393 aaPredicted RBP12.6□□□□□ -0.39
TOP3A-208ENST00000542570 CCDC30Q5VVM6 783 aa12.6□□□□□ -0.39
TOP3A-208ENST00000542570 MBIPQ9NS73 344 aa12.6□□□□□ -0.39
TOP3A-208ENST00000542570 MAST1Q9Y2H9 1570 aa12.6□□□□□ -0.39
TOP3A-208ENST00000542570 MAP3K19Q56UN5 1328 aa12.59□□□□□ -0.39
TOP3A-208ENST00000542570 IL1RAPL2Q9NP60 686 aa12.59□□□□□ -0.39
TOP3A-208ENST00000542570 TBX22Q9Y458 520 aa12.59□□□□□ -0.39
TOP3A-208ENST00000542570 ABCC1P33527 1531 aa12.59□□□□□ -0.39
TOP3A-208ENST00000542570 MAP4K4O95819 1239 aaPredicted RBP12.59□□□□□ -0.39
TOP3A-208ENST00000542570 C8orf58Q8NAV2 365 aa12.59□□□□□ -0.39
TOP3A-208ENST00000542570 TRIM27P14373 513 aa12.59□□□□□ -0.39
TOP3A-208ENST00000542570 ANKRD24Q8TF21 1146 aa12.59□□□□□ -0.39
TOP3A-208ENST00000542570 CDC42BPAQ5VT25 1732 aa12.59□□□□□ -0.39
TOP3A-208ENST00000542570 NEUROD6Q96NK8 337 aa12.58□□□□□ -0.4
TOP3A-208ENST00000542570 EXOC6BQ9Y2D4 811 aa12.58□□□□□ -0.4
TOP3A-208ENST00000542570 FRAT2O75474 233 aaPredicted RBP12.58□□□□□ -0.4
TOP3A-208ENST00000542570 MVPQ14764 893 aaKnown RBP12.58□□□□□ -0.4
TOP3A-208ENST00000542570 EYA1Q99502 592 aa12.58□□□□□ -0.4
TOP3A-208ENST00000542570 PDE3AQ14432 1141 aa12.58□□□□□ -0.4
TOP3A-208ENST00000542570 KCNH5Q8NCM2 988 aa12.58□□□□□ -0.4
TOP3A-208ENST00000542570 LRRIQ1Q96JM4 1722 aa12.58□□□□□ -0.4
TOP3A-208ENST00000542570 NEO1Q92859 1461 aa12.58□□□□□ -0.4
TOP3A-208ENST00000542570 SMARCA5O60264 1052 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms