RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 CARD14Q9BXL6 1004 aa6.81□□□□□ -1.32
ATPAF1-212ENST00000542495 FRMPD1Q5SYB0 1578 aa6.8□□□□□ -1.32
ATPAF1-212ENST00000542495 GALR2O43603 387 aaPredicted RBP6.8□□□□□ -1.32
ATPAF1-212ENST00000542495 POLR3AO14802 1390 aaPredicted RBP6.8□□□□□ -1.32
ATPAF1-212ENST00000542495 PPLO60437 1756 aa6.8□□□□□ -1.32
ATPAF1-212ENST00000542495 MLH3Q9UHC1 1453 aa6.8□□□□□ -1.32
ATPAF1-212ENST00000542495 ADGRB1O14514 1584 aa6.8□□□□□ -1.32
ATPAF1-212ENST00000542495 CFAP74Q9C0B2 1584 aa6.8□□□□□ -1.32
ATPAF1-212ENST00000542495 USP32Q8NFA0 1604 aa6.8□□□□□ -1.32
ATPAF1-212ENST00000542495 CENPQQ7L2Z9 268 aaPredicted RBP6.8□□□□□ -1.32
ATPAF1-212ENST00000542495 NKTRP30414 1462 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-212ENST00000542495 NEO1Q92859 1461 aa6.79□□□□□ -1.32
ATPAF1-212ENST00000542495 DEKP35659 375 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-212ENST00000542495 LMOD2Q6P5Q4 547 aa6.79□□□□□ -1.32
ATPAF1-212ENST00000542495 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.79□□□□□ -1.32
ATPAF1-212ENST00000542495 CADPS2Q86UW7 1296 aa6.79□□□□□ -1.32
ATPAF1-212ENST00000542495 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-212ENST00000542495 POGZQ7Z3K3 1410 aa6.79□□□□□ -1.32
ATPAF1-212ENST00000542495 SHPRHQ149N8 1683 aa6.79□□□□□ -1.32
ATPAF1-212ENST00000542495 PYGBP11216 843 aa6.78□□□□□ -1.32
ATPAF1-212ENST00000542495 C14orf93Q9H972 538 aaKnown RBP6.78□□□□□ -1.32
ATPAF1-212ENST00000542495 NOS1P29475 1434 aa6.78□□□□□ -1.32
ATPAF1-212ENST00000542495 NPATQ14207 1427 aa6.78□□□□□ -1.32
ATPAF1-212ENST00000542495 QRICH2Q9H0J4 1663 aa6.77□□□□□ -1.32
ATPAF1-212ENST00000542495 RPGRIP1LQ68CZ1 1315 aa6.77□□□□□ -1.33
ATPAF1-212ENST00000542495 CENPJQ9HC77 1338 aaPredicted RBP6.77□□□□□ -1.33
ATPAF1-212ENST00000542495 E9PSI1 815 aa6.77□□□□□ -1.33
ATPAF1-212ENST00000542495 APAF1O14727 1248 aa6.77□□□□□ -1.33
ATPAF1-212ENST00000542495 RAPGEF3O95398 923 aa6.77□□□□□ -1.33
ATPAF1-212ENST00000542495 POTEJP0CG39 1038 aa6.77□□□□□ -1.33
ATPAF1-212ENST00000542495 PUS7Q96PZ0 661 aaKnown RBP6.77□□□□□ -1.33
ATPAF1-212ENST00000542495 PIK3C2BO00750 1634 aa6.77□□□□□ -1.33
ATPAF1-212ENST00000542495 ABCC3O15438 1527 aa6.77□□□□□ -1.33
ATPAF1-212ENST00000542495 IQSEC2Q5JU85 1478 aa6.77□□□□□ -1.33
ATPAF1-212ENST00000542495 C14orf37Q86TY3 774 aa6.77□□□□□ -1.33
ATPAF1-212ENST00000542495 NINLQ9Y2I6 1382 aa6.76□□□□□ -1.33
ATPAF1-212ENST00000542495 SKAP1Q86WV1 359 aa6.76□□□□□ -1.33
ATPAF1-212ENST00000542495 CCDC146Q8IYE0 955 aa6.76□□□□□ -1.33
ATPAF1-212ENST00000542495 ADAMTSL3P82987 1691 aa6.76□□□□□ -1.33
ATPAF1-212ENST00000542495 PTPRMP28827 1452 aa6.76□□□□□ -1.33
ATPAF1-212ENST00000542495 NSD3Q9BZ95 1437 aa6.75□□□□□ -1.33
ATPAF1-212ENST00000542495 NPM2Q86SE8 214 aaKnown RBP6.75□□□□□ -1.33
ATPAF1-212ENST00000542495 DDRGK1Q96HY6 314 aa6.75□□□□□ -1.33
ATPAF1-212ENST00000542495 USP35Q9P2H5 1018 aa6.75□□□□□ -1.33
ATPAF1-212ENST00000542495 DAXXQ9UER7 740 aaPredicted RBP6.75□□□□□ -1.33
ATPAF1-212ENST00000542495 CAMSAP1Q5T5Y3 1602 aa6.75□□□□□ -1.33
ATPAF1-212ENST00000542495 SIGLEC1Q9BZZ2 1709 aa6.75□□□□□ -1.33
ATPAF1-212ENST00000542495 BRPF1P55201 1214 aaPredicted RBP6.74□□□□□ -1.33
ATPAF1-212ENST00000542495 PDE3AQ14432 1141 aa6.74□□□□□ -1.33
ATPAF1-212ENST00000542495 C8orf34Q49A92 452 aa6.74□□□□□ -1.33
ATPAF1-212ENST00000542495 WWC1Q8IX03 1113 aa6.74□□□□□ -1.33
ATPAF1-212ENST00000542495 ZRANB1Q9UGI0 708 aa6.74□□□□□ -1.33
ATPAF1-212ENST00000542495 NEXMIFQ5QGS0 1516 aa6.74□□□□□ -1.33
ATPAF1-212ENST00000542495 ARHGEF28Q8N1W1 1705 aaKnown RBP6.74□□□□□ -1.33
ATPAF1-212ENST00000542495 ARHGAP31Q2M1Z3 1444 aa6.74□□□□□ -1.33
ATPAF1-212ENST00000542495 BCAR3O75815 825 aa6.74□□□□□ -1.33
ATPAF1-212ENST00000542495 FAM161AQ3B820 660 aa6.74□□□□□ -1.33
ATPAF1-212ENST00000542495 WDR70Q9NW82 654 aa6.74□□□□□ -1.33
ATPAF1-212ENST00000542495 ZFYVE9O95405 1425 aa6.74□□□□□ -1.33
ATPAF1-212ENST00000542495 NSD2O96028 1365 aa6.73□□□□□ -1.33
ATPAF1-212ENST00000542495 CGNL1Q0VF96 1302 aa6.73□□□□□ -1.33
ATPAF1-212ENST00000542495 TULP4Q9NRJ4 1543 aa6.73□□□□□ -1.33
ATPAF1-212ENST00000542495 PPM1GO15355 546 aaPredicted RBP6.73□□□□□ -1.33
ATPAF1-212ENST00000542495 CCDC27Q2M243 656 aa6.73□□□□□ -1.33
ATPAF1-212ENST00000542495 RUNDC1Q96C34 613 aa6.73□□□□□ -1.33
ATPAF1-212ENST00000542495 VIRMAQ69YN4 1812 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-212ENST00000542495 AAMPQ13685 434 aa6.72□□□□□ -1.33
ATPAF1-212ENST00000542495 RTL5Q5HYW3 569 aaPredicted RBP6.72□□□□□ -1.33
ATPAF1-212ENST00000542495 MORC1Q86VD1 984 aa6.72□□□□□ -1.33
ATPAF1-212ENST00000542495 WDR63Q8IWG1 891 aa6.72□□□□□ -1.33
ATPAF1-212ENST00000542495 FBXO41Q8TF61 875 aa6.72□□□□□ -1.33
ATPAF1-212ENST00000542495 SLC12A5Q9H2X9 1139 aa6.72□□□□□ -1.33
ATPAF1-212ENST00000542495 TRAK1Q9UPV9 953 aa6.72□□□□□ -1.33
ATPAF1-212ENST00000542495 ADGRB2O60241 1585 aa6.72□□□□□ -1.33
ATPAF1-212ENST00000542495 DIP2CQ9Y2E4 1556 aa6.72□□□□□ -1.33
ATPAF1-212ENST00000542495 ANKRD36BQ8N2N9 1353 aa6.72□□□□□ -1.33
ATPAF1-212ENST00000542495 RICTORQ6R327 1708 aa6.72□□□□□ -1.33
ATPAF1-212ENST00000542495 ARHGEF40Q8TER5 1519 aa6.71□□□□□ -1.33
ATPAF1-212ENST00000542495 IGHDP01880 384 aa6.71□□□□□ -1.34
ATPAF1-212ENST00000542495 ZMYM3Q14202 1370 aa6.71□□□□□ -1.34
ATPAF1-212ENST00000542495 EVC2Q86UK5 1308 aa6.7□□□□□ -1.34
ATPAF1-212ENST00000542495 RARSP54136 660 aaKnown RBP6.7□□□□□ -1.34
ATPAF1-212ENST00000542495 TMEM132EQ6IEE7 984 aa6.7□□□□□ -1.34
ATPAF1-212ENST00000542495 GGT6Q6P531 493 aa6.7□□□□□ -1.34
ATPAF1-212ENST00000542495 HOMEZQ8IX15 550 aa6.7□□□□□ -1.34
ATPAF1-212ENST00000542495 TCP11L2Q8N4U5 519 aa6.7□□□□□ -1.34
ATPAF1-212ENST00000542495 CLUAP1Q96AJ1 413 aa6.7□□□□□ -1.34
ATPAF1-212ENST00000542495 CFAP65Q6ZU64 1925 aaKnown RBP6.7□□□□□ -1.34
ATPAF1-212ENST00000542495 NEFMP07197 916 aa6.69□□□□□ -1.34
ATPAF1-212ENST00000542495 MTHFSP49914 203 aa6.69□□□□□ -1.34
ATPAF1-212ENST00000542495 LAS1LQ9Y4W2 734 aaKnown RBP6.69□□□□□ -1.34
ATPAF1-212ENST00000542495 ABCC11Q96J66 1382 aa6.69□□□□□ -1.34
ATPAF1-212ENST00000542495 MED14O60244 1454 aa6.69□□□□□ -1.34
ATPAF1-212ENST00000542495 COL3A1P02461 1466 aaPredicted RBP6.69□□□□□ -1.34
ATPAF1-212ENST00000542495 LMTK3Q96Q04 1460 aa6.69□□□□□ -1.34
ATPAF1-212ENST00000542495 CLTCQ00610 1675 aaKnown RBP6.69□□□□□ -1.34
ATPAF1-212ENST00000542495 RIMS1Q86UR5 1692 aaKnown RBP6.69□□□□□ -1.34
ATPAF1-212ENST00000542495 USP19O94966 1318 aa6.69□□□□□ -1.34
ATPAF1-212ENST00000542495 MAPK8IP3Q9UPT6 1336 aa6.69□□□□□ -1.34
ATPAF1-212ENST00000542495 ZC3H15Q8WU90 426 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms